RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 PLEKHG4BQ96PX9 1271 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 ELAC1Q9H777 363 aaKnown RBP5.19□□□□□ -1.58
CSMD3-204ENST00000455883 GPRC5DQ9NZD1 345 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 CNTNAP2Q9UHC6 1331 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 C5P01031 1676 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 ATP6AP2A0A1C7CYW4 349 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 TSPAN4O14817 238 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 ATP6AP2O75787 350 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 IFNW1P05000 195 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 ACO1P21399 889 aaKnown RBP5.19□□□□□ -1.58
CSMD3-204ENST00000455883 SEC24CP53992 1094 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 CYP4F8P98187 520 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 PTPN20Q4JDL3 420 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 TTC7BQ86TV6 843 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 ARHGAP12Q8IWW6 846 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 ZNF567Q8N184 647 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 TTLL6Q8N841 843 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 ENDOVQ8N8Q3 282 aaKnown RBP5.19□□□□□ -1.58
CSMD3-204ENST00000455883 ZNF570Q96NI8 536 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 MXRA8Q9BRK3 442 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 IFT46Q9NQC8 304 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 ZIM2Q9NZV7 527 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 RICTORQ6R327 1708 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 RIC1Q4ADV7 1423 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 CICQ96RK0 1608 aaPredicted RBP5.19□□□□□ -1.58
CSMD3-204ENST00000455883 B8ZZF3 427 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 UBXN7O94888 489 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 ANXA1P04083 346 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 ADH6P28332 368 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 KIR3DL1P43629 444 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 PSPHP78330 225 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 TROAPQ12815 778 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 FASTKD3Q14CZ7 662 aaKnown RBP5.19□□□□□ -1.58
CSMD3-204ENST00000455883 HLA-DQA1Q5Y7H0 255 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 RTL6Q6ICC9 239 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 TRIM74Q86UV6 250 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 TRIM73Q86UV7 250 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 GPR180Q86V85 440 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 MCOLN2Q8IZK6 566 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 TBC1D16Q8TBP0 767 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 ALG2Q9H553 416 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 LOC100506127A0A0U1RQW1 187 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 ATP9BO43861 1147 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 PLIN3O60664 434 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 RSL1D1O76021 490 aaKnown RBP5.19□□□□□ -1.58
CSMD3-204ENST00000455883 PRAMEF1O95521 474 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 TFE3P19532 575 aaPredicted RBP5.19□□□□□ -1.58
CSMD3-204ENST00000455883 ANKRD22Q5VYY1 191 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 FRMD7Q6ZUT3 714 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 KLHDC8BQ8IXV7 354 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 GANCQ8TET4 914 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 TMEM176AQ96HP8 235 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 PNMA5Q96PV4 448 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 CHST12Q9NRB3 414 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 SNTG2Q9NY99 539 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 RPTORQ8N122 1335 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 ARHGEF15O94989 841 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 IL3P08700 152 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 GRIA3P42263 894 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 SLC9A3P48764 834 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 ELOAQ14241 798 aaKnown RBP5.19□□□□□ -1.58
CSMD3-204ENST00000455883 KANK2Q63ZY3 851 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 NEPROQ6NW34 567 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 KANSL1Q7Z3B3 1105 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 DEDD2Q8WXF8 326 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 AP2M1Q96CW1 435 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 CCDC106Q9BWC9 280 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 KCTD10Q9H3F6 313 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 ATP13A3Q9H7F0 1226 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 ITGB3P05106 788 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 CSN2P05814 226 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 GLDCP23378 1020 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 HNRNPFP52597 415 aaKnown RBP5.19□□□□□ -1.58
CSMD3-204ENST00000455883 PPP5CP53041 499 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 COL28A1Q2UY09 1125 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 FAM153CQ494X1 144 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 DCDC5Q6ZRR9 648 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 ATCAYQ86WG3 371 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 OXR1Q8N573 874 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 SMG7Q92540 1137 aaKnown RBP5.19□□□□□ -1.58
CSMD3-204ENST00000455883 NUDT4Q9NZJ9 180 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 KLQ9UEF7 1012 aa5.19□□□□□ -1.58
CSMD3-204ENST00000455883 A0A1B0GVM2 712 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 TCAF2A6NFQ2 919 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 DCXO43602 365 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 XYLBO75191 536 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 LYPLA2O95372 231 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 WDPCPO95876 746 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 PDYNP01213 254 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 EIF2AK2P19525 551 aaKnown RBP5.18□□□□□ -1.58
CSMD3-204ENST00000455883 CDK2P24941 298 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 MAPK12P53778 367 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 SPIN4Q56A73 249 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 PYDC2Q56P42 97 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 SPOCD1Q6ZMY3 1216 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 CPSF7Q8N684 471 aaKnown RBP5.18□□□□□ -1.58
CSMD3-204ENST00000455883 OR2T12Q8NG77 320 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 SPPL2AQ8TCT8 520 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 EPS8L1Q8TE68 723 aa5.18□□□□□ -1.58
CSMD3-204ENST00000455883 MRPS31Q92665 395 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms