RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 BRINP2Q9C0B6 783 aa17.59■□□□□ 0.41
PTPN6-204ENST00000456013 POLR1BQ9H9Y6 1135 aa17.59■□□□□ 0.41
PTPN6-204ENST00000456013 PKD2L2Q9NZM6 624 aa17.59■□□□□ 0.41
PTPN6-204ENST00000456013 RIMKLBQ9ULI2 386 aa17.59■□□□□ 0.41
PTPN6-204ENST00000456013 CLEC11AQ9Y240 323 aa17.59■□□□□ 0.41
PTPN6-204ENST00000456013 Q9Y3F1 56 aa17.59■□□□□ 0.41
PTPN6-204ENST00000456013 PAX3P23760 479 aa17.58■□□□□ 0.41
PTPN6-204ENST00000456013 HTR1EP28566 365 aa17.58■□□□□ 0.41
PTPN6-204ENST00000456013 NAA20P61599 178 aa17.58■□□□□ 0.41
PTPN6-204ENST00000456013 BTG3Q14201 252 aaPredicted RBP17.58■□□□□ 0.41
PTPN6-204ENST00000456013 KCTD8Q6ZWB6 473 aa17.58■□□□□ 0.41
PTPN6-204ENST00000456013 EFL1Q7Z2Z2 1120 aaKnown RBP17.58■□□□□ 0.41
PTPN6-204ENST00000456013 MON1AQ86VX9 555 aa17.58■□□□□ 0.41
PTPN6-204ENST00000456013 KIAA2013Q8IYS2 634 aa17.58■□□□□ 0.41
PTPN6-204ENST00000456013 TMEM199Q8N511 208 aa17.58■□□□□ 0.41
PTPN6-204ENST00000456013 OSCP1Q8WVF1 389 aa17.58■□□□□ 0.41
PTPN6-204ENST00000456013 CNDP2Q96KP4 475 aaKnown RBP17.58■□□□□ 0.41
PTPN6-204ENST00000456013 PARK7Q99497 189 aaKnown RBP17.58■□□□□ 0.41
PTPN6-204ENST00000456013 SLC30A3Q99726 388 aa17.58■□□□□ 0.41
PTPN6-204ENST00000456013 TIMM22Q9Y584 194 aa17.58■□□□□ 0.41
PTPN6-204ENST00000456013 CCDC154A6NI56 674 aa17.58■□□□□ 0.4
PTPN6-204ENST00000456013 BAIAP3O94812 1187 aa17.58■□□□□ 0.4
PTPN6-204ENST00000456013 SNAP29O95721 258 aa17.58■□□□□ 0.4
PTPN6-204ENST00000456013 IMPDH2P12268 514 aa17.58■□□□□ 0.4
PTPN6-204ENST00000456013 PBX3P40426 434 aa17.58■□□□□ 0.4
PTPN6-204ENST00000456013 MAP2K5Q13163 448 aa17.58■□□□□ 0.4
PTPN6-204ENST00000456013 FXNQ16595 210 aa17.58■□□□□ 0.4
PTPN6-204ENST00000456013 FUT11Q495W5 492 aa17.58■□□□□ 0.4
PTPN6-204ENST00000456013 XKR7Q5GH72 579 aa17.58■□□□□ 0.4
PTPN6-204ENST00000456013 MORN1Q5T089 497 aa17.58■□□□□ 0.4
PTPN6-204ENST00000456013 PROSER1Q86XN7 944 aa17.58■□□□□ 0.4
PTPN6-204ENST00000456013 SCN4BQ8IWT1 228 aa17.58■□□□□ 0.4
PTPN6-204ENST00000456013 RBM12BQ8IXT5 1001 aaKnown RBP17.58■□□□□ 0.4
PTPN6-204ENST00000456013 LEMD2Q8NC56 503 aa17.58■□□□□ 0.4
PTPN6-204ENST00000456013 PNPT1Q8TCS8 783 aaKnown RBP17.58■□□□□ 0.4
PTPN6-204ENST00000456013 RPL10LQ96L21 214 aaKnown RBP17.58■□□□□ 0.4
PTPN6-204ENST00000456013 TUBA1CQ9BQE3 449 aa17.58■□□□□ 0.4
PTPN6-204ENST00000456013 C1QTNF3Q9BXJ4 246 aa17.58■□□□□ 0.4
PTPN6-204ENST00000456013 SCML2Q9UQR0 700 aa17.58■□□□□ 0.4
PTPN6-204ENST00000456013 ZNF510Q9Y2H8 683 aa17.58■□□□□ 0.4
PTPN6-204ENST00000456013 LCHNA4D1U4 455 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 H0YAE9 185 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 TMX2-CTNND1H3BSU7 103 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 ZNF623O75123 536 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 SLC22A3O75751 556 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 RHOBTB1O94844 696 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 EPOP01588 193 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 CHRNA1P02708 482 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 CTSHP09668 335 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 HLCSP50747 726 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 UFM1P61960 85 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 PDCD4Q53EL6 469 aaKnown RBP17.57■□□□□ 0.4
PTPN6-204ENST00000456013 SETMARQ53H47 684 aaPredicted RBP17.57■□□□□ 0.4
PTPN6-204ENST00000456013 CCNYL2Q5T2Q4 361 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 PAQR3Q6TCH7 311 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 TMEM26Q6ZUK4 368 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 BIRC7Q96CA5 298 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 SUSD3Q96L08 255 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 POLR1EQ9GZS1 481 aaKnown RBP17.57■□□□□ 0.4
PTPN6-204ENST00000456013 TMEM9Q9P0T7 183 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 IKZF3Q9UKT9 509 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 STX16O14662 325 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 ECI2O75521 394 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 GJB3O75712 270 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 C1RP00736 705 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 NPPAP01160 153 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 HNRNPCP07910 306 aaKnown RBP eCLIP17.57■□□□□ 0.4
PTPN6-204ENST00000456013 UROSP10746 265 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 TYMPP19971 482 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 POLR2JP52435 117 aaKnown RBP17.57■□□□□ 0.4
PTPN6-204ENST00000456013 EMX2Q04743 252 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 GRSF1Q12849 480 aaKnown RBP eCLIP17.57■□□□□ 0.4
PTPN6-204ENST00000456013 TUSC3Q13454 348 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 AARS2Q5JTZ9 985 aaKnown RBP17.57■□□□□ 0.4
PTPN6-204ENST00000456013 NANOGP8Q6NSW7 305 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 ATP6V0D2Q8N8Y2 350 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 TBC1D15Q8TC07 691 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 BORCS5Q969J3 196 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 IGSF8Q969P0 613 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 TMEM74Q96NL1 305 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 BDH2Q9BUT1 245 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 NANOGQ9H9S0 305 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 TAS2R13Q9NYV9 303 aa17.57■□□□□ 0.4
PTPN6-204ENST00000456013 SYCE1LA8MT33 242 aa17.56■□□□□ 0.4
PTPN6-204ENST00000456013 GPR182O15218 404 aa17.56■□□□□ 0.4
PTPN6-204ENST00000456013 ESRRBO95718 433 aa17.56■□□□□ 0.4
PTPN6-204ENST00000456013 ITGB1P05556 798 aa17.56■□□□□ 0.4
PTPN6-204ENST00000456013 HRH2P25021 359 aa17.56■□□□□ 0.4
PTPN6-204ENST00000456013 RAD51Q06609 339 aa17.56■□□□□ 0.4
PTPN6-204ENST00000456013 SERINC3Q13530 473 aa17.56■□□□□ 0.4
PTPN6-204ENST00000456013 GALNT3Q14435 633 aa17.56■□□□□ 0.4
PTPN6-204ENST00000456013 POLD3Q15054 466 aaPredicted RBP17.56■□□□□ 0.4
PTPN6-204ENST00000456013 TSNQ15631 228 aaKnown RBP17.56■□□□□ 0.4
PTPN6-204ENST00000456013 ZNF829Q3KNS6 432 aaPredicted RBP17.56■□□□□ 0.4
PTPN6-204ENST00000456013 SYVN1Q86TM6 617 aa17.56■□□□□ 0.4
PTPN6-204ENST00000456013 BPIFB1Q8TDL5 484 aa17.56■□□□□ 0.4
PTPN6-204ENST00000456013 CDKN2AIPNLQ96HQ2 116 aa17.56■□□□□ 0.4
PTPN6-204ENST00000456013 VPS50Q96JG6 964 aa17.56■□□□□ 0.4
PTPN6-204ENST00000456013 ZIM2Q9NZV7 527 aa17.56■□□□□ 0.4
PTPN6-204ENST00000456013 SLAMF8Q9P0V8 285 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms