RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 BAHD1Q8TBE0 780 aaPredicted RBP13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 DNAJC1Q96KC8 554 aaKnown RBP13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 OR2M4Q96R27 311 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 GSDMCQ9BYG8 508 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 ZCCHC2Q9C0B9 1178 aaKnown RBP13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 CLPBQ9H078 707 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 TMEM168Q9H0V1 697 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 OR2AG1Q9H205 316 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 ASB8Q9H765 288 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 ARFGAP3Q9NP61 516 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 NLE1Q9NVX2 485 aaPredicted RBP13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 TRNAU1APQ9NX07 287 aaKnown RBP13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 NCKIPSDQ9NZQ3 722 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 BFARQ9NZS9 450 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 PCYOX1Q9UHG3 505 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 APOBEC2Q9Y235 224 aaKnown RBP13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 OAS3Q9Y6K5 1087 aaKnown RBP13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 CCDC78A2IDD5 438 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 KIF2AO00139 706 aaPredicted RBP13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 VEGFDO43915 354 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 UGT1A9O60656 530 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 MTX2O75431 263 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 CKMT2P17540 419 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 UGT1A6P19224 532 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 UGT1A1P22309 533 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 UGT1A4P22310 534 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 UGT1A3P35503 534 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 UGT1A5P35504 534 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 NPY2RP49146 381 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 RPIAP49247 311 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 DR1Q01658 176 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 KCTD19Q17RG1 926 aaPredicted RBP13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 PYCR3Q53H96 274 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 CCDC157Q569K6 752 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 LDLRAP1Q5SW96 308 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 C6orf132Q5T0Z8 1188 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 ZNF648Q5T619 568 aaPredicted RBP13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 N4BP2L1Q5TBK1 243 aaPredicted RBP13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 LRRC8BQ6P9F7 803 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 SYDE1Q6ZW31 735 aaPredicted RBP13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 NLRP9Q7RTR0 991 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 ZNF592Q92610 1267 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 SLCO2A1Q92959 643 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 ULK4Q96C45 1275 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 SCARF2Q96GP6 870 aaPredicted RBP13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 RANBP9Q96S59 729 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 UGT1A7Q9HAW7 530 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 UGT1A10Q9HAW8 530 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 UGT1A8Q9HAW9 530 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 ATXN10Q9UBB4 475 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 CRLS1Q9UJA2 301 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 GPR34Q9UPC5 381 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 SPTBN2O15020 2390 aa13.88□□□□□ -0.19
GTF3C3-206ENST00000448539 MROH6A6NGR9 719 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 CCL22O00626 93 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 GRID2O43424 1007 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 NUAK1O60285 661 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 DNAJC6O75061 913 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 CDK14O94921 469 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 FUCA1P04066 466 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 CELA2BP08218 269 aaPredicted RBP13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 FTH1P19P0C7X4 201 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 GIMD1P0DJR0 217 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 ZNF8P17098 575 aaPredicted RBP13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 MSH3P20585 1137 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 AKT1P31749 480 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 MC4RP32245 332 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 MAGEA6P43360 314 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 TMEM115Q12893 351 aaPredicted RBP13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 NFATC2Q13469 925 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 PTK6Q13882 451 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 LRP8Q14114 963 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 KCNJ11Q14654 390 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 NR0B2Q15466 257 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 PROX2Q3B8N5 592 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 ZRANB3Q5FWF4 1079 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 PCID2Q5JVF3 399 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 TSTD2Q5T7W7 516 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 CHST15Q7LFX5 561 aaPredicted RBP13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 SNX20Q7Z614 316 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 PCGF5Q86SE9 256 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 ADGRG6Q86SQ4 1221 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 PPIL6Q8IXY8 311 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 FAM181AQ8N9Y4 354 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 FAM46DQ8NEK8 389 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 CCL4L1Q8NHW4 92 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 GPBAR1Q8TDU6 330 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 PTCD2Q8WV60 388 aaKnown RBP13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 CPT1BQ92523 772 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 DCUN1D1Q96GG9 259 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 CDKN2AIPNLQ96HQ2 116 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 APOLD1Q96LR9 279 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 IL22Q9GZX6 179 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 DPEP2Q9H4A9 486 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 SMOXQ9NWM0 555 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 SIRPGQ9P1W8 387 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 GULP1Q9UBP9 304 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 NEU2Q9Y3R4 380 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 TCAF1Q9Y4C2 921 aa13.87□□□□□ -0.19
GTF3C3-206ENST00000448539 TDRD6O60522 2096 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms