RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 TIGD7Q6NT04 549 aaPredicted RBP13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 DRICH1Q6PGQ1 229 aaPredicted RBP13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 USP53Q70EK8 1073 aa13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 ZNF567Q8N184 647 aa13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 BBS5Q8N3I7 341 aa13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 NOA1Q8NC60 698 aaKnown RBP13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 NSMCE3Q96MG7 304 aa13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 AGAP3Q96P47 875 aa13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 TRIM51Q9BSJ1 452 aa13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 FRMD8P1Q9BZ68 369 aaPredicted RBP13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 WDR26Q9H7D7 661 aa13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 FGF22Q9HCT0 170 aa13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 MRPL40Q9NQ50 206 aaKnown RBP13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 PHPT1Q9NRX4 125 aaPredicted RBP13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 RBM22Q9NW64 420 aaKnown RBP eCLIP13.69□□□□□ -0.224e-6■■■■□ 24.3
PDLIM2-213ENST00000448520 WDR70Q9NW82 654 aa13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 PISDQ9UG56 409 aa13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 AMACRQ9UHK6 382 aa13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 MOSPD1Q9UJG1 213 aa13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 LOXL2Q9Y4K0 774 aa13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 TTLL3Q9Y4R7 772 aa13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 PCDHB11Q9Y5F2 797 aa13.69□□□□□ -0.22
PDLIM2-213ENST00000448520 PRSS38A1L453 326 aa13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 CCDC188H7C350 402 aa13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 HTRA2O43464 458 aaPredicted RBP13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 SOCS5O75159 536 aa13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 LIPCP11150 499 aa13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 CD82P27701 267 aa13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 CD68P34810 354 aaPredicted RBP13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 DSC2Q02487 901 aa13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 TUBB2AQ13885 445 aa13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 IHHQ14623 411 aa13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 RALGPS1Q5JS13 557 aa13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 TMEM164Q5U3C3 297 aa13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 MARC1Q5VT66 337 aa13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 SPRED1Q7Z699 444 aa13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 PIM3Q86V86 326 aa13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 LRRC49Q8IUZ0 686 aa13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 CBARPQ8N350 705 aaPredicted RBP13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 TEX26Q8N6G2 289 aa13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 GPBAR1Q8TDU6 330 aa13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 SGF29Q96ES7 293 aa13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 COQ10AQ96MF6 247 aa13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 TUBB2BQ9BVA1 445 aa13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 LGR4Q9BXB1 951 aa13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 GSDMCQ9BYG8 508 aa13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 BRD8Q9H0E9 1235 aa13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 TRNAU1APQ9NX07 287 aaKnown RBP13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 KLHL8Q9P2G9 620 aaPredicted RBP13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 PHTF1Q9UMS5 762 aa13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 DRG1Q9Y295 367 aaKnown RBP13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 RNF215Q9Y6U7 377 aa13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 SPTA1P02549 2419 aa13.68□□□□□ -0.22
PDLIM2-213ENST00000448520 CTAGE15A4D2H0 777 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 A8MX80 341 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 B4DGG1 531 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 PSMD11O00231 422 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 TTI1O43156 1089 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 RAD51CO43502 376 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 CPNE6O95741 557 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 ITGB2P05107 769 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 CTAGE8P0CG41 777 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 CYP2A6P11509 494 aaPredicted RBP13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 SFTPCP11686 197 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 MYCLP1P12525 358 aaPredicted RBP13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 HGFP14210 728 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 GM2AP17900 193 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 NFKB1P19838 968 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 TEAD1P28347 426 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 FNTAP49354 379 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 TERF1P54274 439 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 B4GALNT1Q00973 533 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 NIPAL4Q0D2K0 466 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 ILF3Q12906 894 aaKnown RBP eCLIP13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 ZNF235Q14590 738 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 ANKRD20A2Q5SQ80 823 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 ANKRD20A1Q5TYW2 823 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 ANKRD20A3Q5VUR7 823 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 KCTD16Q68DU8 428 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 GSTA5Q7RTV2 222 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 PID1Q7Z2X4 250 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 CTAGE6Q86UF2 777 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 C17orf82Q86X59 251 aaPredicted RBP13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 CTAGE4Q8IX94 777 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 ZSCAN1Q8NBB4 408 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 CCL4L1Q8NHW4 92 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 NSMCE1Q8WV22 266 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 NUS1Q96E22 293 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 SPATA13Q96N96 652 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 NUDCD1Q96RS6 583 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 GORASP1Q9BQQ3 440 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 TEX101Q9BY14 249 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 HOMER3Q9NSC5 361 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 B4GALT6Q9UBX8 382 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 NEU2Q9Y3R4 380 aa13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 SETXQ7Z333 2677 aaKnown RBP13.67□□□□□ -0.22
PDLIM2-213ENST00000448520 ASH1LQ9NR48 2969 aaKnown RBP13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 RHPN2P1A8MT19 583 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 B4GAT1O43505 415 aa13.66□□□□□ -0.22
PDLIM2-213ENST00000448520 HEXIM1O94992 359 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms