RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 C16orf70Q9BSU1 422 aa16.54■□□□□ 0.24
TCOF1-206ENST00000445265 RBM4Q9BWF3 364 aaKnown RBP16.54■□□□□ 0.24
TCOF1-206ENST00000445265 IPPKQ9H8X2 491 aa16.54■□□□□ 0.24
TCOF1-206ENST00000445265 LRTM1Q9HBL6 345 aa16.54■□□□□ 0.24
TCOF1-206ENST00000445265 CCDC162PA2VCL2 907 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 ZBTB48P10074 688 aaPredicted RBP16.53■□□□□ 0.24
TCOF1-206ENST00000445265 CDH4P55283 916 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 CACNG1Q06432 222 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 ARMCX4Q5H9R4 360 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 ZNF540Q8NDQ6 660 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 MYO19Q96H55 970 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 PANX1Q96RD7 426 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 CIPCQ9C0C6 399 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 SMOC2Q9H3U7 446 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 AKTIPQ9H8T0 292 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 KLHL3Q9UH77 587 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 PADI4Q9UM07 663 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 CORO2BQ9UQ03 480 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 SYN3O14994 580 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 OR4F21O95013 312 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 TP53BP2Q13625 1128 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 DLK2Q6UY11 383 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 HIPK1Q86Z02 1210 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 PALMDQ9NP74 551 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 SAMD4AQ9UPU9 718 aaKnown RBP16.53■□□□□ 0.24
TCOF1-206ENST00000445265 ELOVL7A1L3X0 281 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 RFTN1Q14699 578 aaPredicted RBP16.53■□□□□ 0.24
TCOF1-206ENST00000445265 RBM20Q5T481 1227 aaKnown RBP16.53■□□□□ 0.24
TCOF1-206ENST00000445265 C2CD4AQ8NCU7 369 aaPredicted RBP16.53■□□□□ 0.24
TCOF1-206ENST00000445265 OR7D4Q8NG98 312 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 CRTAC1Q9NQ79 661 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 RREB1Q92766 1687 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 KRT75O95678 551 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 HDCP19113 662 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 SLC10A7Q0GE19 358 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 NCF4Q15080 339 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 FBXO48Q5FWF7 155 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 SPANXN2Q5MJ10 180 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 ERAP2Q6P179 960 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 AMER2Q8N7J2 671 aa16.53■□□□□ 0.24
TCOF1-206ENST00000445265 SAMHD1Q9Y3Z3 626 aaKnown RBP16.53■□□□□ 0.24
TCOF1-206ENST00000445265 PTGER3P43115 390 aa16.52■□□□□ 0.24
TCOF1-206ENST00000445265 EEFSECP57772 596 aaKnown RBP16.52■□□□□ 0.24
TCOF1-206ENST00000445265 ERVK-8P63133 956 aa16.52■□□□□ 0.24
TCOF1-206ENST00000445265 PITX1P78337 314 aaPredicted RBP16.52■□□□□ 0.24
TCOF1-206ENST00000445265 MERTKQ12866 999 aa16.52■□□□□ 0.24
TCOF1-206ENST00000445265 USP41Q3LFD5 358 aa16.52■□□□□ 0.24
TCOF1-206ENST00000445265 KCNK13Q9HB14 408 aa16.52■□□□□ 0.24
TCOF1-206ENST00000445265 MT-ND1P03886 318 aa16.52■□□□□ 0.24
TCOF1-206ENST00000445265 EDN1P05305 212 aa16.52■□□□□ 0.24
TCOF1-206ENST00000445265 PCSK2P16519 638 aa16.52■□□□□ 0.24
TCOF1-206ENST00000445265 TAF1AQ15573 450 aaPredicted RBP16.52■□□□□ 0.24
TCOF1-206ENST00000445265 TAZQ16635 292 aa16.52■□□□□ 0.24
TCOF1-206ENST00000445265 ARMC3Q5W041 872 aa16.52■□□□□ 0.24
TCOF1-206ENST00000445265 ZCCHC8Q6NZY4 707 aaKnown RBP16.52■□□□□ 0.24
TCOF1-206ENST00000445265 ZNF557Q8N988 423 aaPredicted RBP16.52■□□□□ 0.24
TCOF1-206ENST00000445265 TTPALQ9BTX7 342 aa16.52■□□□□ 0.24
TCOF1-206ENST00000445265 ZFYVE1Q9HBF4 777 aa16.52■□□□□ 0.24
TCOF1-206ENST00000445265 ZNF490Q9ULM2 529 aaPredicted RBP16.52■□□□□ 0.24
TCOF1-206ENST00000445265 TLL2Q9Y6L7 1015 aa16.52■□□□□ 0.24
TCOF1-206ENST00000445265 FAM234BA2RU67 622 aa16.52■□□□□ 0.23
TCOF1-206ENST00000445265 MOXD2PA6NHM9 499 aa16.52■□□□□ 0.23
TCOF1-206ENST00000445265 SCELO95171 688 aa16.52■□□□□ 0.23
TCOF1-206ENST00000445265 NTRK1P04629 796 aa16.52■□□□□ 0.23
TCOF1-206ENST00000445265 CAPN1P07384 714 aa16.52■□□□□ 0.23
TCOF1-206ENST00000445265 PPP2R1BP30154 601 aa16.52■□□□□ 0.23
TCOF1-206ENST00000445265 CCNIQ14094 377 aa16.52■□□□□ 0.23
TCOF1-206ENST00000445265 ZNF846Q147U1 533 aa16.52■□□□□ 0.23
TCOF1-206ENST00000445265 DCBLD1Q8N8Z6 715 aa16.52■□□□□ 0.23
TCOF1-206ENST00000445265 ELMO1Q92556 727 aa16.52■□□□□ 0.23
TCOF1-206ENST00000445265 CENPIQ92674 756 aaPredicted RBP16.52■□□□□ 0.23
TCOF1-206ENST00000445265 CHID1Q9BWS9 393 aa16.52■□□□□ 0.23
TCOF1-206ENST00000445265 EIF2B4Q9UI10 523 aaKnown RBP16.52■□□□□ 0.23
TCOF1-206ENST00000445265 A0A1B0GVM2 712 aa16.52■□□□□ 0.23
TCOF1-206ENST00000445265 TCAF2A6NFQ2 919 aa16.52■□□□□ 0.23
TCOF1-206ENST00000445265 RNASEH1O60930 286 aaKnown RBP16.52■□□□□ 0.23
TCOF1-206ENST00000445265 STK16O75716 305 aa16.52■□□□□ 0.23
TCOF1-206ENST00000445265 PAPSS2O95340 614 aaPredicted RBP16.52■□□□□ 0.23
TCOF1-206ENST00000445265 C1RP00736 705 aa16.52■□□□□ 0.23
TCOF1-206ENST00000445265 IDH2P48735 452 aaKnown RBP16.52■□□□□ 0.23
TCOF1-206ENST00000445265 SCAPQ12770 1279 aa16.52■□□□□ 0.23
TCOF1-206ENST00000445265 MRPL28Q13084 256 aaKnown RBP16.52■□□□□ 0.23
TCOF1-206ENST00000445265 PAGE2BQ5JRK9 111 aa16.52■□□□□ 0.23
TCOF1-206ENST00000445265 REXO5Q96IC2 774 aaKnown RBP16.52■□□□□ 0.23
TCOF1-206ENST00000445265 PRRG3Q9BZD7 231 aa16.52■□□□□ 0.23
TCOF1-206ENST00000445265 CACNA2D2Q9NY47 1150 aa16.52■□□□□ 0.23
TCOF1-206ENST00000445265 OR51F1A6NGY5 319 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 QSOX1O00391 747 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 SLC25A14O95258 325 aaPredicted RBP16.51■□□□□ 0.23
TCOF1-206ENST00000445265 SEC24AO95486 1093 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 PPIBP23284 216 aaKnown RBP16.51■□□□□ 0.23
TCOF1-206ENST00000445265 KLHDC10Q6PID8 442 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 PDPRQ8NCN5 879 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 LRRC58Q96CX6 371 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 ZNF599Q96NL3 588 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 LRRC3Q9BY71 257 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 A6NHS1 94 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 FAM72CH0Y354 149 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 CKBP12277 381 aa16.51■□□□□ 0.23
TCOF1-206ENST00000445265 RPS6KA3P51812 740 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms