RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 PISDQ9UG56 409 aa19.89■□□□□ 0.77
LRCH3-208ENST00000443727 REXO2Q9Y3B8 237 aaKnown RBP19.89■□□□□ 0.77
LRCH3-208ENST00000443727 SPO11Q9Y5K1 396 aa19.89■□□□□ 0.77
LRCH3-208ENST00000443727 ARHGEF17Q96PE2 2063 aaPredicted RBP19.88■□□□□ 0.77
LRCH3-208ENST00000443727 COL27A1Q8IZC6 1860 aaPredicted RBP19.88■□□□□ 0.77
LRCH3-208ENST00000443727 BTNL10A8MVZ5 291 aa19.88■□□□□ 0.77
LRCH3-208ENST00000443727 GRID2O43424 1007 aa19.88■□□□□ 0.77
LRCH3-208ENST00000443727 SNX2O60749 519 aa19.88■□□□□ 0.77
LRCH3-208ENST00000443727 HGFP14210 728 aa19.88■□□□□ 0.77
LRCH3-208ENST00000443727 PDPK2PQ6A1A2 396 aa19.88■□□□□ 0.77
LRCH3-208ENST00000443727 PHYKPLQ8IUZ5 450 aa19.88■□□□□ 0.77
LRCH3-208ENST00000443727 TMEM159Q96B96 161 aa19.88■□□□□ 0.77
LRCH3-208ENST00000443727 FCRL3Q96P31 734 aaPredicted RBP19.88■□□□□ 0.77
LRCH3-208ENST00000443727 FCRL5Q96RD9 977 aa19.88■□□□□ 0.77
LRCH3-208ENST00000443727 CMKLR1Q99788 373 aa19.88■□□□□ 0.77
LRCH3-208ENST00000443727 FSD1LQ9BXM9 530 aa19.88■□□□□ 0.77
LRCH3-208ENST00000443727 OSBPL8Q9BZF1 889 aa19.88■□□□□ 0.77
LRCH3-208ENST00000443727 DPH1Q9BZG8 443 aa19.88■□□□□ 0.77
LRCH3-208ENST00000443727 CARD9Q9H257 536 aa19.88■□□□□ 0.77
LRCH3-208ENST00000443727 BPIFA1Q9NP55 256 aa19.88■□□□□ 0.77
LRCH3-208ENST00000443727 KCNK4Q9NYG8 393 aa19.88■□□□□ 0.77
LRCH3-208ENST00000443727 AKAP7Q9P0M2 348 aaPredicted RBP19.88■□□□□ 0.77
LRCH3-208ENST00000443727 ATXN10Q9UBB4 475 aa19.88■□□□□ 0.77
LRCH3-208ENST00000443727 KCNK6Q9Y257 313 aa19.88■□□□□ 0.77
LRCH3-208ENST00000443727 LOXL2Q9Y4K0 774 aa19.88■□□□□ 0.77
LRCH3-208ENST00000443727 LOC285095A0A1B0GVY8 99 aa19.87■□□□□ 0.77
LRCH3-208ENST00000443727 CDRT15L2A8MXV6 281 aa19.87■□□□□ 0.77
LRCH3-208ENST00000443727 PPM1DO15297 605 aa19.87■□□□□ 0.77
LRCH3-208ENST00000443727 NUAK1O60285 661 aa19.87■□□□□ 0.77
LRCH3-208ENST00000443727 STK10O94804 968 aaKnown RBP19.87■□□□□ 0.77
LRCH3-208ENST00000443727 EPOP01588 193 aa19.87■□□□□ 0.77
LRCH3-208ENST00000443727 BPIP17213 487 aa19.87■□□□□ 0.77
LRCH3-208ENST00000443727 RBL1P28749 1068 aa19.87■□□□□ 0.77
LRCH3-208ENST00000443727 CXADRP78310 365 aa19.87■□□□□ 0.77
LRCH3-208ENST00000443727 ZFP36L1Q07352 338 aaKnown RBP19.87■□□□□ 0.77
LRCH3-208ENST00000443727 MPP3Q13368 585 aa19.87■□□□□ 0.77
LRCH3-208ENST00000443727 NOMO1Q15155 1222 aa19.87■□□□□ 0.77
LRCH3-208ENST00000443727 CLPPQ16740 277 aaPredicted RBP19.87■□□□□ 0.77
LRCH3-208ENST00000443727 SIRPB2Q5JXA9 342 aa19.87■□□□□ 0.77
LRCH3-208ENST00000443727 ZNF648Q5T619 568 aaPredicted RBP19.87■□□□□ 0.77
LRCH3-208ENST00000443727 ITPRIPL1Q6GPH6 555 aa19.87■□□□□ 0.77
LRCH3-208ENST00000443727 KDELC1Q6UW63 502 aa19.87■□□□□ 0.77
LRCH3-208ENST00000443727 CDKL3Q8IVW4 592 aaPredicted RBP19.87■□□□□ 0.77
LRCH3-208ENST00000443727 SPC24Q8NBT2 197 aa19.87■□□□□ 0.77
LRCH3-208ENST00000443727 ACTL9Q8TC94 416 aa19.87■□□□□ 0.77
LRCH3-208ENST00000443727 BLOC1S5Q8TDH9 187 aa19.87■□□□□ 0.77
LRCH3-208ENST00000443727 GLYATL1Q969I3 302 aa19.87■□□□□ 0.77
LRCH3-208ENST00000443727 OXNAD1Q96HP4 312 aaPredicted RBP19.87■□□□□ 0.77
LRCH3-208ENST00000443727 SLC38A3Q99624 504 aa19.87■□□□□ 0.77
LRCH3-208ENST00000443727 SEMA6CQ9H3T2 930 aa19.87■□□□□ 0.77
LRCH3-208ENST00000443727 TRABDQ9H4I3 376 aa19.87■□□□□ 0.77
LRCH3-208ENST00000443727 PRORYQ9H606 182 aa19.87■□□□□ 0.77
LRCH3-208ENST00000443727 STN1Q9H668 368 aaKnown RBP19.87■□□□□ 0.77
LRCH3-208ENST00000443727 C10orf88Q9H8K7 445 aa19.87■□□□□ 0.77
LRCH3-208ENST00000443727 TRIM39Q9HCM9 518 aa19.87■□□□□ 0.77
LRCH3-208ENST00000443727 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.87■□□□□ 0.77
LRCH3-208ENST00000443727 NFKBIL1Q9UBC1 381 aaPredicted RBP19.87■□□□□ 0.77
LRCH3-208ENST00000443727 EFR3BQ9Y2G0 817 aa19.87■□□□□ 0.77
LRCH3-208ENST00000443727 PCYT1BQ9Y5K3 369 aaPredicted RBP19.87■□□□□ 0.77
LRCH3-208ENST00000443727 UNC13CQ8NB66 2214 aa19.87■□□□□ 0.77
LRCH3-208ENST00000443727 GOLGA6L6A8MZA4 724 aa19.86■□□□□ 0.77
LRCH3-208ENST00000443727 AURKAO14965 403 aa19.86■□□□□ 0.77
LRCH3-208ENST00000443727 PJA2O43164 708 aa19.86■□□□□ 0.77
LRCH3-208ENST00000443727 TJP3O95049 919 aa19.86■□□□□ 0.77
LRCH3-208ENST00000443727 SLC2A4P14672 509 aa19.86■□□□□ 0.77
LRCH3-208ENST00000443727 ZNF8P17098 575 aaPredicted RBP19.86■□□□□ 0.77
LRCH3-208ENST00000443727 CHRNA4P43681 627 aa19.86■□□□□ 0.77
LRCH3-208ENST00000443727 UCNP55089 124 aa19.86■□□□□ 0.77
LRCH3-208ENST00000443727 EIF3EP60228 445 aaKnown RBP19.86■□□□□ 0.77
LRCH3-208ENST00000443727 OTUD4Q01804 1114 aaKnown RBP19.86■□□□□ 0.77
LRCH3-208ENST00000443727 KIF5AQ12840 1032 aa19.86■□□□□ 0.77
LRCH3-208ENST00000443727 NR1D2Q14995 579 aa19.86■□□□□ 0.77
LRCH3-208ENST00000443727 NKAIN2Q5VXU1 208 aa19.86■□□□□ 0.77
LRCH3-208ENST00000443727 DARS2Q6PI48 645 aaKnown RBP19.86■□□□□ 0.77
LRCH3-208ENST00000443727 PEX26Q7Z412 305 aa19.86■□□□□ 0.77
LRCH3-208ENST00000443727 CLEC14AQ86T13 490 aa19.86■□□□□ 0.77
LRCH3-208ENST00000443727 GDAP1Q8TB36 358 aa19.86■□□□□ 0.77
LRCH3-208ENST00000443727 SLC37A2Q8TED4 501 aa19.86■□□□□ 0.77
LRCH3-208ENST00000443727 AHCYL2Q96HN2 611 aaKnown RBP19.86■□□□□ 0.77
LRCH3-208ENST00000443727 MRGPRX2Q96LB1 330 aa19.86■□□□□ 0.77
LRCH3-208ENST00000443727 PLEKHG4BQ96PX9 1271 aa19.86■□□□□ 0.77
LRCH3-208ENST00000443727 NUDT22Q9BRQ3 303 aa19.86■□□□□ 0.77
LRCH3-208ENST00000443727 OSGEPL1Q9H4B0 414 aa19.86■□□□□ 0.77
LRCH3-208ENST00000443727 HACD3Q9P035 362 aa19.86■□□□□ 0.77
LRCH3-208ENST00000443727 IMPACTQ9P2X3 320 aa19.86■□□□□ 0.77
LRCH3-208ENST00000443727 TBC1D29Q9UFV1 150 aa19.86■□□□□ 0.77
LRCH3-208ENST00000443727 AMFRQ9UKV5 643 aa19.86■□□□□ 0.77
LRCH3-208ENST00000443727 KIF26BQ2KJY2 2108 aa19.85■□□□□ 0.77
LRCH3-208ENST00000443727 GRID2IPA4D2P6 1211 aa19.85■□□□□ 0.77
LRCH3-208ENST00000443727 GPR89AB7ZAQ6 455 aa19.85■□□□□ 0.77
LRCH3-208ENST00000443727 ANXA9O76027 345 aa19.85■□□□□ 0.77
LRCH3-208ENST00000443727 GPR89BP0CG08 455 aa19.85■□□□□ 0.77
LRCH3-208ENST00000443727 HLA-DPA1P20036 260 aa19.85■□□□□ 0.77
LRCH3-208ENST00000443727 CD1CP29017 333 aa19.85■□□□□ 0.77
LRCH3-208ENST00000443727 SLC5A2P31639 672 aa19.85■□□□□ 0.77
LRCH3-208ENST00000443727 PTPN7P35236 360 aa19.85■□□□□ 0.77
LRCH3-208ENST00000443727 HMGCLP35914 325 aa19.85■□□□□ 0.77
LRCH3-208ENST00000443727 TMPRSS3P57727 454 aa19.85■□□□□ 0.77
LRCH3-208ENST00000443727 SLC1A5Q15758 541 aa19.85■□□□□ 0.77
LRCH3-208ENST00000443727 CRTC3Q6UUV7 619 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms