RNA–Protein interactions for RNA: ENST00000447419.6

PTX4-203, Transcript of pentraxin 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTX4, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-203ENST00000447419 DNAJC1Q96KC8 554 aaKnown RBP20.32■□□□□ 0.84
PTX4-203ENST00000447419 TBATAQ96M53 351 aa20.32■□□□□ 0.84
PTX4-203ENST00000447419 BOCQ9BWV1 1114 aa20.32■□□□□ 0.84
PTX4-203ENST00000447419 ARNT2Q9HBZ2 717 aa20.32■□□□□ 0.84
PTX4-203ENST00000447419 WASF3Q9UPY6 502 aa20.32■□□□□ 0.84
PTX4-203ENST00000447419 KCNK6Q9Y257 313 aa20.32■□□□□ 0.84
PTX4-203ENST00000447419 TRBV23OR9-2A0A075B6M9 112 aa20.31■□□□□ 0.84
PTX4-203ENST00000447419 TPP1O14773 563 aa20.31■□□□□ 0.84
PTX4-203ENST00000447419 LDB2O43679 373 aa20.31■□□□□ 0.84
PTX4-203ENST00000447419 PRAMEF1O95521 474 aa20.31■□□□□ 0.84
PTX4-203ENST00000447419 CRTAMO95727 393 aa20.31■□□□□ 0.84
PTX4-203ENST00000447419 ACP5P13686 325 aa20.31■□□□□ 0.84
PTX4-203ENST00000447419 ACTR1BP42025 376 aa20.31■□□□□ 0.84
PTX4-203ENST00000447419 ACTR1AP61163 376 aa20.31■□□□□ 0.84
PTX4-203ENST00000447419 ILF3Q12906 894 aaKnown RBP eCLIP20.31■□□□□ 0.84
PTX4-203ENST00000447419 SEMA5AQ13591 1074 aa20.31■□□□□ 0.84
PTX4-203ENST00000447419 NR0B2Q15466 257 aa20.31■□□□□ 0.84
PTX4-203ENST00000447419 PERM1Q5SV97 790 aa20.31■□□□□ 0.84
PTX4-203ENST00000447419 PHYKPLQ8IUZ5 450 aa20.31■□□□□ 0.84
PTX4-203ENST00000447419 FAM181AQ8N9Y4 354 aa20.31■□□□□ 0.84
PTX4-203ENST00000447419 CDH19Q9H159 772 aa20.31■□□□□ 0.84
PTX4-203ENST00000447419 TAAR2Q9P1P5 351 aa20.31■□□□□ 0.84
PTX4-203ENST00000447419 NFKBIL1Q9UBC1 381 aaPredicted RBP20.31■□□□□ 0.84
PTX4-203ENST00000447419 ANGPTL2Q9UKU9 493 aa20.31■□□□□ 0.84
PTX4-203ENST00000447419 LRP4O75096 1905 aa20.3■□□□□ 0.84
PTX4-203ENST00000447419 PSMD3O43242 534 aa20.3■□□□□ 0.84
PTX4-203ENST00000447419 PRSS56P0CW18 603 aa20.3■□□□□ 0.84
PTX4-203ENST00000447419 ACP1P24666 158 aa20.3■□□□□ 0.84
PTX4-203ENST00000447419 COILP38432 576 aaPredicted RBP20.3■□□□□ 0.84
PTX4-203ENST00000447419 ZNF140P52738 457 aaPredicted RBP20.3■□□□□ 0.84
PTX4-203ENST00000447419 CCDC137Q6PK04 289 aaKnown RBP20.3■□□□□ 0.84
PTX4-203ENST00000447419 ACTRT1Q8TDG2 376 aa20.3■□□□□ 0.84
PTX4-203ENST00000447419 GPBAR1Q8TDU6 330 aa20.3■□□□□ 0.84
PTX4-203ENST00000447419 NAPGQ99747 312 aaPredicted RBP20.3■□□□□ 0.84
PTX4-203ENST00000447419 SYNDIG1Q9H7V2 258 aa20.3■□□□□ 0.84
PTX4-203ENST00000447419 HOMER3Q9NSC5 361 aa20.3■□□□□ 0.84
PTX4-203ENST00000447419 PADI4Q9UM07 663 aa20.3■□□□□ 0.84
PTX4-203ENST00000447419 COL5A1P20908 1838 aaPredicted RBP20.29■□□□□ 0.84
PTX4-203ENST00000447419 TCRBV7S3A2A0A539 114 aa20.29■□□□□ 0.84
PTX4-203ENST00000447419 DKK1O94907 266 aa20.29■□□□□ 0.84
PTX4-203ENST00000447419 MAZP56270 477 aaKnown RBP20.29■□□□□ 0.84
PTX4-203ENST00000447419 GPS1Q13098 491 aa20.29■□□□□ 0.84
PTX4-203ENST00000447419 DET1Q7L5Y6 550 aa20.29■□□□□ 0.84
PTX4-203ENST00000447419 ARL10Q8N8L6 244 aa20.29■□□□□ 0.84
PTX4-203ENST00000447419 CCDC97Q96F63 343 aaPredicted RBP20.29■□□□□ 0.84
PTX4-203ENST00000447419 SCARF2Q96GP6 870 aaPredicted RBP20.29■□□□□ 0.84
PTX4-203ENST00000447419 NAP1L3Q99457 506 aaPredicted RBP20.29■□□□□ 0.84
PTX4-203ENST00000447419 GSDMCQ9BYG8 508 aa20.29■□□□□ 0.84
PTX4-203ENST00000447419 TRIM39Q9HCM9 518 aa20.29■□□□□ 0.84
PTX4-203ENST00000447419 TRNAU1APQ9NX07 287 aaKnown RBP20.29■□□□□ 0.84
PTX4-203ENST00000447419 VPS18Q9P253 973 aa20.29■□□□□ 0.84
PTX4-203ENST00000447419 GRID2O43424 1007 aa20.28■□□□□ 0.84
PTX4-203ENST00000447419 SNX2O60749 519 aa20.28■□□□□ 0.84
PTX4-203ENST00000447419 TRIM16O95361 564 aa20.28■□□□□ 0.84
PTX4-203ENST00000447419 EML2O95834 649 aa20.28■□□□□ 0.84
PTX4-203ENST00000447419 KRT14P02533 472 aa20.28■□□□□ 0.84
PTX4-203ENST00000447419 CDKN1CP49918 316 aaPredicted RBP20.28■□□□□ 0.84
PTX4-203ENST00000447419 SESN2P58004 480 aaPredicted RBP20.28■□□□□ 0.84
PTX4-203ENST00000447419 CRADDP78560 199 aa20.28■□□□□ 0.84
PTX4-203ENST00000447419 CDH17Q12864 832 aa20.28■□□□□ 0.84
PTX4-203ENST00000447419 LINC00523Q86TU6 105 aa20.28■□□□□ 0.84
PTX4-203ENST00000447419 ZNF398Q8TD17 642 aa20.28■□□□□ 0.84
PTX4-203ENST00000447419 ASB8Q9H765 288 aa20.28■□□□□ 0.84
PTX4-203ENST00000447419 RABGEF1Q9UJ41 708 aa20.28■□□□□ 0.84
PTX4-203ENST00000447419 DNAJC16Q9Y2G8 782 aa20.28■□□□□ 0.84
PTX4-203ENST00000447419 ARID1BQ8NFD5 2236 aaPredicted RBP20.28■□□□□ 0.84
PTX4-203ENST00000447419 CTAGE9A4FU28 777 aa20.27■□□□□ 0.84
PTX4-203ENST00000447419 OR51F1A6NGY5 319 aa20.27■□□□□ 0.84
PTX4-203ENST00000447419 NUAK1O60285 661 aa20.27■□□□□ 0.84
PTX4-203ENST00000447419 NOBOXO60393 691 aa20.27■□□□□ 0.84
PTX4-203ENST00000447419 PHF2O75151 1096 aa20.27■□□□□ 0.84
PTX4-203ENST00000447419 SRP72O76094 671 aaKnown RBP20.27■□□□□ 0.84
PTX4-203ENST00000447419 SUN1O94901 812 aa20.27■□□□□ 0.84
PTX4-203ENST00000447419 CDK14O94921 469 aa20.27■□□□□ 0.84
PTX4-203ENST00000447419 TCP1P17987 556 aaKnown RBP20.27■□□□□ 0.84
PTX4-203ENST00000447419 XIAPP98170 497 aa20.27■□□□□ 0.84
PTX4-203ENST00000447419 FOXK2Q01167 660 aa20.27■□□□□ 0.84
PTX4-203ENST00000447419 PEX6Q13608 980 aa20.27■□□□□ 0.84
PTX4-203ENST00000447419 GPRC6AQ5T6X5 926 aa20.27■□□□□ 0.84
PTX4-203ENST00000447419 HES3Q5TGS1 186 aa20.27■□□□□ 0.84
PTX4-203ENST00000447419 PDPK2PQ6A1A2 396 aa20.27■□□□□ 0.84
PTX4-203ENST00000447419 LVRNQ6Q4G3 990 aa20.27■□□□□ 0.84
PTX4-203ENST00000447419 Q8N9G6 341 aaPredicted RBP20.27■□□□□ 0.84
PTX4-203ENST00000447419 ZDHHC1Q8WTX9 485 aa20.27■□□□□ 0.84
PTX4-203ENST00000447419 GLMNQ92990 594 aa20.27■□□□□ 0.84
PTX4-203ENST00000447419 VPS35Q96QK1 796 aa20.27■□□□□ 0.84
PTX4-203ENST00000447419 DDX47Q9H0S4 455 aaKnown RBP20.27■□□□□ 0.84
PTX4-203ENST00000447419 OSGEPL1Q9H4B0 414 aa20.27■□□□□ 0.84
PTX4-203ENST00000447419 SLC23A2Q9UGH3 650 aa20.27■□□□□ 0.84
PTX4-203ENST00000447419 SLC2A6Q9UGQ3 507 aa20.27■□□□□ 0.84
PTX4-203ENST00000447419 FEZ2Q9UHY8 353 aaPredicted RBP20.27■□□□□ 0.84
PTX4-203ENST00000447419 ASPMQ8IZT6 3477 aa20.27■□□□□ 0.84
PTX4-203ENST00000447419 ECEL1O95672 775 aa20.27■□□□□ 0.83
PTX4-203ENST00000447419 AKT1P31749 480 aa20.27■□□□□ 0.83
PTX4-203ENST00000447419 MC4RP32245 332 aa20.27■□□□□ 0.83
PTX4-203ENST00000447419 RPIAP49247 311 aa20.27■□□□□ 0.83
PTX4-203ENST00000447419 DUSP3P51452 185 aaPredicted RBP20.27■□□□□ 0.83
PTX4-203ENST00000447419 ARSDP51689 593 aa20.27■□□□□ 0.83
PTX4-203ENST00000447419 INSM1Q01101 510 aaPredicted RBP20.27■□□□□ 0.83
PTX4-203ENST00000447419 TMEM115Q12893 351 aaPredicted RBP20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms