RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 SERPIND1P05546 499 aa11.11□□□□□ -0.63
DDR1-239ENST00000452441 ALOX15P16050 662 aaPredicted RBP11.11□□□□□ -0.63
DDR1-239ENST00000452441 SYN1P17600 705 aa11.11□□□□□ -0.63
DDR1-239ENST00000452441 CTGFP29279 349 aa11.11□□□□□ -0.63
DDR1-239ENST00000452441 AQP1P29972 269 aa11.11□□□□□ -0.63
DDR1-239ENST00000452441 HSPA7P48741 367 aa11.11□□□□□ -0.63
DDR1-239ENST00000452441 APLP1P51693 650 aa11.11□□□□□ -0.63
DDR1-239ENST00000452441 ADGRE1Q14246 886 aa11.11□□□□□ -0.63
DDR1-239ENST00000452441 KLHL32Q96NJ5 620 aa11.11□□□□□ -0.63
DDR1-239ENST00000452441 HAPLN3Q96S86 360 aa11.11□□□□□ -0.63
DDR1-239ENST00000452441 ZBTB18Q99592 522 aa11.11□□□□□ -0.63
DDR1-239ENST00000452441 PRKD2Q9BZL6 878 aa11.11□□□□□ -0.63
DDR1-239ENST00000452441 TNFRSF12AQ9NP84 129 aa11.11□□□□□ -0.63
DDR1-239ENST00000452441 USP22Q9UPT9 525 aa11.11□□□□□ -0.63
DDR1-239ENST00000452441 TMEM114B3SHH9 223 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 SLCO1B7G3V0H7 640 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 HAS3O00219 553 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 TFAP2AP05549 437 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 FASP25445 335 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 SULT2A1Q06520 285 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 IKBKEQ14164 716 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 MS4A13Q5J8X5 152 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 RTP2Q5QGT7 225 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 PIK3R6Q5UE93 754 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 OTUD1Q5VV17 481 aaPredicted RBP11.1□□□□□ -0.63
DDR1-239ENST00000452441 KLHDC10Q6PID8 442 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 SCD5Q86SK9 330 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 KLHDC9Q8NEP7 349 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 FAM81AQ8TBF8 368 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 C3orf30Q96M34 536 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 TMEM106CQ9BVX2 250 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 RUBCNLQ9H714 662 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 EIF2B3Q9NR50 452 aaKnown RBP11.1□□□□□ -0.63
DDR1-239ENST00000452441 AGO1Q9UL18 857 aaKnown RBP11.1□□□□□ -0.63
DDR1-239ENST00000452441 PRPF19Q9UMS4 504 aaKnown RBP11.1□□□□□ -0.63
DDR1-239ENST00000452441 A0A1W2PQ45 241 aaPredicted RBP11.1□□□□□ -0.63
DDR1-239ENST00000452441 A0A1W2PQY0 241 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 PRORSD1PA6NEY8 169 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 TNFAIP8O95379 198 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 ALBP02768 609 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 CYBBP04839 570 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 SLC10A3P09131 477 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 TUFMP49411 452 aaKnown RBP11.1□□□□□ -0.63
DDR1-239ENST00000452441 ELAVL2Q12926 359 aaKnown RBP11.1□□□□□ -0.63
DDR1-239ENST00000452441 CLLU1OSQ5K130 101 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 METTL21CQ5VZV1 264 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 ANKS3Q6ZW76 656 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 PGAM4Q8N0Y7 254 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 LILRA2Q8N149 483 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 C2orf73Q8N5S3 287 aaPredicted RBP11.1□□□□□ -0.63
DDR1-239ENST00000452441 DTNBP1Q96EV8 351 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 ASB8Q9H765 288 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 GID8Q9NWU2 228 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 OSER1Q9NX31 292 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 ANKRD6Q9Y2G4 727 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 USP3Q9Y6I4 520 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 LINC00854A0A1B0GVQ3 168 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 DHRS12A0PJE2 317 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 SDHDO14521 159 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 SMIM18P0DKX4 95 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 LBPP18428 481 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 EPHB3P54753 998 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 GRM2Q14416 872 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 USP41Q3LFD5 358 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 PLPP4Q5VZY2 271 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 TSSK3Q96PN8 268 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 MYOCQ99972 504 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 CLPBQ9H078 707 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 ACTR8Q9H981 624 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 NDUFA13Q9P0J0 144 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 ZNF638Q14966 1978 aaKnown RBP11.1□□□□□ -0.63
DDR1-239ENST00000452441 KRT87PA6NCN2 255 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 NOBOXO60393 691 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 RHOQP17081 205 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 MAGP20916 626 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 PRDX6P30041 224 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 SH3BGRP55822 239 aaPredicted RBP11.1□□□□□ -0.63
DDR1-239ENST00000452441 CDKL1Q00532 357 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 LRRC74AQ0VAA2 488 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 MADCAM1Q13477 382 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 TRIM25Q14258 630 aaKnown RBP11.1□□□□□ -0.63
DDR1-239ENST00000452441 SAMD4BQ5PRF9 694 aaKnown RBP11.1□□□□□ -0.63
DDR1-239ENST00000452441 B3GNT6Q6ZMB0 384 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 BNIPLQ7Z465 357 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 GALNT5Q7Z7M9 940 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 CAMK1DQ8IU85 385 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 MFSD6LQ8IWD5 586 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 CLYBLQ8N0X4 340 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 METTL25Q8N6Q8 603 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 IRGQQ8WZA9 623 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 SLC29A1Q99808 456 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 ROGDIQ9GZN7 287 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 SLC25A51Q9H1U9 297 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 ZDHHC6Q9H6R6 413 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 POLR1BQ9H9Y6 1135 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 ZBTB26Q9HCK0 441 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 PREBQ9HCU5 417 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 TLR9Q9NR96 1032 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 ATXN10Q9UBB4 475 aa11.1□□□□□ -0.63
DDR1-239ENST00000452441 POLR3HQ9Y535 204 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms