RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 ZSCAN5AQ9BUG6 496 aa12.35□□□□□ -0.43
CPSF4-208ENST00000452047 SPATA16Q9BXB7 569 aa12.35□□□□□ -0.43
CPSF4-208ENST00000452047 CARD9Q9H257 536 aa12.35□□□□□ -0.43
CPSF4-208ENST00000452047 UBP1Q9NZI7 540 aa12.35□□□□□ -0.43
CPSF4-208ENST00000452047 ATXN10Q9UBB4 475 aa12.35□□□□□ -0.43
CPSF4-208ENST00000452047 TBC1D29Q9UFV1 150 aa12.35□□□□□ -0.43
CPSF4-208ENST00000452047 SPO11Q9Y5K1 396 aa12.35□□□□□ -0.43
CPSF4-208ENST00000452047 ZNF106Q9H2Y7 1883 aaKnown RBP12.35□□□□□ -0.43
CPSF4-208ENST00000452047 LOC285095A0A1B0GVY8 99 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 SOWAHDA6NJG2 315 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 K7ENP7 123 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 TK2O00142 265 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 HGSO14964 777 aaPredicted RBP12.34□□□□□ -0.43
CPSF4-208ENST00000452047 ZW10O43264 779 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 MTSS1O43312 755 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 NDUFA10O95299 355 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 SLC4A1P02730 911 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 ACP5P13686 325 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 ZNF8P17098 575 aaPredicted RBP12.34□□□□□ -0.43
CPSF4-208ENST00000452047 BPIP17213 487 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 CYLC1P35663 651 aaPredicted RBP12.34□□□□□ -0.43
CPSF4-208ENST00000452047 LIMK2P53671 638 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 VAC14Q08AM6 782 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 BIRC2Q13490 618 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 NOMO1Q15155 1222 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 PPP2R5EQ16537 467 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.34□□□□□ -0.43
CPSF4-208ENST00000452047 NKAIN2Q5VXU1 208 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 PDPK2PQ6A1A2 396 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 INO80CQ6PI98 192 aaPredicted RBP12.34□□□□□ -0.43
CPSF4-208ENST00000452047 BBS12Q6ZW61 710 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 ZC3H18Q86VM9 953 aaKnown RBP12.34□□□□□ -0.43
CPSF4-208ENST00000452047 JAMLQ86YT9 394 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 ZNF567Q8N184 647 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 TRAM1L1Q8N609 369 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 LSM14AQ8ND56 463 aaKnown RBP12.34□□□□□ -0.43
CPSF4-208ENST00000452047 RCBTB1Q8NDN9 531 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 OR4D9Q8NGE8 314 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 SLC39A7Q92504 469 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 GLYATL1Q969I3 302 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 HAUS1Q96CS2 278 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 OXNAD1Q96HP4 312 aaPredicted RBP12.34□□□□□ -0.43
CPSF4-208ENST00000452047 RBM41Q96IZ5 413 aaKnown RBP12.34□□□□□ -0.43
CPSF4-208ENST00000452047 CCDC74BQ96LY2 380 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 QKIQ96PU8 341 aaKnown RBP eCLIP12.34□□□□□ -0.43
CPSF4-208ENST00000452047 HERPUD2Q9BSE4 406 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 GPR63Q9BZJ6 419 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 RBSNQ9H1K0 784 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 ARFGAP3Q9NP61 516 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 LUC7LQ9NQ29 371 aaKnown RBP12.34□□□□□ -0.43
CPSF4-208ENST00000452047 RAD18Q9NS91 495 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 FOXJ2Q9P0K8 574 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 FAM153AQ9UHL3 310 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 KCNK6Q9Y257 313 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 REXO2Q9Y3B8 237 aaKnown RBP12.34□□□□□ -0.43
CPSF4-208ENST00000452047 PIEZO2Q9H5I5 2752 aa12.34□□□□□ -0.43
CPSF4-208ENST00000452047 SDK2Q58EX2 2172 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 HELZ2Q9BYK8 2649 aaKnown RBP12.33□□□□□ -0.44
CPSF4-208ENST00000452047 PRAMEF33A0A0G2JMD5 474 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 HACD1B0YJ81 288 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 GPR89AB7ZAQ6 455 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 C9orf172C9J069 976 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 ERVH48-1M5A8F1 160 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 AGRPO00253 132 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 CHUKO15111 745 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 GRID2O43424 1007 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 PRAMEF10O60809 474 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 C1QL1O75973 258 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 SLC25A14O95258 325 aaPredicted RBP12.33□□□□□ -0.44
CPSF4-208ENST00000452047 EPOP01588 193 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 PRB1P04280 392 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 GPR89BP0CG08 455 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 THRAP10827 490 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 F3P13726 295 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 CTNNA1P35221 906 aaKnown RBP12.33□□□□□ -0.44
CPSF4-208ENST00000452047 HMGCLP35914 325 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 WNT3AP56704 352 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 GPLD1P80108 840 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 TRA2AQ13595 282 aaKnown RBP eCLIP12.33□□□□□ -0.44
CPSF4-208ENST00000452047 SIRPB2Q5JXA9 342 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 ZNF648Q5T619 568 aaPredicted RBP12.33□□□□□ -0.44
CPSF4-208ENST00000452047 IYDQ6PHW0 289 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 ADGRG6Q86SQ4 1221 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 DAAM2Q86T65 1068 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 ZNF761Q86XN6 746 aaPredicted RBP12.33□□□□□ -0.44
CPSF4-208ENST00000452047 PHYKPLQ8IUZ5 450 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 CCDC50Q8IVM0 306 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 HTR3CQ8WXA8 447 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 MRGPRX2Q96LB1 330 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 PLEKHG4BQ96PX9 1271 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 FCRL5Q96RD9 977 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 SRPK1Q96SB4 655 aaKnown RBP12.33□□□□□ -0.44
CPSF4-208ENST00000452047 VAT1Q99536 393 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 OR2AG1Q9H205 316 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 TRIM39Q9HCM9 518 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 SARS2Q9NP81 518 aaKnown RBP12.33□□□□□ -0.44
CPSF4-208ENST00000452047 KCNK4Q9NYG8 393 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 TMEM9Q9P0T7 183 aa12.33□□□□□ -0.44
CPSF4-208ENST00000452047 KLHL8Q9P2G9 620 aaPredicted RBP12.33□□□□□ -0.44
CPSF4-208ENST00000452047 TMPRSS11EQ9UL52 423 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms