RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 CRTC3Q6UUV7 619 aa20.85■□□□□ 0.93
CDKN3-204ENST00000442975 NAGSQ8N159 534 aa20.85■□□□□ 0.93
CDKN3-204ENST00000442975 ARL14Q8N4G2 192 aa20.85■□□□□ 0.93
CDKN3-204ENST00000442975 TTC30BQ8N4P2 665 aa20.85■□□□□ 0.93
CDKN3-204ENST00000442975 GRAMD1AQ96CP6 724 aa20.85■□□□□ 0.93
CDKN3-204ENST00000442975 SPATA13Q96N96 652 aa20.85■□□□□ 0.93
CDKN3-204ENST00000442975 APOL2Q9BQE5 337 aa20.85■□□□□ 0.93
CDKN3-204ENST00000442975 GORASP1Q9BQQ3 440 aa20.85■□□□□ 0.93
CDKN3-204ENST00000442975 ZMYND15Q9H091 742 aa20.85■□□□□ 0.93
CDKN3-204ENST00000442975 RMI1Q9H9A7 625 aa20.85■□□□□ 0.93
CDKN3-204ENST00000442975 HACD3Q9P035 362 aa20.85■□□□□ 0.93
CDKN3-204ENST00000442975 ATXN10Q9UBB4 475 aa20.85■□□□□ 0.93
CDKN3-204ENST00000442975 LHX6Q9UPM6 363 aa20.85■□□□□ 0.93
CDKN3-204ENST00000442975 KNTC1P50748 2209 aa20.85■□□□□ 0.93
CDKN3-204ENST00000442975 A0A1W2PNU3 283 aaPredicted RBP20.84■□□□□ 0.93
CDKN3-204ENST00000442975 AGRPO00253 132 aa20.84■□□□□ 0.93
CDKN3-204ENST00000442975 ARHGAP6O43182 974 aa20.84■□□□□ 0.93
CDKN3-204ENST00000442975 GRID2O43424 1007 aa20.84■□□□□ 0.93
CDKN3-204ENST00000442975 KRT86O43790 486 aa20.84■□□□□ 0.93
CDKN3-204ENST00000442975 SNX2O60749 519 aa20.84■□□□□ 0.93
CDKN3-204ENST00000442975 AGTP01019 485 aa20.84■□□□□ 0.93
CDKN3-204ENST00000442975 PNLIPP16233 465 aa20.84■□□□□ 0.93
CDKN3-204ENST00000442975 ZNF8P17098 575 aaPredicted RBP20.84■□□□□ 0.93
CDKN3-204ENST00000442975 RBMS1P29558 406 aaKnown RBP20.84■□□□□ 0.93
CDKN3-204ENST00000442975 ALDH4A1P30038 563 aa20.84■□□□□ 0.93
CDKN3-204ENST00000442975 HMGCLP35914 325 aa20.84■□□□□ 0.93
CDKN3-204ENST00000442975 PPM1FP49593 454 aaPredicted RBP20.84■□□□□ 0.93
CDKN3-204ENST00000442975 INHBCP55103 352 aa20.84■□□□□ 0.93
CDKN3-204ENST00000442975 COL28A1Q2UY09 1125 aa20.84■□□□□ 0.93
CDKN3-204ENST00000442975 FAM151BQ6UXP7 276 aa20.84■□□□□ 0.93
CDKN3-204ENST00000442975 C17orf82Q86X59 251 aaPredicted RBP20.84■□□□□ 0.93
CDKN3-204ENST00000442975 LSMEM2Q8N112 164 aa20.84■□□□□ 0.93
CDKN3-204ENST00000442975 RNF10Q8N5U6 811 aaKnown RBP20.84■□□□□ 0.93
CDKN3-204ENST00000442975 TTC13Q8NBP0 860 aa20.84■□□□□ 0.93
CDKN3-204ENST00000442975 CCDC112Q8NEF3 446 aa20.84■□□□□ 0.93
CDKN3-204ENST00000442975 SNIP1Q8TAD8 396 aaKnown RBP20.84■□□□□ 0.93
CDKN3-204ENST00000442975 GDAP1Q8TB36 358 aa20.84■□□□□ 0.93
CDKN3-204ENST00000442975 FGF11Q92914 225 aa20.84■□□□□ 0.93
CDKN3-204ENST00000442975 PLEKHG4BQ96PX9 1271 aa20.84■□□□□ 0.93
CDKN3-204ENST00000442975 STRADBQ9C0K7 418 aa20.84■□□□□ 0.93
CDKN3-204ENST00000442975 CARD9Q9H257 536 aa20.84■□□□□ 0.93
CDKN3-204ENST00000442975 CHD6Q8TD26 2715 aa20.84■□□□□ 0.93
CDKN3-204ENST00000442975 TRBV23OR9-2A0A075B6M9 112 aa20.83■□□□□ 0.93
CDKN3-204ENST00000442975 A0A087WV48 116 aa20.83■□□□□ 0.93
CDKN3-204ENST00000442975 CCDC187A0A096LP49 1063 aa20.83■□□□□ 0.93
CDKN3-204ENST00000442975 RRP8O43159 456 aaKnown RBP20.83■□□□□ 0.93
CDKN3-204ENST00000442975 NUAK1O60285 661 aa20.83■□□□□ 0.93
CDKN3-204ENST00000442975 OR1D5P58170 312 aa20.83■□□□□ 0.93
CDKN3-204ENST00000442975 CCDC173Q0VFZ6 552 aa20.83■□□□□ 0.93
CDKN3-204ENST00000442975 OLIG2Q13516 323 aa20.83■□□□□ 0.93
CDKN3-204ENST00000442975 LRRC69Q6ZNQ3 347 aa20.83■□□□□ 0.93
CDKN3-204ENST00000442975 ARHGEF18Q6ZSZ5 1173 aa20.83■□□□□ 0.93
CDKN3-204ENST00000442975 ADGRG6Q86SQ4 1221 aa20.83■□□□□ 0.93
CDKN3-204ENST00000442975 FAM71DQ8N9W8 422 aa20.83■□□□□ 0.93
CDKN3-204ENST00000442975 WDR36Q8NI36 951 aaKnown RBP20.83■□□□□ 0.93
CDKN3-204ENST00000442975 NAF1Q96HR8 494 aaKnown RBP20.83■□□□□ 0.93
CDKN3-204ENST00000442975 HES6Q96HZ4 224 aa20.83■□□□□ 0.93
CDKN3-204ENST00000442975 OSGEPL1Q9H4B0 414 aa20.83■□□□□ 0.93
CDKN3-204ENST00000442975 RDH14Q9HBH5 336 aa20.83■□□□□ 0.93
CDKN3-204ENST00000442975 THSD1Q9NS62 852 aa20.83■□□□□ 0.93
CDKN3-204ENST00000442975 R3HDM2Q9Y2K5 976 aaKnown RBP20.83■□□□□ 0.93
CDKN3-204ENST00000442975 AAR2Q9Y312 384 aaKnown RBP20.83■□□□□ 0.93
CDKN3-204ENST00000442975 PKP3Q9Y446 797 aa20.83■□□□□ 0.93
CDKN3-204ENST00000442975 ASXL3Q9C0F0 2248 aa20.82■□□□□ 0.92
CDKN3-204ENST00000442975 TCRBV7S2A1N4TA0A589 114 aa20.82■□□□□ 0.92
CDKN3-204ENST00000442975 GPR39O43194 453 aa20.82■□□□□ 0.92
CDKN3-204ENST00000442975 ZNF189O75820 626 aaPredicted RBP20.82■□□□□ 0.92
CDKN3-204ENST00000442975 EML2O95834 649 aa20.82■□□□□ 0.92
CDKN3-204ENST00000442975 SPAM1P38567 509 aa20.82■□□□□ 0.92
CDKN3-204ENST00000442975 EIF2S3P41091 472 aaKnown RBP20.82■□□□□ 0.92
CDKN3-204ENST00000442975 ABCG1P45844 678 aa20.82■□□□□ 0.92
CDKN3-204ENST00000442975 PCBP4P57723 403 aaKnown RBP20.82■□□□□ 0.92
CDKN3-204ENST00000442975 ATP13A5Q4VNC0 1218 aa20.82■□□□□ 0.92
CDKN3-204ENST00000442975 PHF19Q5T6S3 580 aa20.82■□□□□ 0.92
CDKN3-204ENST00000442975 SEL1L2Q5TEA6 688 aa20.82■□□□□ 0.92
CDKN3-204ENST00000442975 ZNF438Q7Z4V0 828 aa20.82■□□□□ 0.92
CDKN3-204ENST00000442975 ZNF761Q86XN6 746 aaPredicted RBP20.82■□□□□ 0.92
CDKN3-204ENST00000442975 SLC37A2Q8TED4 501 aa20.82■□□□□ 0.92
CDKN3-204ENST00000442975 ZNF578Q96N58 590 aaPredicted RBP20.82■□□□□ 0.92
CDKN3-204ENST00000442975 TMEM74Q96NL1 305 aa20.82■□□□□ 0.92
CDKN3-204ENST00000442975 TRIM39Q9HCM9 518 aa20.82■□□□□ 0.92
CDKN3-204ENST00000442975 TBC1D29Q9UFV1 150 aa20.82■□□□□ 0.92
CDKN3-204ENST00000442975 ZFYVE26Q68DK2 2539 aa20.82■□□□□ 0.92
CDKN3-204ENST00000442975 GLYATL1P3A0A0U1RQE8 302 aa20.81■□□□□ 0.92
CDKN3-204ENST00000442975 ZW10O43264 779 aa20.81■□□□□ 0.92
CDKN3-204ENST00000442975 DXOO77932 396 aaKnown RBP20.81■□□□□ 0.92
CDKN3-204ENST00000442975 B4GALNT1Q00973 533 aa20.81■□□□□ 0.92
CDKN3-204ENST00000442975 KLF1Q13351 362 aaPredicted RBP20.81■□□□□ 0.92
CDKN3-204ENST00000442975 GTF2H3Q13889 308 aa20.81■□□□□ 0.92
CDKN3-204ENST00000442975 INSCQ1MX18 579 aa20.81■□□□□ 0.92
CDKN3-204ENST00000442975 KHDC1Q4VXA5 237 aaKnown RBP20.81■□□□□ 0.92
CDKN3-204ENST00000442975 ZDHHC20Q5W0Z9 365 aa20.81■□□□□ 0.92
CDKN3-204ENST00000442975 LIN37Q96GY3 246 aaPredicted RBP20.81■□□□□ 0.92
CDKN3-204ENST00000442975 PPP1R2P1Q96PQ5 205 aa20.81■□□□□ 0.92
CDKN3-204ENST00000442975 IL26Q9NPH9 171 aa20.81■□□□□ 0.92
CDKN3-204ENST00000442975 ASCL3Q9NQ33 180 aa20.81■□□□□ 0.92
CDKN3-204ENST00000442975 LZTFL1Q9NQ48 299 aa20.81■□□□□ 0.92
CDKN3-204ENST00000442975 KLC4Q9NSK0 619 aa20.81■□□□□ 0.92
CDKN3-204ENST00000442975 IL17CQ9P0M4 197 aa20.81■□□□□ 0.92
CDKN3-204ENST00000442975 PCDHGA8Q9Y5G5 932 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms