RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 PTPRCAPQ14761 206 aa12.43□□□□□ -0.42
ECHDC1-209ENST00000454591 CYTH1Q15438 398 aa12.43□□□□□ -0.42
ECHDC1-209ENST00000454591 SLC5A9Q2M3M2 681 aa12.43□□□□□ -0.42
ECHDC1-209ENST00000454591 KIF19Q2TAC6 998 aa12.43□□□□□ -0.42
ECHDC1-209ENST00000454591 NADK2Q4G0N4 442 aa12.43□□□□□ -0.42
ECHDC1-209ENST00000454591 NHSL2Q5HYW2 709 aa12.43□□□□□ -0.42
ECHDC1-209ENST00000454591 SLC8B1Q6J4K2 584 aa12.43□□□□□ -0.42
ECHDC1-209ENST00000454591 RSPO2Q6UXX9 243 aaPredicted RBP12.43□□□□□ -0.42
ECHDC1-209ENST00000454591 GLT6D1Q7Z4J2 308 aa12.43□□□□□ -0.42
ECHDC1-209ENST00000454591 STK40Q8N2I9 435 aa12.43□□□□□ -0.42
ECHDC1-209ENST00000454591 METTL25Q8N6Q8 603 aa12.43□□□□□ -0.42
ECHDC1-209ENST00000454591 PNPLA1Q8N8W4 532 aa12.43□□□□□ -0.42
ECHDC1-209ENST00000454591 OR7D4Q8NG98 312 aa12.43□□□□□ -0.42
ECHDC1-209ENST00000454591 OR4K2Q8NGD2 314 aa12.43□□□□□ -0.42
ECHDC1-209ENST00000454591 OR56A4Q8NGH8 313 aa12.43□□□□□ -0.42
ECHDC1-209ENST00000454591 TMEM125Q96AQ2 219 aa12.43□□□□□ -0.42
ECHDC1-209ENST00000454591 LRRC58Q96CX6 371 aa12.43□□□□□ -0.42
ECHDC1-209ENST00000454591 HHIPL1Q96JK4 782 aa12.43□□□□□ -0.42
ECHDC1-209ENST00000454591 MYRFLQ96LU7 910 aa12.43□□□□□ -0.42
ECHDC1-209ENST00000454591 CNBD2Q96M20 576 aa12.43□□□□□ -0.42
ECHDC1-209ENST00000454591 GLT1D1Q96MS3 346 aa12.43□□□□□ -0.42
ECHDC1-209ENST00000454591 NSUN5Q96P11 429 aaKnown RBP12.43□□□□□ -0.42
ECHDC1-209ENST00000454591 AGPAT4Q9NRZ5 378 aa12.43□□□□□ -0.42
ECHDC1-209ENST00000454591 PNPLA3Q9NST1 481 aa12.43□□□□□ -0.42
ECHDC1-209ENST00000454591 DUS2Q9NX74 493 aaKnown RBP12.43□□□□□ -0.42
ECHDC1-209ENST00000454591 CMTM6Q9NX76 183 aa12.43□□□□□ -0.42
ECHDC1-209ENST00000454591 TUBA8Q9NY65 449 aaPredicted RBP12.43□□□□□ -0.42
ECHDC1-209ENST00000454591 STOML2Q9UJZ1 356 aa12.43□□□□□ -0.42
ECHDC1-209ENST00000454591 ATP6AP2A0A1C7CYW4 349 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 ARHGAP10A1A4S6 786 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 LRRC14BA6NHZ5 514 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 H3BNH8 94 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 IFRD1O00458 451 aaPredicted RBP12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 NR5A2O00482 541 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 PPP6CO00743 305 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 ENPP3O14638 875 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 HTRA2O43464 458 aaPredicted RBP12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 ATP6AP2O75787 350 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 CHEK2O96017 543 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 ESR1P03372 595 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 CYBBP04839 570 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 HGFP14210 728 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 ATF6P18850 670 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 TSPAN8P19075 237 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 PTGER3P43115 390 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 ERVK-8P63133 956 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 PRKCQQ04759 706 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 MAP7Q14244 749 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 TSNQ15631 228 aaKnown RBP12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 SMU1Q2TAY7 513 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 KCTD21Q4G0X4 260 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 MTX3Q5HYI7 312 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 B3GNT6Q6ZMB0 384 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 SPRED1Q7Z699 444 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 SPNS2Q8IVW8 549 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 GALNT4Q8N4A0 578 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 DPP10Q8N608 796 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 CD200R1Q8TD46 325 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 ADAMTS16Q8TE57 1224 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 CANT1Q8WVQ1 401 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 TUBGCP3Q96CW5 907 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 GPR21Q99679 349 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 SEPT5Q99719 369 aaPredicted RBP12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 ADGRE3Q9BY15 652 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 MRPL9Q9BYD2 267 aaKnown RBP12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 P2RY12Q9H244 342 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 SCUBE2Q9NQ36 999 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 HEBP1Q9NRV9 189 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 RIC8BQ9NVN3 520 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 NUDT4Q9NZJ9 180 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 IKZF3Q9UKT9 509 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 AGO1Q9UL18 857 aaKnown RBP12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 SLC27A5Q9Y2P5 690 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 SNX13Q9Y5W8 968 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 BACE2Q9Y5Z0 518 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 ZFP37Q9Y6Q3 630 aaPredicted RBP12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 COL4A6Q14031 1691 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 TCRBV5S2A0A599 114 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 DHRS12A0PJE2 317 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 ANKRD33BA6NCL7 494 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 ARNTLO00327 626 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 FZD6O60353 706 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 BMP10O95393 424 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 PGM3O95394 542 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 H6PDO95479 791 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 SELPP16109 830 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 IL10P22301 178 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 HTR1EP28566 365 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 FMO4P31512 558 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 TUFMP49411 452 aaKnown RBP12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 PCBP2Q15366 365 aaKnown RBP eCLIP12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 PTPRNQ16849 979 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 TMEM259Q4ZIN3 620 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 INO80DQ53TQ3 878 aaPredicted RBP12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 CTSL3PQ5NE16 218 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 RTP2Q5QGT7 225 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 UGT3A1Q6NUS8 523 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 METTL2BQ6P1Q9 378 aaKnown RBP12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 ZBTB49Q6ZSB9 765 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 SYVN1Q86TM6 617 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms