RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 PMS2P1A4D2B8 440 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 CDRT15L2A8MXV6 281 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 PLD2O14939 933 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 GRID2O43424 1007 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 B4GAT1O43505 415 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 NUAK1O60285 661 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 TJP3O95049 919 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 TNFSF15O95150 251 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 HLA-DPA1P20036 260 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 HMGCLP35914 325 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 GPR3P46089 330 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 OR1D5P58170 312 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 ZFP36L1Q07352 338 aaKnown RBP21.01■□□□□ 0.95
HMGB3-205ENST00000455596 SLC1A5Q15758 541 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 ITPRIPL1Q6GPH6 555 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 PEX26Q7Z412 305 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 PIM3Q86V86 326 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 CDKL3Q8IVW4 592 aaPredicted RBP21.01■□□□□ 0.95
HMGB3-205ENST00000455596 SPACA3Q8IXA5 215 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 SYCE1Q8N0S2 351 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 FBXO39Q8N4B4 442 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 SLC25A41Q8N5S1 370 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 ALG3Q92685 438 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 GLYATL1Q969I3 302 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 CRELD1Q96HD1 420 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 NAF1Q96HR8 494 aaKnown RBP21.01■□□□□ 0.95
HMGB3-205ENST00000455596 PLEKHG4BQ96PX9 1271 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 FSD1LQ9BXM9 530 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 C10orf88Q9H8K7 445 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 BPIFA1Q9NP55 256 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 ARFGAP3Q9NP61 516 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 HACD3Q9P035 362 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 FAM208BQ5VWN6 2430 aa21.01■□□□□ 0.95
HMGB3-205ENST00000455596 GOLGA6L6A8MZA4 724 aa21■□□□□ 0.95
HMGB3-205ENST00000455596 PPM1DO15297 605 aa21■□□□□ 0.95
HMGB3-205ENST00000455596 CPNE6O95741 557 aa21■□□□□ 0.95
HMGB3-205ENST00000455596 ITGA2BP08514 1039 aa21■□□□□ 0.95
HMGB3-205ENST00000455596 PYGMP11217 842 aa21■□□□□ 0.95
HMGB3-205ENST00000455596 ACP5P13686 325 aa21■□□□□ 0.95
HMGB3-205ENST00000455596 ZNF8P17098 575 aaPredicted RBP21■□□□□ 0.95
HMGB3-205ENST00000455596 CHRNA4P43681 627 aa21■□□□□ 0.95
HMGB3-205ENST00000455596 GEMP55040 296 aa21■□□□□ 0.95
HMGB3-205ENST00000455596 EIF3EP60228 445 aaKnown RBP21■□□□□ 0.95
HMGB3-205ENST00000455596 CLPPQ16740 277 aaPredicted RBP21■□□□□ 0.95
HMGB3-205ENST00000455596 AMZ1Q400G9 498 aa21■□□□□ 0.95
HMGB3-205ENST00000455596 AADACL2Q6P093 401 aa21■□□□□ 0.95
HMGB3-205ENST00000455596 PHYKPLQ8IUZ5 450 aa21■□□□□ 0.95
HMGB3-205ENST00000455596 KCNE4Q8WWG9 221 aa21■□□□□ 0.95
HMGB3-205ENST00000455596 DESI2Q9BSY9 194 aa21■□□□□ 0.95
HMGB3-205ENST00000455596 OR2AG1Q9H205 316 aa21■□□□□ 0.95
HMGB3-205ENST00000455596 GBA3Q9H227 469 aa21■□□□□ 0.95
HMGB3-205ENST00000455596 TRIM10Q9UDY6 481 aa21■□□□□ 0.95
HMGB3-205ENST00000455596 KCNK6Q9Y257 313 aa21■□□□□ 0.95
HMGB3-205ENST00000455596 GPR89AB7ZAQ6 455 aa20.99■□□□□ 0.95
HMGB3-205ENST00000455596 ANXA9O76027 345 aa20.99■□□□□ 0.95
HMGB3-205ENST00000455596 GPR89BP0CG08 455 aa20.99■□□□□ 0.95
HMGB3-205ENST00000455596 RBP3P10745 1247 aa20.99■□□□□ 0.95
HMGB3-205ENST00000455596 UGT1A5P35504 534 aa20.99■□□□□ 0.95
HMGB3-205ENST00000455596 FASLGP48023 281 aa20.99■□□□□ 0.95
HMGB3-205ENST00000455596 ZNF648Q5T619 568 aaPredicted RBP20.99■□□□□ 0.95
HMGB3-205ENST00000455596 ZDHHC20Q5W0Z9 365 aa20.99■□□□□ 0.95
HMGB3-205ENST00000455596 DARS2Q6PI48 645 aaKnown RBP20.99■□□□□ 0.95
HMGB3-205ENST00000455596 TMPRSS9Q7Z410 1059 aa20.99■□□□□ 0.95
HMGB3-205ENST00000455596 GLT6D1Q7Z4J2 308 aa20.99■□□□□ 0.95
HMGB3-205ENST00000455596 ADGRG6Q86SQ4 1221 aa20.99■□□□□ 0.95
HMGB3-205ENST00000455596 CLEC14AQ86T13 490 aa20.99■□□□□ 0.95
HMGB3-205ENST00000455596 SLITRK4Q8IW52 837 aa20.99■□□□□ 0.95
HMGB3-205ENST00000455596 SFRP1Q8N474 314 aa20.99■□□□□ 0.95
HMGB3-205ENST00000455596 UBL4BQ8N7F7 174 aa20.99■□□□□ 0.95
HMGB3-205ENST00000455596 SLC37A2Q8TED4 501 aa20.99■□□□□ 0.95
HMGB3-205ENST00000455596 TMEM159Q96B96 161 aa20.99■□□□□ 0.95
HMGB3-205ENST00000455596 CCDC97Q96F63 343 aaPredicted RBP20.99■□□□□ 0.95
HMGB3-205ENST00000455596 RDH14Q9HBH5 336 aa20.99■□□□□ 0.95
HMGB3-205ENST00000455596 ADGRG1Q9Y653 693 aa20.99■□□□□ 0.95
HMGB3-205ENST00000455596 ZFHX4Q86UP3 3567 aa20.98■□□□□ 0.95
HMGB3-205ENST00000455596 TRBV23OR9-2A0A075B6M9 112 aa20.98■□□□□ 0.95
HMGB3-205ENST00000455596 MIF4GDA9UHW6 222 aaKnown RBP20.98■□□□□ 0.95
HMGB3-205ENST00000455596 KCNN4O15554 427 aa20.98■□□□□ 0.95
HMGB3-205ENST00000455596 STK10O94804 968 aaKnown RBP20.98■□□□□ 0.95
HMGB3-205ENST00000455596 PTMAP06454 111 aaKnown RBP20.98■□□□□ 0.95
HMGB3-205ENST00000455596 JMJD7P0C870 316 aa20.98■□□□□ 0.95
HMGB3-205ENST00000455596 SLC2A4P14672 509 aa20.98■□□□□ 0.95
HMGB3-205ENST00000455596 TLE3Q04726 772 aa20.98■□□□□ 0.95
HMGB3-205ENST00000455596 ANKRD20A2Q5SQ80 823 aa20.98■□□□□ 0.95
HMGB3-205ENST00000455596 PHF19Q5T6S3 580 aa20.98■□□□□ 0.95
HMGB3-205ENST00000455596 ANKRD20A1Q5TYW2 823 aa20.98■□□□□ 0.95
HMGB3-205ENST00000455596 ANKRD20A3Q5VUR7 823 aa20.98■□□□□ 0.95
HMGB3-205ENST00000455596 BROXQ5VW32 411 aa20.98■□□□□ 0.95
HMGB3-205ENST00000455596 USP53Q70EK8 1073 aa20.98■□□□□ 0.95
HMGB3-205ENST00000455596 TTC30BQ8N4P2 665 aa20.98■□□□□ 0.95
HMGB3-205ENST00000455596 BLOC1S5Q8TDH9 187 aa20.98■□□□□ 0.95
HMGB3-205ENST00000455596 VPS35Q96QK1 796 aa20.98■□□□□ 0.95
HMGB3-205ENST00000455596 FAM118BQ9BPY3 351 aa20.98■□□□□ 0.95
HMGB3-205ENST00000455596 DPH1Q9BZG8 443 aa20.98■□□□□ 0.95
HMGB3-205ENST00000455596 SEMA6CQ9H3T2 930 aa20.98■□□□□ 0.95
HMGB3-205ENST00000455596 KCNK4Q9NYG8 393 aa20.98■□□□□ 0.95
HMGB3-205ENST00000455596 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.98■□□□□ 0.95
HMGB3-205ENST00000455596 TBC1D29Q9UFV1 150 aa20.98■□□□□ 0.95
HMGB3-205ENST00000455596 LOXL2Q9Y4K0 774 aa20.98■□□□□ 0.95
HMGB3-205ENST00000455596 CHD6Q8TD26 2715 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms