RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 USP12O75317 370 aa16.96■□□□□ 0.31
PRPF40A-204ENST00000450303 KELP23276 732 aa16.96■□□□□ 0.31
PRPF40A-204ENST00000450303 VPS41P49754 854 aa16.96■□□□□ 0.31
PRPF40A-204ENST00000450303 SLC14A2Q15849 920 aa16.96■□□□□ 0.31
PRPF40A-204ENST00000450303 LRRC66Q68CR7 880 aa16.96■□□□□ 0.31
PRPF40A-204ENST00000450303 ALG1LQ6GMV1 187 aa16.96■□□□□ 0.31
PRPF40A-204ENST00000450303 WDR93Q6P2C0 686 aa16.96■□□□□ 0.31
PRPF40A-204ENST00000450303 TAF8Q7Z7C8 310 aa16.96■□□□□ 0.31
PRPF40A-204ENST00000450303 HEATR4Q86WZ0 1026 aa16.96■□□□□ 0.31
PRPF40A-204ENST00000450303 SFTPA2Q8IWL1 248 aa16.96■□□□□ 0.31
PRPF40A-204ENST00000450303 NDUFAF2Q8N183 169 aa16.96■□□□□ 0.31
PRPF40A-204ENST00000450303 CCL4L1Q8NHW4 92 aa16.96■□□□□ 0.31
PRPF40A-204ENST00000450303 RBM15Q96T37 977 aaKnown RBP eCLIP16.96■□□□□ 0.313e-8■□□□□ 8.9
PRPF40A-204ENST00000450303 CCDC3Q9BQI4 270 aa16.96■□□□□ 0.31
PRPF40A-204ENST00000450303 ERP44Q9BS26 406 aa16.96■□□□□ 0.31
PRPF40A-204ENST00000450303 RAB6BQ9NRW1 208 aa16.96■□□□□ 0.31
PRPF40A-204ENST00000450303 PPIL1Q9Y3C6 166 aa16.96■□□□□ 0.31
PRPF40A-204ENST00000450303 NEU2Q9Y3R4 380 aa16.96■□□□□ 0.31
PRPF40A-204ENST00000450303 DGKBQ9Y6T7 804 aa16.96■□□□□ 0.31
PRPF40A-204ENST00000450303 ERI2A8K979 691 aaKnown RBP16.95■□□□□ 0.3
PRPF40A-204ENST00000450303 PRLP01236 227 aa16.95■□□□□ 0.3
PRPF40A-204ENST00000450303 MPOP05164 745 aa16.95■□□□□ 0.3
PRPF40A-204ENST00000450303 HOXC4P09017 264 aaPredicted RBP16.95■□□□□ 0.3
PRPF40A-204ENST00000450303 PSMB4P28070 264 aa16.95■□□□□ 0.3
PRPF40A-204ENST00000450303 CD68P34810 354 aaPredicted RBP16.95■□□□□ 0.3
PRPF40A-204ENST00000450303 BASP1P80723 227 aaKnown RBP16.95■□□□□ 0.3
PRPF40A-204ENST00000450303 MPP3Q13368 585 aa16.95■□□□□ 0.3
PRPF40A-204ENST00000450303 RAET1GQ6H3X3 334 aa16.95■□□□□ 0.3
PRPF40A-204ENST00000450303 LVRNQ6Q4G3 990 aa16.95■□□□□ 0.3
PRPF40A-204ENST00000450303 HDXQ7Z353 690 aa16.95■□□□□ 0.3
PRPF40A-204ENST00000450303 TECPR1Q7Z6L1 1165 aa16.95■□□□□ 0.3
PRPF40A-204ENST00000450303 PRUNE1Q86TP1 453 aa16.95■□□□□ 0.3
PRPF40A-204ENST00000450303 ARL10Q8N8L6 244 aa16.95■□□□□ 0.3
PRPF40A-204ENST00000450303 GLIS1Q8NBF1 620 aa16.95■□□□□ 0.3
PRPF40A-204ENST00000450303 FAM46DQ8NEK8 389 aa16.95■□□□□ 0.3
PRPF40A-204ENST00000450303 LPCAT1Q8NF37 534 aa16.95■□□□□ 0.3
PRPF40A-204ENST00000450303 PTCD2Q8WV60 388 aaKnown RBP16.95■□□□□ 0.3
PRPF40A-204ENST00000450303 IMP4Q96G21 291 aaKnown RBP16.95■□□□□ 0.3
PRPF40A-204ENST00000450303 TRIM51Q9BSJ1 452 aa16.95■□□□□ 0.3
PRPF40A-204ENST00000450303 TDRD1Q9BXT4 1180 aaKnown RBP16.95■□□□□ 0.3
PRPF40A-204ENST00000450303 ABCG8Q9H221 673 aa16.95■□□□□ 0.3
PRPF40A-204ENST00000450303 ETNK1Q9HBU6 452 aa16.95■□□□□ 0.3
PRPF40A-204ENST00000450303 PHPT1Q9NRX4 125 aaPredicted RBP16.95■□□□□ 0.3
PRPF40A-204ENST00000450303 FAM153AQ9UHL3 310 aa16.95■□□□□ 0.3
PRPF40A-204ENST00000450303 RABGEF1Q9UJ41 708 aa16.95■□□□□ 0.3
PRPF40A-204ENST00000450303 ARHGEF17Q96PE2 2063 aaPredicted RBP16.95■□□□□ 0.3
PRPF40A-204ENST00000450303 KIF26BQ2KJY2 2108 aa16.94■□□□□ 0.3
PRPF40A-204ENST00000450303 A0A0J9YYE9 177 aa16.94■□□□□ 0.3
PRPF40A-204ENST00000450303 PRSS38A1L453 326 aa16.94■□□□□ 0.3
PRPF40A-204ENST00000450303 SMAPO00193 183 aa16.94■□□□□ 0.3
PRPF40A-204ENST00000450303 PSMD11O00231 422 aa16.94■□□□□ 0.3
PRPF40A-204ENST00000450303 TNFRSF10CO14798 259 aa16.94■□□□□ 0.3
PRPF40A-204ENST00000450303 METTL18O95568 372 aa16.94■□□□□ 0.3
PRPF40A-204ENST00000450303 TRBC1P01850 177 aa16.94■□□□□ 0.3
PRPF40A-204ENST00000450303 FUCA1P04066 466 aa16.94■□□□□ 0.3
PRPF40A-204ENST00000450303 MYCLP1P12525 358 aaPredicted RBP16.94■□□□□ 0.3
PRPF40A-204ENST00000450303 CD86P42081 329 aa16.94■□□□□ 0.3
PRPF40A-204ENST00000450303 POLD2P49005 469 aa16.94■□□□□ 0.3
PRPF40A-204ENST00000450303 SARNPP82979 210 aaKnown RBP16.94■□□□□ 0.3
PRPF40A-204ENST00000450303 PTSQ03393 145 aa16.94■□□□□ 0.3
PRPF40A-204ENST00000450303 CALCOCO2Q13137 446 aa16.94■□□□□ 0.3
PRPF40A-204ENST00000450303 ISXQ2M1V0 245 aa16.94■□□□□ 0.3
PRPF40A-204ENST00000450303 NAT6Q93015 286 aa16.94■□□□□ 0.3
PRPF40A-204ENST00000450303 SCAMP4Q969E2 229 aa16.94■□□□□ 0.3
PRPF40A-204ENST00000450303 CCDC74AQ96AQ1 378 aa16.94■□□□□ 0.3
PRPF40A-204ENST00000450303 SNF8Q96H20 258 aa16.94■□□□□ 0.3
PRPF40A-204ENST00000450303 CRELD1Q96HD1 420 aa16.94■□□□□ 0.3
PRPF40A-204ENST00000450303 TEX101Q9BY14 249 aa16.94■□□□□ 0.3
PRPF40A-204ENST00000450303 CARS2Q9HA77 564 aaKnown RBP16.94■□□□□ 0.3
PRPF40A-204ENST00000450303 ZFHX4Q86UP3 3567 aa16.94■□□□□ 0.3
PRPF40A-204ENST00000450303 DNALI1O14645 258 aaPredicted RBP16.93■□□□□ 0.3
PRPF40A-204ENST00000450303 CLDN7O95471 211 aa16.93■□□□□ 0.3
PRPF40A-204ENST00000450303 CEACAM5P06731 702 aa16.93■□□□□ 0.3
PRPF40A-204ENST00000450303 MMP2P08253 660 aa16.93■□□□□ 0.3
PRPF40A-204ENST00000450303 ITPKBP27987 946 aa16.93■□□□□ 0.3
PRPF40A-204ENST00000450303 GPR1P46091 355 aa16.93■□□□□ 0.3
PRPF40A-204ENST00000450303 GNPDA1P46926 289 aa16.93■□□□□ 0.3
PRPF40A-204ENST00000450303 DRG2P55039 364 aaKnown RBP16.93■□□□□ 0.3
PRPF40A-204ENST00000450303 GABREP78334 506 aa16.93■□□□□ 0.3
PRPF40A-204ENST00000450303 MRPS25P82663 173 aaKnown RBP16.93■□□□□ 0.3
PRPF40A-204ENST00000450303 CBX1P83916 185 aa16.93■□□□□ 0.3
PRPF40A-204ENST00000450303 SKOR1P84550 965 aa16.93■□□□□ 0.3
PRPF40A-204ENST00000450303 CDK3Q00526 305 aa16.93■□□□□ 0.3
PRPF40A-204ENST00000450303 SLC7A5Q01650 507 aa16.93■□□□□ 0.3
PRPF40A-204ENST00000450303 SEMA5AQ13591 1074 aa16.93■□□□□ 0.3
PRPF40A-204ENST00000450303 DOK6Q6PKX4 331 aa16.93■□□□□ 0.3
PRPF40A-204ENST00000450303 KDELC2Q7Z4H8 507 aa16.93■□□□□ 0.3
PRPF40A-204ENST00000450303 PPIL6Q8IXY8 311 aa16.93■□□□□ 0.3
PRPF40A-204ENST00000450303 SDR16C5Q8N3Y7 309 aa16.93■□□□□ 0.3
PRPF40A-204ENST00000450303 TAB3Q8N5C8 712 aaPredicted RBP16.93■□□□□ 0.3
PRPF40A-204ENST00000450303 AP2M1Q96CW1 435 aa16.93■□□□□ 0.3
PRPF40A-204ENST00000450303 ATXN7L3BQ96GX2 97 aa16.93■□□□□ 0.3
PRPF40A-204ENST00000450303 AGAP2Q99490 1192 aa16.93■□□□□ 0.3
PRPF40A-204ENST00000450303 TRIM31Q9BZY9 425 aa16.93■□□□□ 0.3
PRPF40A-204ENST00000450303 DPEP2Q9H4A9 486 aa16.93■□□□□ 0.3
PRPF40A-204ENST00000450303 FAM114A2Q9NRY5 505 aa16.93■□□□□ 0.3
PRPF40A-204ENST00000450303 ZNF446Q9NWS9 450 aa16.93■□□□□ 0.3
PRPF40A-204ENST00000450303 KCTD5Q9NXV2 234 aa16.93■□□□□ 0.3
PRPF40A-204ENST00000450303 TMEM98Q9Y2Y6 226 aa16.93■□□□□ 0.3
PRPF40A-204ENST00000450303 ENTPD2Q9Y5L3 495 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms