RNA–Protein interactions for RNA: ENST00000448395.6

KNSTRN-203, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2 BASIC

Gene KNSTRN, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-203ENST00000448395 ATP13A3Q9H7F0 1226 aa12.12□□□□□ -0.47
KNSTRN-203ENST00000448395 CXXC1Q9P0U4 656 aaPredicted RBP12.12□□□□□ -0.47
KNSTRN-203ENST00000448395 GALPQ9UBC7 116 aa12.12□□□□□ -0.47
KNSTRN-203ENST00000448395 STOML1Q9UBI4 398 aa12.12□□□□□ -0.47
KNSTRN-203ENST00000448395 EVLQ9UI08 416 aaPredicted RBP12.12□□□□□ -0.47
KNSTRN-203ENST00000448395 MCM8Q9UJA3 840 aa12.12□□□□□ -0.47
KNSTRN-203ENST00000448395 TRMT6Q9UJA5 497 aaKnown RBP12.12□□□□□ -0.47
KNSTRN-203ENST00000448395 IKZF3Q9UKT9 509 aa12.12□□□□□ -0.47
KNSTRN-203ENST00000448395 FAM50BQ9Y247 325 aa12.12□□□□□ -0.47
KNSTRN-203ENST00000448395 LRRC42Q9Y546 428 aa12.12□□□□□ -0.47
KNSTRN-203ENST00000448395 PCDHB1Q9Y5F3 818 aa12.12□□□□□ -0.47
KNSTRN-203ENST00000448395 COPG1Q9Y678 874 aaKnown RBP12.12□□□□□ -0.47
KNSTRN-203ENST00000448395 CFAP54Q96N23 3096 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 REV3LO60673 3130 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 TRBV5-4A0A0C4DH59 114 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 H0Y3Z8 333 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 GAPDHSO14556 408 aaPredicted RBP12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 OR1I1O60431 355 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 MOSPD3O75425 235 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 ECI2O75521 394 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 CDK14O94921 469 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 ALPIP09923 528 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 CTPS1P17812 591 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 ATP4BP51164 291 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 PTPN5P54829 565 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 SLC34A1Q06495 639 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 SQLEQ14534 574 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 ZRSR2Q15696 482 aaKnown RBP12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 PFKFB4Q16877 469 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 CMPK2Q5EBM0 449 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 PITRM1Q5JRX3 1037 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 DGKKQ5KSL6 1271 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 C1orf146Q5VVC0 180 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 UGT3A1Q6NUS8 523 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 C16orf89Q6UX73 402 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 CYHR1Q6ZMK1 362 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 TPGS1Q6ZTW0 290 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 TAS2R42Q7RTR8 314 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 DEFB107AQ8IZN7 70 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 KYQ8NBH2 561 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 OR2AP1Q8NGE2 309 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 CD200R1Q8TD46 325 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 FUBP1Q96AE4 644 aaKnown RBP12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 PDLIM5Q96HC4 596 aaKnown RBP12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 TUBGCP5Q96RT8 1024 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 LYSMD1Q96S90 227 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 GAS2L1Q99501 681 aaPredicted RBP12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 SLC30A3Q99726 388 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 TACO1Q9BSH4 297 aaKnown RBP12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 PLK2Q9NYY3 685 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 PRKAG2Q9UGJ0 569 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 CDH22Q9UJ99 828 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 RNF112Q9ULX5 631 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 PRPF19Q9UMS4 504 aaKnown RBP12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 HS3ST2Q9Y278 367 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 PPIL1Q9Y3C6 166 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 SLC30A1Q9Y6M5 507 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 WDFY4Q6ZS81 3184 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 CHD9Q3L8U1 2897 aa12.11□□□□□ -0.47
KNSTRN-203ENST00000448395 NOTCH4Q99466 2003 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 USP34Q70CQ2 3546 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 FAM86C2PA6NEL3 165 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 CAPN8A6NHC0 703 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 HIDE1A8MVS5 230 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 SUPT3HB4E1H0 165 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 CDC7O00311 574 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 PRMT5O14744 637 aaPredicted RBP12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 NIPSNAP2O75323 286 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 FKBP6O75344 327 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 SUPT3HO75486 399 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 SKAP2O75563 359 aaPredicted RBP12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 RPS17P08708 135 aaKnown RBP12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 SRCP12931 536 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 GFAPP14136 432 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 CD1EP15812 388 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 PTPN2P17706 415 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 HNF1BP35680 557 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 PTDSS1P48651 473 aaKnown RBP12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 CLCN7P51798 805 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 MTTPP55157 894 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 IL2P60568 153 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 SNRPD1P62314 119 aaKnown RBP12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 SH3BP2P78314 561 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 TBL3Q12788 808 aaKnown RBP12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 PTK2BQ14289 1009 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 TSNQ15631 228 aaKnown RBP12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 TMEM240Q5SV17 173 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 LYPLAL1Q5VWZ2 237 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 KANK2Q63ZY3 851 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 AAGABQ6PD74 315 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 TXNDC11Q6PKC3 985 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 LARP4Q71RC2 724 aaKnown RBP eCLIP12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 SNX20Q7Z614 316 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 CMTM8Q8IZV2 173 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 FBXW8Q8N3Y1 598 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 FBXO39Q8N4B4 442 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 SIDT2Q8NBJ9 832 aaKnown RBP12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 GIMAP7Q8NHV1 300 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 SPPL3Q8TCT6 385 aa12.1□□□□□ -0.47
KNSTRN-203ENST00000448395 KCNV2Q8TDN2 545 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms