RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 TTPAP49638 278 aa17.26■□□□□ 0.35
SGCE-206ENST00000445866 RACK1P63244 317 aaKnown RBP17.26■□□□□ 0.35
SGCE-206ENST00000445866 SEMA3AQ14563 771 aa17.26■□□□□ 0.35
SGCE-206ENST00000445866 DBN1Q16643 649 aa17.26■□□□□ 0.35
SGCE-206ENST00000445866 GPRC6AQ5T6X5 926 aa17.26■□□□□ 0.35
SGCE-206ENST00000445866 Q6ZSR6 202 aa17.26■□□□□ 0.35
SGCE-206ENST00000445866 FUBP1Q96AE4 644 aaKnown RBP17.26■□□□□ 0.35
SGCE-206ENST00000445866 SLC6A18Q96N87 628 aa17.26■□□□□ 0.35
SGCE-206ENST00000445866 COPS8Q99627 209 aa17.26■□□□□ 0.35
SGCE-206ENST00000445866 PRRX2Q99811 253 aa17.26■□□□□ 0.35
SGCE-206ENST00000445866 LGR4Q9BXB1 951 aa17.26■□□□□ 0.35
SGCE-206ENST00000445866 TEX101Q9BY14 249 aa17.26■□□□□ 0.35
SGCE-206ENST00000445866 PHPT1Q9NRX4 125 aaPredicted RBP17.26■□□□□ 0.35
SGCE-206ENST00000445866 ZDHHC3Q9NYG2 299 aa17.26■□□□□ 0.35
SGCE-206ENST00000445866 TMEM98Q9Y2Y6 226 aa17.26■□□□□ 0.35
SGCE-206ENST00000445866 SLCO1B1Q9Y6L6 691 aa17.26■□□□□ 0.35
SGCE-206ENST00000445866 MTX2O75431 263 aa17.25■□□□□ 0.35
SGCE-206ENST00000445866 ASMTLO95671 621 aa17.25■□□□□ 0.35
SGCE-206ENST00000445866 S1PR4O95977 384 aa17.25■□□□□ 0.35
SGCE-206ENST00000445866 ACRV1P26436 265 aa17.25■□□□□ 0.35
SGCE-206ENST00000445866 CDK3Q00526 305 aa17.25■□□□□ 0.35
SGCE-206ENST00000445866 LDLRAP1Q5SW96 308 aa17.25■□□□□ 0.35
SGCE-206ENST00000445866 ZNF648Q5T619 568 aaPredicted RBP17.25■□□□□ 0.35
SGCE-206ENST00000445866 GCNT7Q6ZNI0 430 aa17.25■□□□□ 0.35
SGCE-206ENST00000445866 TRIM74Q86UV6 250 aa17.25■□□□□ 0.35
SGCE-206ENST00000445866 PHYKPLQ8IUZ5 450 aa17.25■□□□□ 0.35
SGCE-206ENST00000445866 MREGQ8N565 214 aa17.25■□□□□ 0.35
SGCE-206ENST00000445866 DCUN1D1Q96GG9 259 aa17.25■□□□□ 0.35
SGCE-206ENST00000445866 FUT8Q9BYC5 575 aa17.25■□□□□ 0.35
SGCE-206ENST00000445866 ACSS3Q9H6R3 686 aa17.25■□□□□ 0.35
SGCE-206ENST00000445866 TRIM39Q9HCM9 518 aa17.25■□□□□ 0.35
SGCE-206ENST00000445866 TM9SF3Q9HD45 589 aa17.25■□□□□ 0.35
SGCE-206ENST00000445866 SMOXQ9NWM0 555 aa17.25■□□□□ 0.35
SGCE-206ENST00000445866 SLC17A6Q9P2U8 582 aa17.25■□□□□ 0.35
SGCE-206ENST00000445866 A6NNZ2 444 aa17.24■□□□□ 0.35
SGCE-206ENST00000445866 CACNB4O00305 520 aaPredicted RBP17.24■□□□□ 0.35
SGCE-206ENST00000445866 C1QAP02745 245 aa17.24■□□□□ 0.35
SGCE-206ENST00000445866 AHSGP02765 367 aa17.24■□□□□ 0.35
SGCE-206ENST00000445866 F7P08709 466 aaPredicted RBP17.24■□□□□ 0.35
SGCE-206ENST00000445866 HOXC4P09017 264 aaPredicted RBP17.24■□□□□ 0.35
SGCE-206ENST00000445866 H2AFXP16104 143 aaPredicted RBP17.24■□□□□ 0.35
SGCE-206ENST00000445866 MSH3P20585 1137 aa17.24■□□□□ 0.35
SGCE-206ENST00000445866 AKT1P31749 480 aa17.24■□□□□ 0.35
SGCE-206ENST00000445866 SLC1A2P43004 574 aa17.24■□□□□ 0.35
SGCE-206ENST00000445866 RABIFP47224 123 aa17.24■□□□□ 0.35
SGCE-206ENST00000445866 PFN3P60673 137 aa17.24■□□□□ 0.35
SGCE-206ENST00000445866 YPEL5P62699 121 aa17.24■□□□□ 0.35
SGCE-206ENST00000445866 STRA8Q7Z7C7 330 aa17.24■□□□□ 0.35
SGCE-206ENST00000445866 ABI3BPQ7Z7G0 1075 aa17.24■□□□□ 0.35
SGCE-206ENST00000445866 LRRC6Q86X45 466 aa17.24■□□□□ 0.35
SGCE-206ENST00000445866 CNTN4Q8IWV2 1026 aa17.24■□□□□ 0.35
SGCE-206ENST00000445866 C2CD4AQ8NCU7 369 aaPredicted RBP17.24■□□□□ 0.35
SGCE-206ENST00000445866 OR13H1Q8NG92 308 aa17.24■□□□□ 0.35
SGCE-206ENST00000445866 C1orf216Q8TAB5 229 aa17.24■□□□□ 0.35
SGCE-206ENST00000445866 KLHDC7BQ96G42 594 aa17.24■□□□□ 0.35
SGCE-206ENST00000445866 FBXO6Q9NRD1 293 aaPredicted RBP17.24■□□□□ 0.35
SGCE-206ENST00000445866 NSMCE4AQ9NXX6 385 aa17.24■□□□□ 0.35
SGCE-206ENST00000445866 VPS18Q9P253 973 aa17.24■□□□□ 0.35
SGCE-206ENST00000445866 TXNDC16Q9P2K2 825 aa17.24■□□□□ 0.35
SGCE-206ENST00000445866 POC1B-GALNT4F8VUJ3 575 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 BCAT2O15382 392 aaPredicted RBP17.23■□□□□ 0.35
SGCE-206ENST00000445866 OR1I1O60431 355 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 HAUS5O94927 633 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 RALBP11234 206 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 OGNP20774 298 aaKnown RBP17.23■□□□□ 0.35
SGCE-206ENST00000445866 CD38P28907 300 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 MPP1Q00013 466 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 TMEM115Q12893 351 aaPredicted RBP17.23■□□□□ 0.35
SGCE-206ENST00000445866 PDE1CQ14123 709 aaPredicted RBP17.23■□□□□ 0.35
SGCE-206ENST00000445866 LPAL2Q16609 132 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 KLHL38Q2WGJ6 581 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 ZC3H14Q6PJT7 736 aaKnown RBP17.23■□□□□ 0.35
SGCE-206ENST00000445866 DOK6Q6PKX4 331 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 KIAA0408Q6ZU52 694 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 MFSD2AQ8NA29 543 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 DDHD1Q8NEL9 900 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 FAM174AQ8TBP5 190 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 HEXDCQ8WVB3 486 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 PIGKQ92643 395 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 COX14Q96I36 57 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 OR2AG1Q9H205 316 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 VPS9D1Q9Y2B5 631 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 CRYL1Q9Y2S2 319 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 PSAT1Q9Y617 370 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 OAS3Q9Y6K5 1087 aaKnown RBP17.23■□□□□ 0.35
SGCE-206ENST00000445866 EXOC1LA0A1B0GW35 172 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 UBA6A0AVT1 1052 aaPredicted RBP17.23■□□□□ 0.35
SGCE-206ENST00000445866 CFAP99D6REC4 459 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 TOR1BO14657 336 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 CDK14O94921 469 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 SHBGP04278 402 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 THEGLP0DJG4 465 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 GNSP15586 552 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 ZNF7P17097 686 aaPredicted RBP17.23■□□□□ 0.35
SGCE-206ENST00000445866 HTR1BP28222 390 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 GABRB3P28472 473 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 MSH2P43246 934 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 LEPRP48357 1165 aaKnown RBP17.23■□□□□ 0.35
SGCE-206ENST00000445866 THOP1P52888 689 aa17.23■□□□□ 0.35
SGCE-206ENST00000445866 EFTUD2Q15029 972 aaKnown RBP eCLIP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms