RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 FBXO39Q8N4B4 442 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 NKAPQ8N5F7 415 aaKnown RBP9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 CLDN19Q8N6F1 224 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 RHEBL1Q8TAI7 183 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 GRIN3AQ8TCU5 1115 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 TRPC4APQ8TEL6 797 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 CYB5D2Q8WUJ1 264 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 L3HYPDHQ96EM0 354 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 NSUN5Q96P11 429 aaKnown RBP9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 ATOH8Q96SQ7 321 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 TTC1Q99614 292 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 BOCQ9BWV1 1114 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 CLPBQ9H078 707 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 MTIF3Q9H2K0 278 aaKnown RBP9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 SUV39H2Q9H5I1 410 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 UTP6Q9NYH9 597 aaKnown RBP9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 CRLS1Q9UJA2 301 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 RPL26L1Q9UNX3 145 aaKnown RBP9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 PLA2G4CQ9UP65 541 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 HS3ST2Q9Y278 367 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 MRPS23Q9Y3D9 190 aaKnown RBP9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 RWDD3Q9Y3V2 267 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 OAS3Q9Y6K5 1087 aaKnown RBP9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 GLYATL1P3A0A0U1RQE8 302 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 ATP6AP2A0A1C7CYW4 349 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 CAPN8A6NHC0 703 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 SDHDO14521 159 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 PRMT5O14744 637 aaPredicted RBP9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 KERAO60938 352 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 PEX11AO75192 247 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 ATP6AP2O75787 350 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 WFS1O76024 890 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 TRIM16O95361 564 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 PENKP01210 267 aaPredicted RBP9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 ESR1P03372 595 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 HSPA1AP0DMV8 641 aaKnown RBP9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 HSPA1BP0DMV9 641 aaKnown RBP9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 ZNF7P17097 686 aaPredicted RBP9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 BPIP17213 487 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 CEBPBP17676 345 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 PIK3R1P27986 724 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 EEF1DP29692 281 aaKnown RBP9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 PPARGP37231 505 aaPredicted RBP9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 C1QTNF8P60827 252 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 ATP6V0D1P61421 351 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 SH3BP2P78314 561 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 UBE3AQ05086 875 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 NFATC2Q13469 925 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 CHRNA6Q15825 494 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 NAIF1Q69YI7 327 aaPredicted RBP9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 FAM109BQ6ICB4 259 aaPredicted RBP9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 UGT3A1Q6NUS8 523 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 UBE2Q1Q7Z7E8 422 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 ULK2Q8IYT8 1036 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 STK40Q8N2I9 435 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 EFCAB3Q8N7B9 438 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 CHST14Q8NCH0 376 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 CEP70Q8NHQ1 597 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 ITFG1Q8TB96 612 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 CD200R1Q8TD46 325 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 KCNV2Q8TDN2 545 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 ESAMQ96AP7 390 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 FAR2Q96K12 515 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 CCDC28BQ9BUN5 200 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 CIPCQ9C0C6 399 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 C1orf21Q9H246 121 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 MID1IP1Q9NPA3 183 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 SEMA4BQ9NPR2 832 aaPredicted RBP9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 TBC1D14Q9P2M4 693 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 COMMD10Q9Y6G5 202 aa9.45□□□□□ -0.9
COL6A4P1-201ENST00000446690 MAGEC1O60732 1142 aa9.44□□□□□ -0.9
COL6A4P1-201ENST00000446690 SNX2O60749 519 aa9.44□□□□□ -0.9
COL6A4P1-201ENST00000446690 GPC4O75487 556 aa9.44□□□□□ -0.9
COL6A4P1-201ENST00000446690 CIB2O75838 187 aa9.44□□□□□ -0.9
COL6A4P1-201ENST00000446690 TM7SF2O76062 418 aa9.44□□□□□ -0.9
COL6A4P1-201ENST00000446690 POP4O95707 220 aaKnown RBP9.44□□□□□ -0.9
COL6A4P1-201ENST00000446690 HNRNPA1P09651 372 aaKnown RBP eCLIP9.44□□□□□ -0.9
COL6A4P1-201ENST00000446690 THRAP10827 490 aa9.44□□□□□ -0.9
COL6A4P1-201ENST00000446690 POLR2EP19388 210 aaKnown RBP9.44□□□□□ -0.9
COL6A4P1-201ENST00000446690 ITGALP20701 1170 aa9.44□□□□□ -0.9
COL6A4P1-201ENST00000446690 CPOXP36551 454 aa9.44□□□□□ -0.9
COL6A4P1-201ENST00000446690 RECQLP46063 649 aaPredicted RBP9.44□□□□□ -0.9
COL6A4P1-201ENST00000446690 NFKB2Q00653 900 aa9.44□□□□□ -0.9
COL6A4P1-201ENST00000446690 ZNF77Q15935 545 aa9.44□□□□□ -0.9
COL6A4P1-201ENST00000446690 CDKN3Q16667 212 aa9.44□□□□□ -0.9
COL6A4P1-201ENST00000446690 PPP1R3AQ16821 1122 aa9.44□□□□□ -0.9
COL6A4P1-201ENST00000446690 PRSS36Q5K4E3 855 aa9.44□□□□□ -0.9
COL6A4P1-201ENST00000446690 LRRC66Q68CR7 880 aa9.44□□□□□ -0.9
COL6A4P1-201ENST00000446690 TRIM68Q6AZZ1 485 aa9.44□□□□□ -0.9
COL6A4P1-201ENST00000446690 ELMSAN1Q6PJG2 1045 aa9.44□□□□□ -0.9
COL6A4P1-201ENST00000446690 CRTC1Q6UUV9 634 aa9.44□□□□□ -0.9
COL6A4P1-201ENST00000446690 TMC5Q6UXY8 1006 aa9.44□□□□□ -0.9
COL6A4P1-201ENST00000446690 CERS6Q6ZMG9 384 aa9.44□□□□□ -0.9
COL6A4P1-201ENST00000446690 SNX20Q7Z614 316 aa9.44□□□□□ -0.9
COL6A4P1-201ENST00000446690 SNX32Q86XE0 403 aa9.44□□□□□ -0.9
COL6A4P1-201ENST00000446690 DEFB107AQ8IZN7 70 aa9.44□□□□□ -0.9
COL6A4P1-201ENST00000446690 KIRREL3Q8IZU9 778 aa9.44□□□□□ -0.9
COL6A4P1-201ENST00000446690 KCNJ9Q92806 393 aa9.44□□□□□ -0.9
COL6A4P1-201ENST00000446690 FUBP1Q96AE4 644 aaKnown RBP9.44□□□□□ -0.9
COL6A4P1-201ENST00000446690 TRMOQ9BU70 441 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms