RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 TBC1D7Q9P0N9 293 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 HESX1Q9UBX0 185 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 KCNN3Q9UGI6 736 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 RAPGEFL1Q9UHV5 662 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 FBXW11Q9UKB1 542 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 CNOT11Q9UKZ1 510 aaKnown RBP4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 KIAA1257Q9ULG3 409 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 SHOC2Q9UQ13 582 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 GAKO14976 1311 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 C13orf42A0A1B0GVH6 325 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 OR6C74A6NCV1 312 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 FAM90A8PA6NJQ4 464 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 NPIPB13A6NJU9 1138 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 ZNF716A6NP11 495 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 HSBP1L1C9JCN9 74 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 NPIPB4C9JG80 1138 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 WRBO00258 174 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 POLRMTO00411 1230 aaKnown RBP4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 DNALI1O14645 258 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 VPS4BO75351 444 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 SLC25A12O75746 678 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 MOCS3O95396 460 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 OTCP00480 354 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 OR52Z1P0C646 297 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 FAM90A13PP0C7W8 464 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 FAM90A24PP0C7X0 464 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 ZNF735P0CB33 412 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 LYL1P12980 280 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 DRD1P21728 446 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 ACP1P24666 158 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 POU1F1P28069 291 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 RBL1P28749 1068 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 PTPN6P29350 595 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 PCGF2P35227 344 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 CAPGP40121 348 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 GNAQP50148 359 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 SCNN1GP51170 649 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 PGDP52209 483 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 ARSFP54793 590 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 HUNKP57058 714 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 RBPJQ06330 500 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 ACSM2AQ08AH3 577 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 LAMB3Q13751 1172 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 SLC39A14Q15043 492 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 SKIDA1Q1XH10 827 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 PCGF3Q3KNV8 242 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 RARS2Q5T160 578 aaKnown RBP4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 SPOUT1Q5T280 376 aaKnown RBP4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 PRAMEF8Q5VWM4 474 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 AFMIDQ63HM1 303 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 ATG9BQ674R7 924 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 ACSM2BQ68CK6 577 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 KIAA1324Q6UXG2 1013 aaKnown RBP4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 CLEC9AQ6UXN8 241 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 ZNF813Q6ZN06 617 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 TAOK1Q7L7X3 1001 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 ZC3H18Q86VM9 953 aaKnown RBP4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 REXO1L1PQ8IX06 675 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 FAM126BQ8IXS8 530 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 SLC43A2Q8N370 569 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 TCAIMQ8N3R3 496 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 C11orf65Q8NCR3 313 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 NLGN4YQ8NFZ3 816 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 SLC22A8Q8TCC7 542 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 RNASE8Q8TDE3 154 aaKnown RBP4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 DNAJA4Q8WW22 397 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 LRRC45Q96CN5 670 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 RRNAD1Q96FB5 475 aaKnown RBP4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 DTD2Q96FN9 168 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 FAR2Q96K12 515 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 ART5Q96L15 291 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 WDR92Q96MX6 357 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 SLC46A1Q96NT5 459 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 QRFPRQ96P65 431 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 PSKH2Q96QS6 385 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 PCYT2Q99447 389 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 MYOCQ99972 504 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 PAAF1Q9BRP4 392 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 UQCC2Q9BRT2 126 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 KATNB1Q9BVA0 655 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 C1QTNF1Q9BXJ1 281 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 CRNKL1Q9BZJ0 848 aaKnown RBP4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 EXO5Q9H790 373 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 PRMT7Q9NVM4 692 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 SAE1Q9UBE0 346 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 TRIM10Q9UDY6 481 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 ANGPTL2Q9UKU9 493 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 CDC14AQ9UNH5 594 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 SNX7Q9UNH6 387 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 SLC12A4Q9UP95 1085 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 CMAHPQ9Y471 501 aa4.42□□□□□ -1.7
HMGB3P21-201ENST00000452483 A0A1B0GVM2 712 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 SDR42E2A6NKP2 422 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 MEIS2O14770 477 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 HS3ST1O14792 307 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 SLC16A3O15427 465 aaKnown RBP4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 YKT6O15498 198 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 CTIFO43310 598 aaKnown RBP4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 PLRG1O43660 514 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms