RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 PIH1D2Q8WWB5 315 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 KCNA7Q96RP8 456 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 ERVK-6Q9BXR3 956 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 LRRC3Q9BY71 257 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 GIMAP2Q9UG22 337 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 RIMKLBQ9ULI2 386 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 TIMM22Q9Y584 194 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 PTGDR2Q9Y5Y4 395 aa13.57□□□□□ -0.24
CLK3-203ENST00000454830 A0A0J9YYE9 177 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 GLYATL1P3A0A0U1RQE8 302 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 EIF4E1BA6NMX2 242 aaKnown RBP13.56□□□□□ -0.24
CLK3-203ENST00000454830 TRBC1P01850 177 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 PABPC1P11940 636 aaKnown RBP13.56□□□□□ -0.24
CLK3-203ENST00000454830 HMGCLP35914 325 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 AGTR2P50052 363 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 MUM1Q2TAK8 710 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 ANKS6Q68DC2 871 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 PSRC1Q6PGN9 363 aaPredicted RBP13.56□□□□□ -0.24
CLK3-203ENST00000454830 DPY19L3Q6ZPD9 716 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 GALNT7Q86SF2 657 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 SPPL3Q8TCT6 385 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 TUBGCP3Q96CW5 907 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 FAR2Q96K12 515 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 MAGEE1Q9HCI5 957 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 HCFC2Q9Y5Z7 792 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 ANKRD36A6QL64 1941 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 SYCE1LA8MT33 242 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 SDHDO14521 159 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 SORBS2O94875 1100 aaKnown RBP13.56□□□□□ -0.24
CLK3-203ENST00000454830 S100BP04271 92 aaPredicted RBP13.56□□□□□ -0.24
CLK3-203ENST00000454830 PTGER3P43115 390 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 MAPK8P45983 427 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 C1QTNF8P60827 252 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 HTRA4P83105 476 aaPredicted RBP13.56□□□□□ -0.24
CLK3-203ENST00000454830 NAA25Q14CX7 972 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 CHRNA6Q15825 494 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 HABP4Q5JVS0 413 aaKnown RBP13.56□□□□□ -0.24
CLK3-203ENST00000454830 C22orf39Q6P5X5 142 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 GK5Q6ZS86 529 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 CPXM2Q8N436 756 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 MTG2Q9H4K7 406 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 GSTO2Q9H4Y5 243 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 BPTFQ12830 3046 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 RGSL1A5PLK6 1076 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 LMNAP02545 664 aaKnown RBP13.56□□□□□ -0.24
CLK3-203ENST00000454830 SLC26A3P40879 764 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 PKNOX1P55347 436 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 TAF11Q15544 211 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 FUT11Q495W5 492 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 DET1Q7L5Y6 550 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 HPS6Q86YV9 775 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 STK40Q8N2I9 435 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 IRF7Q92985 503 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 EID2BQ96D98 161 aa13.56□□□□□ -0.24
CLK3-203ENST00000454830 CCDC97Q96F63 343 aaPredicted RBP13.56□□□□□ -0.24
CLK3-203ENST00000454830 MTIF3Q9H2K0 278 aaKnown RBP13.56□□□□□ -0.24
CLK3-203ENST00000454830 TFB2MQ9H5Q4 396 aaKnown RBP13.56□□□□□ -0.24
CLK3-203ENST00000454830 COPG1Q9Y678 874 aaKnown RBP13.56□□□□□ -0.24
CLK3-203ENST00000454830 PSMG1O95456 288 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 POLR2EP19388 210 aaKnown RBP13.55□□□□□ -0.24
CLK3-203ENST00000454830 AKT1P31749 480 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 ATP6V0D1P61421 351 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 ECT2LQ008S8 904 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 ARHGEF7Q14155 803 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 SLC14A2Q15849 920 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 MYLK3Q32MK0 819 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 UGT3A1Q6NUS8 523 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 CLP1Q92989 425 aaKnown RBP13.55□□□□□ -0.24
CLK3-203ENST00000454830 BIRC8Q96P09 236 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 NPAS2Q99743 824 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 FBRSL1Q9HCM7 1045 aaKnown RBP13.55□□□□□ -0.24
CLK3-203ENST00000454830 ADA2Q9NZK5 511 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 STOML1Q9UBI4 398 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 SLC25A14O95258 325 aaPredicted RBP13.55□□□□□ -0.24
CLK3-203ENST00000454830 LINC00032P0C843 101 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 CLCN4P51793 760 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 TIAL1Q01085 375 aaKnown RBP eCLIP13.55□□□□□ -0.242e-7■■■■■ 33.6
CLK3-203ENST00000454830 CTSL3PQ5NE16 218 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 USP45Q70EL2 814 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 CHST14Q8NCH0 376 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 KIAA1191Q96A73 305 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 KLHL32Q96NJ5 620 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 MMADHCQ9H3L0 296 aaPredicted RBP13.55□□□□□ -0.24
CLK3-203ENST00000454830 SUV39H2Q9H5I1 410 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 APPL1Q9UKG1 709 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 ANGPTL3Q9Y5C1 460 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 CCDC189A1A4V9 331 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 NPIPB15A6NHN6 443 aaPredicted RBP13.55□□□□□ -0.24
CLK3-203ENST00000454830 C9JVG2 144 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 MAGEC1O60732 1142 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 WFS1O76024 890 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 ESR1P03372 595 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 HSPA8P11142 646 aaKnown RBP13.55□□□□□ -0.24
CLK3-203ENST00000454830 ITGAXP20702 1163 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 HK2P52789 917 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 SLC20A2Q08357 652 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 LRRC66Q68CR7 880 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 KYQ8NBH2 561 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 GIMAP7Q8NHV1 300 aa13.55□□□□□ -0.24
CLK3-203ENST00000454830 RIN3Q8TB24 985 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms