RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-216	ENST00000444878	PDE5A	O76074	875 aa		13.58	□□□□□ -0.24
RBM39-216	ENST00000444878	CDK14	O94921	469 aa		13.58	□□□□□ -0.24
RBM39-216	ENST00000444878	SRC	P12931	536 aa		13.58	□□□□□ -0.24
RBM39-216	ENST00000444878	HLA-F	P30511	346 aa		13.58	□□□□□ -0.24
RBM39-216	ENST00000444878	HNF1B	P35680	557 aa		13.58	□□□□□ -0.24
RBM39-216	ENST00000444878	CTSO	P43234	321 aa	Predicted RBP	13.58	□□□□□ -0.24
RBM39-216	ENST00000444878	STK19	P49842	368 aa	Predicted RBP	13.58	□□□□□ -0.24
RBM39-216	ENST00000444878	ERF	P50548	548 aa		13.58	□□□□□ -0.24
RBM39-216	ENST00000444878	SH3BP2	P78314	561 aa		13.58	□□□□□ -0.24
RBM39-216	ENST00000444878	SLC34A1	Q06495	639 aa		13.58	□□□□□ -0.24
RBM39-216	ENST00000444878	TEAD2	Q15562	447 aa		13.58	□□□□□ -0.24
RBM39-216	ENST00000444878	PGM2L1	Q6PCE3	622 aa		13.58	□□□□□ -0.24
RBM39-216	ENST00000444878	C16orf89	Q6UX73	402 aa		13.58	□□□□□ -0.24
RBM39-216	ENST00000444878	PELI3	Q8N2H9	469 aa		13.58	□□□□□ -0.24
RBM39-216	ENST00000444878	EEF1AKMT1	Q8WVE0	214 aa		13.58	□□□□□ -0.24
RBM39-216	ENST00000444878	BAD	Q92934	168 aa		13.58	□□□□□ -0.24
RBM39-216	ENST00000444878	FUBP1	Q96AE4	644 aa	Known RBP	13.58	□□□□□ -0.24
RBM39-216	ENST00000444878	CCDC124	Q96CT7	223 aa	Known RBP	13.58	□□□□□ -0.24
RBM39-216	ENST00000444878	LINGO1	Q96FE5	620 aa		13.58	□□□□□ -0.24
RBM39-216	ENST00000444878	TTC1	Q99614	292 aa		13.58	□□□□□ -0.24
RBM39-216	ENST00000444878	IKZF3	Q9UKT9	509 aa		13.58	□□□□□ -0.24
RBM39-216	ENST00000444878	LZTS1	Q9Y250	596 aa		13.58	□□□□□ -0.24
RBM39-216	ENST00000444878	PCDHB1	Q9Y5F3	818 aa		13.58	□□□□□ -0.24
RBM39-216	ENST00000444878	hCG_2014768	A0A024R1R8	64 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	LRRC14B	A6NHZ5	514 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	GOLGA8CP	A6NN73	597 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	TLL1	O43897	1013 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	BNIP3L	O60238	219 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	CLDN7	O95471	211 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	FGF19	O95750	216 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	RPSA	P08865	295 aa	Known RBP	13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	PTPN2	P17706	415 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	DDX6	P26196	483 aa	Known RBP eCLIP	13.57	□□□□□ -0.24	4e-19	■□□□□ 9.8
RBM39-216	ENST00000444878	EEF1D	P29692	281 aa	Known RBP	13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	BMPR1A	P36894	532 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	FPGS	Q05932	587 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	EML3	Q32P44	896 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	ARHGAP15	Q53QZ3	475 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	ANKS6	Q68DC2	871 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	CHSY3	Q70JA7	882 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	TMEM25	Q86YD3	366 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	CPNE9	Q8IYJ1	553 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	FBXW8	Q8N3Y1	598 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	GIMAP7	Q8NHV1	300 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	TRPC4AP	Q8TEL6	797 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	POF1B	Q8WVV4	589 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	RCN3	Q96D15	328 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	P2RY12	Q9H244	342 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	ASB8	Q9H765	288 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	APPL1	Q9UKG1	709 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	CHD7	Q9P2D1	2997 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	CAPN8	A6NHC0	703 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	IQCF5	A8MTL0	148 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	PPP6C	O00743	305 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	AZIN1	O14977	448 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	GRM6	O15303	877 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	TSPAN12	O95859	305 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	FGF4	P08620	206 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	BMP1	P13497	986 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	ZNF7	P17097	686 aa	Predicted RBP	13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	ITGAL	P20701	1170 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	AP2B1	P63010	937 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	CLC	Q05315	142 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	ART3	Q13508	389 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	PPP1R3A	Q16821	1122 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	SNX20	Q7Z614	316 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	SERPINA9	Q86WD7	417 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	MYLK4	Q86YV6	388 aa	Predicted RBP	13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	DSEL	Q8IZU8	1212 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	C19orf60	Q96EN9	201 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	RSRC1	Q96IZ7	334 aa	Known RBP	13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	LMLN	Q96KR4	655 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	ANKRD27	Q96NW4	1050 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	NSUN5	Q96P11	429 aa	Known RBP	13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	C19orf43	Q9BQ61	176 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	CLPB	Q9H078	707 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	EFCAB1	Q9HAE3	211 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	TLR9	Q9NR96	1032 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	RYDEN	Q9NUL5	291 aa	Known RBP	13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	HECA	Q9UBI9	543 aa	Predicted RBP	13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	SLC25A13	Q9UJS0	675 aa		13.57	□□□□□ -0.24
RBM39-216	ENST00000444878	CXorf51A	A0A1B0GTR3	108 aa		13.56	□□□□□ -0.24
RBM39-216	ENST00000444878	ATP6AP2	A0A1C7CYW4	349 aa		13.56	□□□□□ -0.24
RBM39-216	ENST00000444878	NCF1B	A6NI72	391 aa	Predicted RBP	13.56	□□□□□ -0.24
RBM39-216	ENST00000444878	NCF1C	A8MVU1	366 aa	Predicted RBP	13.56	□□□□□ -0.24
RBM39-216	ENST00000444878		A8MX80	341 aa		13.56	□□□□□ -0.24
RBM39-216	ENST00000444878	NEDD8-MDP1	E9PL57	170 aa		13.56	□□□□□ -0.24
RBM39-216	ENST00000444878	ATP6AP2	O75787	350 aa		13.56	□□□□□ -0.24
RBM39-216	ENST00000444878	SORBS2	O94875	1100 aa	Known RBP	13.56	□□□□□ -0.24
RBM39-216	ENST00000444878	RHO	P08100	348 aa		13.56	□□□□□ -0.24
RBM39-216	ENST00000444878	NCF1	P14598	390 aa	Predicted RBP	13.56	□□□□□ -0.24
RBM39-216	ENST00000444878	ARSA	P15289	507 aa		13.56	□□□□□ -0.24
RBM39-216	ENST00000444878	CALR	P27797	417 aa	Known RBP	13.56	□□□□□ -0.24
RBM39-216	ENST00000444878	VHL	P40337	213 aa		13.56	□□□□□ -0.24
RBM39-216	ENST00000444878	EPHA5	P54756	1037 aa		13.56	□□□□□ -0.24
RBM39-216	ENST00000444878	MTTP	P55157	894 aa		13.56	□□□□□ -0.24
RBM39-216	ENST00000444878	LCP2	Q13094	533 aa		13.56	□□□□□ -0.24
RBM39-216	ENST00000444878	NFATC2	Q13469	925 aa		13.56	□□□□□ -0.24
RBM39-216	ENST00000444878	SQLE	Q14534	574 aa		13.56	□□□□□ -0.24
RBM39-216	ENST00000444878	FUT11	Q495W5	492 aa		13.56	□□□□□ -0.24

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