RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 TAS2R42Q7RTR8 314 aa10.9□□□□□ -0.66
SCN9A-205ENST00000454569 TRIM74Q86UV6 250 aa10.9□□□□□ -0.66
SCN9A-205ENST00000454569 SLC26A11Q86WA9 606 aa10.9□□□□□ -0.66
SCN9A-205ENST00000454569 ZC3HC1Q86WB0 502 aaKnown RBP10.9□□□□□ -0.66
SCN9A-205ENST00000454569 SERPINA9Q86WD7 417 aa10.9□□□□□ -0.66
SCN9A-205ENST00000454569 TDRPQ86YL5 185 aa10.9□□□□□ -0.66
SCN9A-205ENST00000454569 MAML2Q8IZL2 1156 aaPredicted RBP10.9□□□□□ -0.66
SCN9A-205ENST00000454569 OTUD6BQ8N6M0 293 aa10.9□□□□□ -0.66
SCN9A-205ENST00000454569 AP2M1Q96CW1 435 aa10.9□□□□□ -0.66
SCN9A-205ENST00000454569 TOE1Q96GM8 510 aaKnown RBP10.9□□□□□ -0.66
SCN9A-205ENST00000454569 SGSM3Q96HU1 749 aa10.9□□□□□ -0.66
SCN9A-205ENST00000454569 PLEKHG4BQ96PX9 1271 aa10.9□□□□□ -0.66
SCN9A-205ENST00000454569 KLF6Q99612 283 aaPredicted RBP10.9□□□□□ -0.66
SCN9A-205ENST00000454569 MYOCQ99972 504 aa10.9□□□□□ -0.66
SCN9A-205ENST00000454569 SPATA16Q9BXB7 569 aa10.9□□□□□ -0.66
SCN9A-205ENST00000454569 C1QTNF2Q9BXJ5 285 aa10.9□□□□□ -0.66
SCN9A-205ENST00000454569 ROPN1BQ9BZX4 212 aaPredicted RBP10.9□□□□□ -0.66
SCN9A-205ENST00000454569 C6orf106Q9H6K1 298 aaPredicted RBP10.9□□□□□ -0.66
SCN9A-205ENST00000454569 CAAP1Q9H8G2 361 aa10.9□□□□□ -0.66
SCN9A-205ENST00000454569 CAB39LQ9H9S4 337 aa10.9□□□□□ -0.66
SCN9A-205ENST00000454569 ROPN1Q9HAT0 212 aaPredicted RBP10.9□□□□□ -0.66
SCN9A-205ENST00000454569 FZD3Q9NPG1 666 aa10.9□□□□□ -0.66
SCN9A-205ENST00000454569 GALPQ9UBC7 116 aa10.9□□□□□ -0.66
SCN9A-205ENST00000454569 SCML1Q9UN30 329 aa10.9□□□□□ -0.66
SCN9A-205ENST00000454569 CA5BQ9Y2D0 317 aa10.9□□□□□ -0.66
SCN9A-205ENST00000454569 SLCO1B1Q9Y6L6 691 aa10.9□□□□□ -0.66
SCN9A-205ENST00000454569 TNRC6BQ9UPQ9 1833 aaKnown RBP10.9□□□□□ -0.66
SCN9A-205ENST00000454569 IGHV1OR15-9A0A0B4J2B8 117 aa10.9□□□□□ -0.67
SCN9A-205ENST00000454569 INPP4BO15327 924 aa10.9□□□□□ -0.67
SCN9A-205ENST00000454569 TM7SF2O76062 418 aa10.9□□□□□ -0.67
SCN9A-205ENST00000454569 IGLV3-19P01714 112 aa10.9□□□□□ -0.67
SCN9A-205ENST00000454569 OAS2P29728 719 aaKnown RBP10.9□□□□□ -0.67
SCN9A-205ENST00000454569 EIF3BP55884 814 aaKnown RBP10.9□□□□□ -0.67
SCN9A-205ENST00000454569 TYSND1Q2T9J0 566 aa10.9□□□□□ -0.67
SCN9A-205ENST00000454569 MAP7D1Q3KQU3 841 aa10.9□□□□□ -0.67
SCN9A-205ENST00000454569 FASTKD1Q53R41 847 aaKnown RBP10.9□□□□□ -0.67
SCN9A-205ENST00000454569 KCTD16Q68DU8 428 aa10.9□□□□□ -0.67
SCN9A-205ENST00000454569 ZNF449Q6P9G9 518 aa10.9□□□□□ -0.67
SCN9A-205ENST00000454569 SNX20Q7Z614 316 aa10.9□□□□□ -0.67
SCN9A-205ENST00000454569 KBTBD6Q86V97 674 aa10.9□□□□□ -0.67
SCN9A-205ENST00000454569 DEFB119Q8N690 84 aa10.9□□□□□ -0.67
SCN9A-205ENST00000454569 TP53I13Q8NBR0 393 aaPredicted RBP10.9□□□□□ -0.67
SCN9A-205ENST00000454569 PRR7Q8TB68 274 aa10.9□□□□□ -0.67
SCN9A-205ENST00000454569 NUS1Q96E22 293 aa10.9□□□□□ -0.67
SCN9A-205ENST00000454569 SERAC1Q96JX3 654 aa10.9□□□□□ -0.67
SCN9A-205ENST00000454569 NDNQ99608 321 aa10.9□□□□□ -0.67
SCN9A-205ENST00000454569 RBBP8Q99708 897 aa10.9□□□□□ -0.67
SCN9A-205ENST00000454569 CCDC77Q9BR77 488 aa10.9□□□□□ -0.67
SCN9A-205ENST00000454569 FAM167BQ9BTA0 163 aa10.9□□□□□ -0.67
SCN9A-205ENST00000454569 CENPHQ9H3R5 247 aa10.9□□□□□ -0.67
SCN9A-205ENST00000454569 EPHX3Q9H6B9 360 aa10.9□□□□□ -0.67
SCN9A-205ENST00000454569 WSB2Q9NYS7 404 aaPredicted RBP10.9□□□□□ -0.67
SCN9A-205ENST00000454569 FETUBQ9UGM5 382 aa10.9□□□□□ -0.67
SCN9A-205ENST00000454569 LGALS13Q9UHV8 139 aa10.9□□□□□ -0.67
SCN9A-205ENST00000454569 SLC24A2Q9UI40 661 aa10.9□□□□□ -0.67
SCN9A-205ENST00000454569 NCKAP1Q9Y2A7 1128 aa10.9□□□□□ -0.67
SCN9A-205ENST00000454569 SLC30A1Q9Y6M5 507 aa10.9□□□□□ -0.67
SCN9A-205ENST00000454569 LRP4O75096 1905 aa10.9□□□□□ -0.67
SCN9A-205ENST00000454569 PI4KAP42356 2102 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 DMDP11532 3685 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 GOLGA6L10A6NI86 522 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 IQCF5A8MTL0 148 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 TRIM49D1C9J1S8 452 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 SLC31A1O15431 190 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 APBB3O95704 486 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 TOP3BO95985 862 aaKnown RBP10.89□□□□□ -0.67
SCN9A-205ENST00000454569 IGHV4-34P06331 123 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 INHBAP08476 426 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 ITGA2BP08514 1039 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 TDGF1P13385 188 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 FMO4P31512 558 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 GP5P40197 560 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 DCDC1P59894 354 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 IRF4Q15306 451 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 SETMARQ53H47 684 aaPredicted RBP10.89□□□□□ -0.67
SCN9A-205ENST00000454569 CTSL3PQ5NE16 218 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 SH2D5Q6ZV89 423 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 CYP2U1Q7Z449 544 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 CMC1Q7Z7K0 106 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 EXOC3L1Q86VI1 746 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 HORMAD1Q86X24 394 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 NXPE1Q8N323 547 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 DCLK2Q8N568 766 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 TRAM1L1Q8N609 369 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 CLDN19Q8N6F1 224 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 LKAAEAR1Q8TD35 194 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 LPGAT1Q92604 370 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 CDKL2Q92772 493 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 CENPTQ96BT3 561 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 FAM136AQ96C01 138 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 VPS39Q96JC1 886 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 BIRC8Q96P09 236 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 LENG8Q96PV6 779 aaPredicted RBP10.89□□□□□ -0.67
SCN9A-205ENST00000454569 CPNE1Q99829 537 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 C19orf43Q9BQ61 176 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 LGR4Q9BXB1 951 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 GPR174Q9BXC1 333 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 SLC17A9Q9BYT1 436 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 BTBD1Q9H0C5 482 aa10.89□□□□□ -0.67
SCN9A-205ENST00000454569 SPATA6Q9NWH7 488 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms