RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 PCDHGA1Q9Y5H4 931 aa19.78■□□□□ 0.76
COL9A3-202ENST00000452372 SAR1BQ9Y6B6 198 aa19.78■□□□□ 0.76
COL9A3-202ENST00000452372 FASNP49327 2511 aaKnown RBP19.77■□□□□ 0.76
COL9A3-202ENST00000452372 ASMTLO95671 621 aa19.77■□□□□ 0.76
COL9A3-202ENST00000452372 ANXA6P08133 673 aa19.77■□□□□ 0.76
COL9A3-202ENST00000452372 CELA2BP08218 269 aaPredicted RBP19.77■□□□□ 0.76
COL9A3-202ENST00000452372 TPH1P17752 444 aa19.77■□□□□ 0.76
COL9A3-202ENST00000452372 SPAM1P38567 509 aa19.77■□□□□ 0.76
COL9A3-202ENST00000452372 CYP4F3Q08477 520 aa19.77■□□□□ 0.76
COL9A3-202ENST00000452372 PTPRCAPQ14761 206 aa19.77■□□□□ 0.76
COL9A3-202ENST00000452372 DEFB133Q30KQ1 61 aa19.77■□□□□ 0.76
COL9A3-202ENST00000452372 CCDC137Q6PK04 289 aaKnown RBP19.77■□□□□ 0.76
COL9A3-202ENST00000452372 C17orf53Q8N3J3 647 aaPredicted RBP19.77■□□□□ 0.76
COL9A3-202ENST00000452372 OR4K2Q8NGD2 314 aa19.77■□□□□ 0.76
COL9A3-202ENST00000452372 PTCD2Q8WV60 388 aaKnown RBP19.77■□□□□ 0.76
COL9A3-202ENST00000452372 GLYATL1Q969I3 302 aa19.77■□□□□ 0.76
COL9A3-202ENST00000452372 TMEM168Q9H0V1 697 aa19.77■□□□□ 0.76
COL9A3-202ENST00000452372 TRNAU1APQ9NX07 287 aaKnown RBP19.77■□□□□ 0.76
COL9A3-202ENST00000452372 SUFUQ9UMX1 484 aa19.77■□□□□ 0.76
COL9A3-202ENST00000452372 RAXQ9Y2V3 346 aa19.77■□□□□ 0.76
COL9A3-202ENST00000452372 KCTD3Q9Y597 815 aa19.77■□□□□ 0.76
COL9A3-202ENST00000452372 OAS3Q9Y6K5 1087 aaKnown RBP19.77■□□□□ 0.76
COL9A3-202ENST00000452372 GOLGA6L10A0A0M3HER8 536 aa19.76■□□□□ 0.75
COL9A3-202ENST00000452372 LDB2O43679 373 aa19.76■□□□□ 0.75
COL9A3-202ENST00000452372 PHF2O75151 1096 aa19.76■□□□□ 0.75
COL9A3-202ENST00000452372 SLC25A14O95258 325 aaPredicted RBP19.76■□□□□ 0.75
COL9A3-202ENST00000452372 APRTP07741 180 aa19.76■□□□□ 0.75
COL9A3-202ENST00000452372 CKMT2P17540 419 aa19.76■□□□□ 0.75
COL9A3-202ENST00000452372 GNPDA1P46926 289 aa19.76■□□□□ 0.75
COL9A3-202ENST00000452372 ACADVLP49748 655 aa19.76■□□□□ 0.75
COL9A3-202ENST00000452372 CDH17Q12864 832 aa19.76■□□□□ 0.75
COL9A3-202ENST00000452372 ATP13A5Q4VNC0 1218 aa19.76■□□□□ 0.75
COL9A3-202ENST00000452372 ZCCHC8Q6NZY4 707 aaKnown RBP19.76■□□□□ 0.75
COL9A3-202ENST00000452372 C19orf48Q6RUI8 117 aa19.76■□□□□ 0.75
COL9A3-202ENST00000452372 TMPRSS12Q86WS5 348 aa19.76■□□□□ 0.75
COL9A3-202ENST00000452372 GKN2Q86XP6 184 aa19.76■□□□□ 0.75
COL9A3-202ENST00000452372 CREG2Q8IUH2 290 aa19.76■□□□□ 0.75
COL9A3-202ENST00000452372 OR52K1Q8NGK4 314 aa19.76■□□□□ 0.75
COL9A3-202ENST00000452372 SCG3Q8WXD2 468 aaKnown RBP19.76■□□□□ 0.75
COL9A3-202ENST00000452372 APOLD1Q96LR9 279 aa19.76■□□□□ 0.75
COL9A3-202ENST00000452372 VPS35Q96QK1 796 aa19.76■□□□□ 0.75
COL9A3-202ENST00000452372 TRIM39Q9HCM9 518 aa19.76■□□□□ 0.75
COL9A3-202ENST00000452372 DOLKQ9UPQ8 538 aa19.76■□□□□ 0.75
COL9A3-202ENST00000452372 LOC400499M0QZD8 3231 aa19.75■□□□□ 0.75
COL9A3-202ENST00000452372 GLYATL1P3A0A0U1RQE8 302 aa19.75■□□□□ 0.75
COL9A3-202ENST00000452372 GAPDHSO14556 408 aaPredicted RBP19.75■□□□□ 0.75
COL9A3-202ENST00000452372 FANCGO15287 622 aa19.75■□□□□ 0.75
COL9A3-202ENST00000452372 KRT14P02533 472 aa19.75■□□□□ 0.75
COL9A3-202ENST00000452372 CHRNA6Q15825 494 aa19.75■□□□□ 0.75
COL9A3-202ENST00000452372 PYCR3Q53H96 274 aa19.75■□□□□ 0.75
COL9A3-202ENST00000452372 FAM151BQ6UXP7 276 aa19.75■□□□□ 0.75
COL9A3-202ENST00000452372 DNAAF3Q8N9W5 541 aa19.75■□□□□ 0.75
COL9A3-202ENST00000452372 GPBAR1Q8TDU6 330 aa19.75■□□□□ 0.75
COL9A3-202ENST00000452372 BOCQ9BWV1 1114 aa19.75■□□□□ 0.75
COL9A3-202ENST00000452372 RMI1Q9H9A7 625 aa19.75■□□□□ 0.75
COL9A3-202ENST00000452372 CASS4Q9NQ75 786 aa19.75■□□□□ 0.75
COL9A3-202ENST00000452372 EIF2B3Q9NR50 452 aaKnown RBP19.75■□□□□ 0.75
COL9A3-202ENST00000452372 PIH1D1Q9NWS0 290 aaKnown RBP19.75■□□□□ 0.75
COL9A3-202ENST00000452372 TMPRSS11EQ9UL52 423 aa19.75■□□□□ 0.75
COL9A3-202ENST00000452372 ARHGEF17Q96PE2 2063 aaPredicted RBP19.75■□□□□ 0.75
COL9A3-202ENST00000452372 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.74■□□□□ 0.75
COL9A3-202ENST00000452372 DNAJC6O75061 913 aa19.74■□□□□ 0.75
COL9A3-202ENST00000452372 GAS8O95995 478 aa19.74■□□□□ 0.75
COL9A3-202ENST00000452372 CKMT1AP12532 417 aa19.74■□□□□ 0.75
COL9A3-202ENST00000452372 ACP1P24666 158 aa19.74■□□□□ 0.75
COL9A3-202ENST00000452372 ADCY8P40145 1251 aa19.74■□□□□ 0.75
COL9A3-202ENST00000452372 HADHAP40939 763 aa19.74■□□□□ 0.75
COL9A3-202ENST00000452372 GRIA1P42261 906 aa19.74■□□□□ 0.75
COL9A3-202ENST00000452372 FNTAP49354 379 aa19.74■□□□□ 0.75
COL9A3-202ENST00000452372 ZNF140P52738 457 aaPredicted RBP19.74■□□□□ 0.75
COL9A3-202ENST00000452372 ETF1P62495 437 aaKnown RBP19.74■□□□□ 0.75
COL9A3-202ENST00000452372 BASP1P80723 227 aaKnown RBP19.74■□□□□ 0.75
COL9A3-202ENST00000452372 ITGA9Q13797 1035 aa19.74■□□□□ 0.75
COL9A3-202ENST00000452372 POU6F1Q14863 301 aa19.74■□□□□ 0.75
COL9A3-202ENST00000452372 TCEA2Q15560 299 aa19.74■□□□□ 0.75
COL9A3-202ENST00000452372 TRIP13Q15645 432 aaPredicted RBP19.74■□□□□ 0.75
COL9A3-202ENST00000452372 C6orf132Q5T0Z8 1188 aa19.74■□□□□ 0.75
COL9A3-202ENST00000452372 PPP1R21Q6ZMI0 780 aa19.74■□□□□ 0.75
COL9A3-202ENST00000452372 MARK2Q7KZI7 788 aaKnown RBP19.74■□□□□ 0.75
COL9A3-202ENST00000452372 TAF8Q7Z7C8 310 aa19.74■□□□□ 0.75
COL9A3-202ENST00000452372 PHYKPLQ8IUZ5 450 aa19.74■□□□□ 0.75
COL9A3-202ENST00000452372 OR13C4Q8NGS5 318 aa19.74■□□□□ 0.75
COL9A3-202ENST00000452372 CCL4L1Q8NHW4 92 aa19.74■□□□□ 0.75
COL9A3-202ENST00000452372 NCKIPSDQ9NZQ3 722 aa19.74■□□□□ 0.75
COL9A3-202ENST00000452372 ATXN10Q9UBB4 475 aa19.74■□□□□ 0.75
COL9A3-202ENST00000452372 APPL1Q9UKG1 709 aa19.74■□□□□ 0.75
COL9A3-202ENST00000452372 NEU2Q9Y3R4 380 aa19.74■□□□□ 0.75
COL9A3-202ENST00000452372 ZNF106Q9H2Y7 1883 aaKnown RBP19.73■□□□□ 0.75
COL9A3-202ENST00000452372 LY6G6EA0A0G2JKS1 128 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 GPR89AB7ZAQ6 455 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 NUAK1O60285 661 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 UGT1A9O60656 530 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 RFPL3O75679 317 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 GPR89BP0CG08 455 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 UGT1A6P19224 532 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 UGT1A1P22309 533 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 UGT1A4P22310 534 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 UGT1A3P35503 534 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 UGT1A5P35504 534 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 DAB2P98082 770 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms