RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 LRRTM4Q86VH4 590 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 PSTKQ8IV42 348 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 FAM71AQ8IYT1 594 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 ARL10Q8N8L6 244 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 ZHX1-C8orf76Q96EF9 292 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 PRICKLE1Q96MT3 831 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 CPXM1Q96SM3 734 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 BPIFA1Q9NP55 256 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 GNPTGQ9UJJ9 305 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 ENTPD4Q9Y227 616 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 RGPD3A6NKT7 1758 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 RGPD4Q7Z3J3 1758 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 C16orf96A6NNT2 1141 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 ZNF891A8MT65 544 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 INSIG1O15503 277 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 CCNB2O95067 398 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 DGKAP23743 735 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 CXCR5P32302 372 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 OCRLQ01968 901 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 NHLH1Q02575 133 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 ACY1Q03154 408 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 SNTA1Q13424 505 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 KLHL38Q2WGJ6 581 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 ZNF805Q5CZA5 627 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 KIAA0895LQ68EN5 471 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 ACTL9Q8TC94 416 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 SORCS1Q8WY21 1168 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 CATSPER2Q96P56 530 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 ENAMQ9NRM1 1142 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 TAS2R13Q9NYV9 303 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 LUZP4Q9P127 313 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 CD84Q9UIB8 345 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 A0A1W2PQJ5 194 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 F8W810 466 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 PAPSS1O43252 624 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 PIRTP0C851 137 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 MLNP12872 115 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 GOT1P17174 413 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 PCK1P35558 622 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 SOX11P35716 441 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 TTPAP49638 278 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 DHX9Q08211 1270 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 HTR4Q13639 388 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 RIN1Q13671 783 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 STXBP5Q5T5C0 1151 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 GKAP1Q5VSY0 366 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 FAM151BQ6UXP7 276 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 SPOCD1Q6ZMY3 1216 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 RBFAQ8N0V3 343 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 FGF14Q92915 247 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 ART4Q93070 314 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 TBL1YQ9BQ87 522 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 OR2AG1Q9H205 316 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 IKZF4Q9H2S9 585 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 ARMC7Q9H6L4 198 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 KLHL1Q9NR64 748 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 POLE3Q9NRF9 147 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 ABLIM3O94929 683 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 CD27P26842 260 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 STX2P32856 288 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 NOMO3P69849 1222 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 SLC13A2Q13183 592 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 IL17AQ16552 155 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 WHAMMP3Q1A5X7 153 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 HES3Q5TGS1 186 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 C1orf189Q5VU69 101 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 CAMK1DQ8IU85 385 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 TTC9BQ8N6N2 239 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 ZDHHC1Q8WTX9 485 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 AZIN2Q96A70 460 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 CHFRQ96EP1 664 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 HGH1Q9BTY7 390 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 PABPC3Q9H361 631 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 KCTD10Q9H3F6 313 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 MIEF1Q9NQG6 463 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 KLC4Q9NSK0 619 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 SLCO3A1Q9UIG8 710 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 DOCK7Q96N67 2140 aa5.6□□□□□ -1.51
CDC42BPA-209ENST00000448940 MAGEB16A2A368 324 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 J3QKU1 62 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 ZNF30P17039 623 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 KEAP1Q14145 624 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 PDSS1Q5T2R2 415 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 EGFLAMQ63HQ2 1017 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 CAPRIN2Q6IMN6 1127 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 LVRNQ6Q4G3 990 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 KIAA0907Q7Z7F0 614 aaPredicted RBP5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 ZNF670Q9BS34 389 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 SLC39A8Q9C0K1 460 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 ACTR8Q9H981 624 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 NMUR1Q9HB89 426 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 PCDHGA5Q9Y5G8 931 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 STYXL1Q9Y6J8 313 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 TTC3P53804 2025 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 C5orf60A6NFR6 353 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 ARGFXA6NJG6 315 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 SDR42E2A6NKP2 422 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 TLR4O00206 839 aa5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 AFF1P51825 1210 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-209ENST00000448940 CASP9P55211 416 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms