RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 SPATA19Q7Z5L4 167 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 DEFB128Q7Z7B8 93 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 DDIASQ8IXT1 998 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 TCEAL8Q8IYN2 117 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 LILRA2Q8N149 483 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 SLC39A11Q8N1S5 342 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 ALG14Q96F25 216 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 PDLIM5Q96HC4 596 aaKnown RBP14.95□□□□□ -0.02
LDLR-202ENST00000455727 SLC30A3Q99726 388 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 GPATCH1Q9BRR8 931 aaKnown RBP14.95□□□□□ -0.02
LDLR-202ENST00000455727 FAM192AQ9GZU8 254 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 P2RY12Q9H244 342 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 COPS7BQ9H9Q2 264 aaPredicted RBP14.95□□□□□ -0.02
LDLR-202ENST00000455727 PFDN4Q9NQP4 134 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 PAK6Q9NQU5 681 aaPredicted RBP14.95□□□□□ -0.02
LDLR-202ENST00000455727 PCTPQ9UKL6 214 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 CNOT11Q9UKZ1 510 aaKnown RBP14.95□□□□□ -0.02
LDLR-202ENST00000455727 RAB26Q9ULW5 256 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 MAFFQ9ULX9 164 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 PKP3Q9Y446 797 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 KIAA1671Q9BY89 1806 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 NPEPPSL1A6NEC2 478 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 CAPN8A6NHC0 703 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 PRRG1O14668 218 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 OR1I1O60431 355 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 ESRRBO95718 433 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 OLFM2O95897 454 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 PRR35P0CG20 571 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 IDO1P14902 403 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 EPHB3P54753 998 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 RHOAP61586 193 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 CACNG1Q06432 222 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 TWF1Q12792 350 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 GRB7Q14451 532 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 IRAK1BP1Q5VVH5 260 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 PRMT9Q6P2P2 845 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 CERS6Q6ZMG9 384 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 Q6ZNB5 142 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 FAM217AQ8IXS0 508 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 TMEM102Q8N9M5 508 aaPredicted RBP14.95□□□□□ -0.02
LDLR-202ENST00000455727 DCAF4L2Q8NA75 395 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 SIDT2Q8NBJ9 832 aaKnown RBP14.95□□□□□ -0.02
LDLR-202ENST00000455727 FAM156AQ8NDB6 213 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 ADAMTS19Q8TE59 1207 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 TUBGCP3Q96CW5 907 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 TMEM169Q96HH4 297 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 TRAPPC9Q96Q05 1148 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 KCNA7Q96RP8 456 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 CCT7Q99832 543 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 Q9H521 79 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 BPIFA1Q9NP55 256 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 SEMA4BQ9NPR2 832 aaPredicted RBP14.95□□□□□ -0.02
LDLR-202ENST00000455727 SMPD4Q9NXE4 827 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 POLG2Q9UHN1 485 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 PCDHB9Q9Y5E1 797 aa14.95□□□□□ -0.02
LDLR-202ENST00000455727 AP1G1O43747 822 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 UROSP10746 265 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 EML3Q32P44 896 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 GPSM1Q86YR5 675 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 MARVELD2Q8N4S9 558 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 ZNF296Q8WUU4 475 aaPredicted RBP14.94□□□□□ -0.02
LDLR-202ENST00000455727 EEF1AKMT1Q8WVE0 214 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 LINGO1Q96FE5 620 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 ZNF558Q96NG5 402 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 PKP2Q99959 881 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 VPS51Q9UID3 782 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 OGDHLQ9ULD0 1010 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 ZNF711Q9Y462 761 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 PCDHB1Q9Y5F3 818 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 TCRBV3S1A0A5B6 114 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 GOLGA8CPA6NN73 597 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 ZCCHC18P0CG32 403 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 HGFP14210 728 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 CHRM3P20309 590 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 CLCN2P51788 898 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 PDK3Q15120 406 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 SPATS1Q496A3 300 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 FAM219BQ5XKK7 198 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 CNKSR3Q6P9H4 555 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 RETREG3Q86VR2 466 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 MINDY1Q8N5J2 469 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 GCNAQ96QF7 691 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 PCDHAC1Q9H158 963 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 MAP10Q9P2G4 905 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 ABCD2Q9UBJ2 740 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 DHRS7Q9Y394 339 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 AP4S1Q9Y587 144 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 PTGDR2Q9Y5Y4 395 aa14.94□□□□□ -0.02
LDLR-202ENST00000455727 A0A1B0GTL3 188 aa14.93□□□□□ -0.02
LDLR-202ENST00000455727 E5RI56 91 aa14.93□□□□□ -0.02
LDLR-202ENST00000455727 CRCPO75575 148 aa14.93□□□□□ -0.02
LDLR-202ENST00000455727 PGLSO95336 258 aa14.93□□□□□ -0.02
LDLR-202ENST00000455727 CHEK2O96017 543 aa14.93□□□□□ -0.02
LDLR-202ENST00000455727 LINC00032P0C843 101 aa14.93□□□□□ -0.02
LDLR-202ENST00000455727 HSPA8P11142 646 aaKnown RBP14.93□□□□□ -0.02
LDLR-202ENST00000455727 HSPA13P48723 471 aa14.93□□□□□ -0.02
LDLR-202ENST00000455727 CLCN7P51798 805 aa14.93□□□□□ -0.02
LDLR-202ENST00000455727 HK3P52790 923 aa14.93□□□□□ -0.02
LDLR-202ENST00000455727 XKR7Q5GH72 579 aa14.93□□□□□ -0.02
LDLR-202ENST00000455727 ARMC12Q5T9G4 340 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms