RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 RIPK1Q13546 671 aa16.24■□□□□ 0.19
CAPN13-203ENST00000458085 CHRNA6Q15825 494 aa16.24■□□□□ 0.19
CAPN13-203ENST00000458085 SNCBQ16143 134 aa16.24■□□□□ 0.19
CAPN13-203ENST00000458085 LKAAEAR1Q8TD35 194 aa16.24■□□□□ 0.19
CAPN13-203ENST00000458085 SCRN2Q96FV2 425 aa16.24■□□□□ 0.19
CAPN13-203ENST00000458085 NSUN5Q96P11 429 aaKnown RBP16.24■□□□□ 0.19
CAPN13-203ENST00000458085 TUBGCP5Q96RT8 1024 aa16.24■□□□□ 0.19
CAPN13-203ENST00000458085 LYSMD1Q96S90 227 aa16.24■□□□□ 0.19
CAPN13-203ENST00000458085 CPEB1Q9BZB8 566 aaKnown RBP16.24■□□□□ 0.19
CAPN13-203ENST00000458085 CEP44Q9C0F1 390 aa16.24■□□□□ 0.19
CAPN13-203ENST00000458085 TRMT6Q9UJA5 497 aaKnown RBP16.24■□□□□ 0.19
CAPN13-203ENST00000458085 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.24■□□□□ 0.19
CAPN13-203ENST00000458085 PIKFYVEQ9Y2I7 2098 aa16.23■□□□□ 0.19
CAPN13-203ENST00000458085 CCDC189A1A4V9 331 aa16.23■□□□□ 0.19
CAPN13-203ENST00000458085 SPECC1L-ADORA2AF8WAN1 911 aa16.23■□□□□ 0.19
CAPN13-203ENST00000458085 PRMT5O14744 637 aaPredicted RBP16.23■□□□□ 0.19
CAPN13-203ENST00000458085 SMIM24O75264 130 aa16.23■□□□□ 0.19
CAPN13-203ENST00000458085 PYGLP06737 847 aa16.23■□□□□ 0.19
CAPN13-203ENST00000458085 TPBGLP0DKB5 382 aa16.23■□□□□ 0.19
CAPN13-203ENST00000458085 GM2AP17900 193 aa16.23■□□□□ 0.19
CAPN13-203ENST00000458085 CLCN7P51798 805 aa16.23■□□□□ 0.19
CAPN13-203ENST00000458085 ADARP55265 1226 aaKnown RBP16.23■□□□□ 0.19
CAPN13-203ENST00000458085 HERVK_113P63132 956 aa16.23■□□□□ 0.19
CAPN13-203ENST00000458085 PTSQ03393 145 aa16.23■□□□□ 0.19
CAPN13-203ENST00000458085 TBCCQ15814 346 aa16.23■□□□□ 0.19
CAPN13-203ENST00000458085 SNX20Q7Z614 316 aa16.23■□□□□ 0.19
CAPN13-203ENST00000458085 CLDN19Q8N6F1 224 aa16.23■□□□□ 0.19
CAPN13-203ENST00000458085 FRS2Q8WU20 508 aa16.23■□□□□ 0.19
CAPN13-203ENST00000458085 KCNJ9Q92806 393 aa16.23■□□□□ 0.19
CAPN13-203ENST00000458085 FUBP1Q96AE4 644 aaKnown RBP16.23■□□□□ 0.19
CAPN13-203ENST00000458085 ZFYVE19Q96K21 471 aa16.23■□□□□ 0.19
CAPN13-203ENST00000458085 MARK4Q96L34 752 aa16.23■□□□□ 0.19
CAPN13-203ENST00000458085 ERVK-6Q9BXR3 956 aa16.23■□□□□ 0.19
CAPN13-203ENST00000458085 VTI1BQ9UEU0 232 aa16.23■□□□□ 0.19
CAPN13-203ENST00000458085 TSR3Q9UJK0 312 aaKnown RBP16.23■□□□□ 0.19
CAPN13-203ENST00000458085 SZT2Q5T011 3432 aa16.23■□□□□ 0.19
CAPN13-203ENST00000458085 GLYATL1P3A0A0U1RQE8 302 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 BTN3A1O00481 513 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 PFDN6O15212 129 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 KERAO60938 352 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 ECI2O75521 394 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 ESR1P03372 595 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 ITGB6P18564 788 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 HK2P52789 917 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 TPRG1Q6ZUI0 275 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 CELF5Q8N6W0 485 aaKnown RBP16.22■□□□□ 0.19
CAPN13-203ENST00000458085 ZNF366Q8N895 744 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 OTUB2Q96DC9 234 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 LINGO1Q96FE5 620 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 KLHL32Q96NJ5 620 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 APOL5Q9BWW9 433 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.22■□□□□ 0.19
CAPN13-203ENST00000458085 DUS2Q9NX74 493 aaKnown RBP16.22■□□□□ 0.19
CAPN13-203ENST00000458085 RNF112Q9ULX5 631 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 PPIL1Q9Y3C6 166 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 NUP210Q8TEM1 1887 aaPredicted RBP16.22■□□□□ 0.19
CAPN13-203ENST00000458085 UNC80Q8N2C7 3258 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 TRBV5-4A0A0C4DH59 114 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 SUPT3HB4E1H0 165 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 E5RI56 91 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 SDHDO14521 159 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 SUPT3HO75486 399 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 CISD3P0C7P0 127 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 POLR2EP19388 210 aaKnown RBP16.22■□□□□ 0.19
CAPN13-203ENST00000458085 HK3P52790 923 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 BTKQ06187 659 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 CLEC6AQ6EIG7 209 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 PDE12Q6L8Q7 609 aaKnown RBP16.22■□□□□ 0.19
CAPN13-203ENST00000458085 AHI1Q8N157 1196 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 STAG3L4Q8TBR4 150 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 GDPD5Q8WTR4 605 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 MCCC1Q96RQ3 725 aaPredicted RBP16.22■□□□□ 0.19
CAPN13-203ENST00000458085 ABCG8Q9H221 673 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 DENND2DQ9H6A0 471 aaPredicted RBP16.22■□□□□ 0.19
CAPN13-203ENST00000458085 BRD9Q9H8M2 597 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 CDYLQ9Y232 598 aa16.22■□□□□ 0.19
CAPN13-203ENST00000458085 LOC100653049A0A140TA62 436 aa16.21■□□□□ 0.19
CAPN13-203ENST00000458085 EPOPA6NHQ4 379 aa16.21■□□□□ 0.19
CAPN13-203ENST00000458085 NCF1BA6NI72 391 aaPredicted RBP16.21■□□□□ 0.19
CAPN13-203ENST00000458085 NCF1CA8MVU1 366 aaPredicted RBP16.21■□□□□ 0.19
CAPN13-203ENST00000458085 SLCO1B7G3V0H7 640 aa16.21■□□□□ 0.19
CAPN13-203ENST00000458085 KRT34O76011 436 aa16.21■□□□□ 0.19
CAPN13-203ENST00000458085 POU2F2P09086 479 aa16.21■□□□□ 0.19
CAPN13-203ENST00000458085 GFAPP14136 432 aa16.21■□□□□ 0.19
CAPN13-203ENST00000458085 NCF1P14598 390 aaPredicted RBP16.21■□□□□ 0.19
CAPN13-203ENST00000458085 ITGALP20701 1170 aa16.21■□□□□ 0.19
CAPN13-203ENST00000458085 CD9P21926 228 aa16.21■□□□□ 0.19
CAPN13-203ENST00000458085 SPAM1P38567 509 aa16.21■□□□□ 0.19
CAPN13-203ENST00000458085 ATP6V0D1P61421 351 aa16.21■□□□□ 0.19
CAPN13-203ENST00000458085 KLF10Q13118 480 aa16.21■□□□□ 0.19
CAPN13-203ENST00000458085 DMC1Q14565 340 aa16.21■□□□□ 0.19
CAPN13-203ENST00000458085 FAM78AQ5JUQ0 283 aa16.21■□□□□ 0.19
CAPN13-203ENST00000458085 NXNQ6DKJ4 435 aa16.21■□□□□ 0.19
CAPN13-203ENST00000458085 CERS6Q6ZMG9 384 aa16.21■□□□□ 0.19
CAPN13-203ENST00000458085 STK40Q8N2I9 435 aa16.21■□□□□ 0.19
CAPN13-203ENST00000458085 NKAPQ8N5F7 415 aaKnown RBP16.21■□□□□ 0.19
CAPN13-203ENST00000458085 AGAP11Q8TF27 550 aa16.21■□□□□ 0.19
CAPN13-203ENST00000458085 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.21■□□□□ 0.19
CAPN13-203ENST00000458085 CIPCQ9C0C6 399 aa16.21■□□□□ 0.19
CAPN13-203ENST00000458085 CD248Q9HCU0 757 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms