RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 PPP1R2P1Q96PQ5 205 aa7.71□□□□□ -1.17
CD44-211ENST00000442151 VAT1Q99536 393 aa7.71□□□□□ -1.17
CD44-211ENST00000442151 RIOK2Q9BVS4 552 aaKnown RBP7.71□□□□□ -1.17
CD44-211ENST00000442151 REPIN1Q9BWE0 567 aaKnown RBP7.71□□□□□ -1.17
CD44-211ENST00000442151 GPR63Q9BZJ6 419 aa7.71□□□□□ -1.17
CD44-211ENST00000442151 FOXP3Q9BZS1 431 aa7.71□□□□□ -1.17
CD44-211ENST00000442151 SUDS3Q9H7L9 328 aaPredicted RBP7.71□□□□□ -1.17
CD44-211ENST00000442151 TRIM39Q9HCM9 518 aa7.71□□□□□ -1.17
CD44-211ENST00000442151 SARS2Q9NP81 518 aaKnown RBP7.71□□□□□ -1.17
CD44-211ENST00000442151 SLC39A1Q9NY26 324 aa7.71□□□□□ -1.17
CD44-211ENST00000442151 HACD3Q9P035 362 aa7.71□□□□□ -1.17
CD44-211ENST00000442151 APC2O95996 2303 aa7.71□□□□□ -1.17
CD44-211ENST00000442151 LRRD1A4D1F6 860 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 B8ZZF3 427 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 J3QKU1 62 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 KMOO15229 486 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 GRID2O43424 1007 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 MFSD11O43934 449 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 MTA2O94776 668 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 GYPCP04921 128 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 PDHA1P08559 390 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 LHCGRP22888 699 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 CD1CP29017 333 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 MAZP56270 477 aaKnown RBP7.71□□□□□ -1.18
CD44-211ENST00000442151 DSC2Q02487 901 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 TCEAL1Q15170 157 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 QPCTQ16769 361 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 ZNF569Q5MCW4 686 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 TXNRD3NBQ6F5E7 133 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 B3GNT8Q7Z7M8 397 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 TSPAN33Q86UF1 283 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 NRROSQ86YC3 692 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 RFX6Q8HWS3 928 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 TP53INP2Q8IXH6 220 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 ZNF843Q8N446 348 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 IL22RA1Q8N6P7 574 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 CCL4L1Q8NHW4 92 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 SLC35G2Q8TBE7 412 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 TTC25Q96NG3 672 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 DNAJC7Q99615 494 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 SPATA16Q9BXB7 569 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 ZCCHC2Q9C0B9 1178 aaKnown RBP7.71□□□□□ -1.18
CD44-211ENST00000442151 SLC25A51Q9H1U9 297 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 UCK1Q9HA47 277 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 TMEM98Q9Y2Y6 226 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 HEY1Q9Y5J3 304 aa7.71□□□□□ -1.18
CD44-211ENST00000442151 DSPP15924 2871 aaKnown RBP7.7□□□□□ -1.18
CD44-211ENST00000442151 IGHV1OR21-1A0A087WYE8 117 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 IGHV5-10-1A0A0J9YXX1 117 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 KLHL33A6NCF5 533 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 EFSO43281 561 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 SPOPO43791 374 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 PPFIA2O75334 1257 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 SLC25A14O95258 325 aaPredicted RBP7.7□□□□□ -1.18
CD44-211ENST00000442151 CLDN7O95471 211 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 EPOP01588 193 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 PYGMP11217 842 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 TCF4P15884 667 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 AK4P27144 223 aaPredicted RBP7.7□□□□□ -1.18
CD44-211ENST00000442151 CD86P42081 329 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 POLD2P49005 469 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 PDX1P52945 283 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 DCDC1P59894 354 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 HHEXQ03014 270 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 CDK18Q07002 472 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 TEX44Q53QW1 395 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 SLC9A4Q6AI14 798 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 KLHL35Q6PF15 583 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 IYDQ6PHW0 289 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 MARK2Q7KZI7 788 aaKnown RBP7.7□□□□□ -1.18
CD44-211ENST00000442151 CHST15Q7LFX5 561 aaPredicted RBP7.7□□□□□ -1.18
CD44-211ENST00000442151 TRIM48Q8IWZ4 208 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 RCOR2Q8IZ40 523 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 NAGSQ8N159 534 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 TXLNBQ8N3L3 684 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 TRAM1L1Q8N609 369 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 ARRDC2Q8TBH0 407 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 DTX3LQ8TDB6 740 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 TFB1MQ8WVM0 346 aaKnown RBP7.7□□□□□ -1.18
CD44-211ENST00000442151 TTC9Q92623 222 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 CCDC74BQ96LY2 380 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 ADNPQ9H2P0 1102 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 SEMA6CQ9H3T2 930 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 TSPY26PQ9H489 355 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 NHEJ1Q9H9Q4 299 aaPredicted RBP7.7□□□□□ -1.18
CD44-211ENST00000442151 DTLQ9NZJ0 730 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 NFKBIL1Q9UBC1 381 aaPredicted RBP7.7□□□□□ -1.18
CD44-211ENST00000442151 CD84Q9UIB8 345 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 TRHDEQ9UKU6 1024 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 LOC400499M0QZD8 3231 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 FREM2Q5SZK8 3169 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 ANKRD36A6QL64 1941 aa7.7□□□□□ -1.18
CD44-211ENST00000442151 DMXL2Q8TDJ6 3036 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 A0A0A6YYK5 440 aaPredicted RBP7.69□□□□□ -1.18
CD44-211ENST00000442151 PRAMEF33A0A0G2JMD5 474 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 A0A1W2PNU3 283 aaPredicted RBP7.69□□□□□ -1.18
CD44-211ENST00000442151 HACD1B0YJ81 288 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 AKR1B15C9JRZ8 316 aaPredicted RBP7.69□□□□□ -1.18
CD44-211ENST00000442151 PPM1DO15297 605 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 INPP4BO15327 924 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms