RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 NEDD8Q15843 81 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 PTPRNQ16849 979 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 SMUG1Q53HV7 270 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 GPR107Q5VW38 600 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 CPNE9Q8IYJ1 553 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 ADGRG5Q8IZF4 528 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 MINDY1Q8N5J2 469 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 KLHDC9Q8NEP7 349 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 MYEOVQ96EZ4 313 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 CDKN2AIPNLQ96HQ2 116 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 SUSD3Q96L08 255 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 RNF145Q96MT1 663 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 CDK15Q96Q40 435 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 ATOH8Q96SQ7 321 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 AARSD1Q9BTE6 412 aaKnown RBP12.83□□□□□ -0.36
SHC1-210ENST00000448116 HGH1Q9BTY7 390 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 PRDM5Q9NQX1 630 aaPredicted RBP12.83□□□□□ -0.36
SHC1-210ENST00000448116 TMEM248Q9NWD8 314 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 TMX2-CTNND1H3BSU7 103 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 LSM1O15116 133 aaKnown RBP12.82□□□□□ -0.36
SHC1-210ENST00000448116 KPNA6O60684 536 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 CHEK2O96017 543 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 CYBBP04839 570 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 FGF4P08620 206 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 IDO1P14902 403 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 SLC26A3P40879 764 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 RAD51Q06609 339 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 LCP2Q13094 533 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 C16orf72Q14CZ0 275 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 DHRSXQ8N5I4 330 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 EFHBQ8N7U6 833 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 CDYL2Q8N8U2 506 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 TRPV3Q8NET8 790 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 HM13Q8TCT9 377 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.82□□□□□ -0.36
SHC1-210ENST00000448116 ASB2Q96Q27 587 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 SDR39U1Q9NRG7 319 aaPredicted RBP12.82□□□□□ -0.36
SHC1-210ENST00000448116 TAS2R13Q9NYV9 303 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 TMEM98Q9Y2Y6 226 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 A0A0D9SEW6 157 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 A0A0U1RQF3 1178 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 LOC285095A0A1B0GVY8 99 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 CCDC154A6NI56 674 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 SNX2O60749 519 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 CELF2O95319 508 aaKnown RBP12.82□□□□□ -0.36
SHC1-210ENST00000448116 SERPINF2P08697 491 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 PCNAP12004 261 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 BNIP2Q12982 314 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 KANK2Q63ZY3 851 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 UGT3A1Q6NUS8 523 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 BLOC1S3Q6QNY0 202 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 MRPL10Q7Z7H8 261 aaKnown RBP12.82□□□□□ -0.36
SHC1-210ENST00000448116 OR7D4Q8NG98 312 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 NUDT8Q8WV74 236 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 DUS3LQ96G46 650 aaKnown RBP12.82□□□□□ -0.36
SHC1-210ENST00000448116 SLC39A13Q96H72 371 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 POLR1BQ9H9Y6 1135 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 SYTL2Q9HCH5 934 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 BPIFA1Q9NP55 256 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 AGPAT4Q9NRZ5 378 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 SQORQ9Y6N5 450 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 DLGAP1O14490 977 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 B4GALT3O60512 393 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 AKR1A1P14550 325 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 ENTPD1P49961 510 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 PHYKPLQ8IUZ5 450 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 DCP1BQ8IZD4 617 aaKnown RBP12.82□□□□□ -0.36
SHC1-210ENST00000448116 FNDC5Q8NAU1 212 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 BRSK1Q8TDC3 778 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 C12orf43Q96C57 262 aaKnown RBP12.82□□□□□ -0.36
SHC1-210ENST00000448116 INTS7Q9NVH2 962 aaKnown RBP12.82□□□□□ -0.36
SHC1-210ENST00000448116 CD274Q9NZQ7 290 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 ANAPC2Q9UJX6 822 aa12.82□□□□□ -0.36
SHC1-210ENST00000448116 WASH4PA8MWX3 477 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 SYNCRIPO60506 623 aaKnown RBP12.81□□□□□ -0.36
SHC1-210ENST00000448116 WISP3O95389 354 aaPredicted RBP12.81□□□□□ -0.36
SHC1-210ENST00000448116 FGF1P05230 155 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 HSD17B1P14061 328 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 PBX3P40426 434 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 STC1P52823 247 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 NFKB2Q00653 900 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 TAF10Q12962 218 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 PLA2G4EQ3MJ16 856 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 BTN2A3PQ96KV6 586 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 SEPT5Q99719 369 aaPredicted RBP12.81□□□□□ -0.36
SHC1-210ENST00000448116 TFB2MQ9H5Q4 396 aaKnown RBP12.81□□□□□ -0.36
SHC1-210ENST00000448116 CXorf21Q9HAI6 301 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 SPO11Q9Y5K1 396 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 SLC22A3O75751 556 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 SNAP29O95721 258 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 HLA-DPA1P20036 260 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 IL10RBQ08334 325 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 SERINC3Q13530 473 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 PTPRRQ15256 657 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 TMEM214Q6NUQ4 689 aaKnown RBP12.81□□□□□ -0.36
SHC1-210ENST00000448116 NANOGNBQ7Z5D8 188 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 SYVN1Q86TM6 617 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 LGI2Q8N0V4 545 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 C2orf69Q8N8R5 385 aa12.81□□□□□ -0.36
SHC1-210ENST00000448116 TMEM125Q96AQ2 219 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms