RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 PCTPQ9UKL6 214 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 TRAV19A0A0A6YYK7 116 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 FGF4P08620 206 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 TYRP14679 529 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 HNRNPLP14866 589 aaKnown RBP eCLIP6.54□□□□□ -1.36
USP46-202ENST00000451218 MC4RP32245 332 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 CTNNB1P35222 781 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 PSMD8P48556 350 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 HERVK_113P63132 956 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 GUCA2AQ02747 115 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 CBX2Q14781 532 aaPredicted RBP6.54□□□□□ -1.36
USP46-202ENST00000451218 FAM78AQ5JUQ0 283 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 TECPR1Q7Z6L1 1165 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 TBC1D1Q86TI0 1168 aaPredicted RBP6.54□□□□□ -1.36
USP46-202ENST00000451218 SCRN2Q96FV2 425 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 TEX37Q96LM6 180 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 KCNA7Q96RP8 456 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 BTBD10Q9BSF8 475 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 ERVK-6Q9BXR3 956 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 CEP44Q9C0F1 390 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 MUC3BQ9H195 1237 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 CLEC1BQ9P126 229 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 LIMD1Q9UGP4 676 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 SLC27A6Q9Y2P4 619 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 PCDHB9Q9Y5E1 797 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 WNT6Q9Y6F9 365 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.54□□□□□ -1.36
USP46-202ENST00000451218 CFAP73A6NFT4 308 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 TTC34A8MYJ7 566 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 ANKRD28O15084 1053 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 TLL1O43897 1013 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 KERAO60938 352 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 DDX6P26196 483 aaKnown RBP eCLIP6.53□□□□□ -1.36
USP46-202ENST00000451218 RPL26P61254 145 aaKnown RBP6.53□□□□□ -1.36
USP46-202ENST00000451218 LY6G5CQ5SRR4 150 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 RNF187Q5TA31 235 aaPredicted RBP6.53□□□□□ -1.36
USP46-202ENST00000451218 ATG16L1Q676U5 607 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 VRK3Q8IV63 474 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 SUGP1Q8IWZ8 645 aaKnown RBP6.53□□□□□ -1.36
USP46-202ENST00000451218 KCNJ9Q92806 393 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 ASAH2Q9NR71 780 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 SMOXQ9NWM0 555 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 NFKBIL1Q9UBC1 381 aaPredicted RBP6.53□□□□□ -1.36
USP46-202ENST00000451218 RPL26L1Q9UNX3 145 aaKnown RBP6.53□□□□□ -1.36
USP46-202ENST00000451218 ZNF510Q9Y2H8 683 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 SNRNP200O75643 2136 aaKnown RBP6.53□□□□□ -1.36
USP46-202ENST00000451218 KRT87PA6NCN2 255 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 H0Y626 953 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 ECI2O75521 394 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 SRP72O76094 671 aaKnown RBP6.53□□□□□ -1.36
USP46-202ENST00000451218 HNRNPA1P09651 372 aaKnown RBP eCLIP6.53□□□□□ -1.36
USP46-202ENST00000451218 CREB5Q02930 508 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 VEPH1Q14D04 833 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 KIAA0040Q15053 153 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 MYLK3Q32MK0 819 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 C6orf132Q5T0Z8 1188 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 HENMT1Q5T8I9 393 aaKnown RBP6.53□□□□□ -1.36
USP46-202ENST00000451218 CCDC149Q6ZUS6 474 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 TMC7Q7Z402 723 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 KBTBD2Q8IY47 623 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 C12orf76Q8N812 135 aaPredicted RBP6.53□□□□□ -1.36
USP46-202ENST00000451218 GPATCH11Q8N954 259 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 DTX3LQ8TDB6 740 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 GPR21Q99679 349 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 TFB2MQ9H5Q4 396 aaKnown RBP6.53□□□□□ -1.36
USP46-202ENST00000451218 ALG9Q9H6U8 611 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 COPG1Q9Y678 874 aaKnown RBP6.53□□□□□ -1.36
USP46-202ENST00000451218 KCNE1BA0A087WTH5 132 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 PRR19A6NJB7 356 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 MEI4A8MW99 385 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 LPOP22079 712 aaPredicted RBP6.53□□□□□ -1.36
USP46-202ENST00000451218 ATP5F1P24539 256 aaPredicted RBP6.53□□□□□ -1.36
USP46-202ENST00000451218 EPHA3P29320 983 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 UGP2Q16851 508 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 AAK1Q2M2I8 961 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 ACCSLQ4AC99 568 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 ARSIQ5FYB1 569 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 ZNF648Q5T619 568 aaPredicted RBP6.53□□□□□ -1.36
USP46-202ENST00000451218 PDE12Q6L8Q7 609 aaKnown RBP6.53□□□□□ -1.36
USP46-202ENST00000451218 MACC1Q6ZN28 852 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 TUBGCP5Q96RT8 1024 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 DONSONQ9NYP3 566 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 SLC7A8Q9UHI5 535 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 VPS28Q9UK41 221 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 TMEM202A6NGA9 273 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 ATP5BP06576 529 aaKnown RBP6.53□□□□□ -1.36
USP46-202ENST00000451218 TPBGLP0DKB5 382 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 MYL4P12829 197 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 CALB2P22676 271 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 GCKP35557 465 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 OPRD1P41143 372 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 SLC6A11P48066 632 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 ITKQ08881 620 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 FCHO2Q0JRZ9 810 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 CCNIQ14094 377 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 TSNAXIP1Q2TAA8 658 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 SPOUT1Q5T280 376 aaKnown RBP6.53□□□□□ -1.36
USP46-202ENST00000451218 VITQ6UXI7 678 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 HSD11B1LQ7Z5J1 315 aa6.53□□□□□ -1.36
USP46-202ENST00000451218 LRCH3Q96II8 777 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms