RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 ALOXE3Q9BYJ1 711 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 WDR6Q9NNW5 1121 aaKnown RBP20.18■□□□□ 0.82
SHOX2-203ENST00000441443 VTA1Q9NP79 307 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 INTS7Q9NVH2 962 aaKnown RBP20.18■□□□□ 0.82
SHOX2-203ENST00000441443 ZNF229Q9UJW7 825 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 PDE10AQ9Y233 779 aa20.18■□□□□ 0.82
SHOX2-203ENST00000441443 NRCAMQ92823 1304 aa20.17■□□□□ 0.82
SHOX2-203ENST00000441443 A6NL46 340 aa20.17■□□□□ 0.82
SHOX2-203ENST00000441443 ZBBXA8MT70 800 aa20.17■□□□□ 0.82
SHOX2-203ENST00000441443 UPK1AO00322 258 aa20.17■□□□□ 0.82
SHOX2-203ENST00000441443 CCL22O00626 93 aa20.17■□□□□ 0.82
SHOX2-203ENST00000441443 NADKO95544 446 aaPredicted RBP20.17■□□□□ 0.82
SHOX2-203ENST00000441443 GP2P55259 537 aaKnown RBP20.17■□□□□ 0.82
SHOX2-203ENST00000441443 PPP1R8Q12972 351 aaKnown RBP20.17■□□□□ 0.82
SHOX2-203ENST00000441443 FAM187BQ17R55 369 aa20.17■□□□□ 0.82
SHOX2-203ENST00000441443 CTU2Q2VPK5 515 aaKnown RBP20.17■□□□□ 0.82
SHOX2-203ENST00000441443 RBM48Q5RL73 367 aaKnown RBP20.17■□□□□ 0.82
SHOX2-203ENST00000441443 PHYKPLQ8IUZ5 450 aa20.17■□□□□ 0.82
SHOX2-203ENST00000441443 NFKBIZQ9BYH8 718 aa20.17■□□□□ 0.82
SHOX2-203ENST00000441443 PLEKHA5Q9HAU0 1116 aa20.17■□□□□ 0.82
SHOX2-203ENST00000441443 SDR39U1Q9NRG7 319 aaPredicted RBP20.17■□□□□ 0.82
SHOX2-203ENST00000441443 PIN4Q9Y237 131 aaKnown RBP20.17■□□□□ 0.82
SHOX2-203ENST00000441443 FYNP06241 537 aa20.17■□□□□ 0.82
SHOX2-203ENST00000441443 C6orf141Q5SZD1 244 aa20.17■□□□□ 0.82
SHOX2-203ENST00000441443 BNIPLQ7Z465 357 aa20.17■□□□□ 0.82
SHOX2-203ENST00000441443 GPR142Q7Z601 462 aa20.17■□□□□ 0.82
SHOX2-203ENST00000441443 SCML4Q8N228 414 aa20.17■□□□□ 0.82
SHOX2-203ENST00000441443 CHDHQ8NE62 594 aaPredicted RBP20.17■□□□□ 0.82
SHOX2-203ENST00000441443 EFHD2Q96C19 240 aaPredicted RBP20.17■□□□□ 0.82
SHOX2-203ENST00000441443 VAT1Q99536 393 aa20.17■□□□□ 0.82
SHOX2-203ENST00000441443 TRIM54Q9BYV2 358 aa20.17■□□□□ 0.82
SHOX2-203ENST00000441443 SLC52A3Q9NQ40 469 aa20.17■□□□□ 0.82
SHOX2-203ENST00000441443 CACNG4Q9UBN1 327 aa20.17■□□□□ 0.82
SHOX2-203ENST00000441443 POLG2Q9UHN1 485 aa20.17■□□□□ 0.82
SHOX2-203ENST00000441443 A0A1B0GTL3 188 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 RECQL4O94761 1208 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 MMP3P08254 477 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 MYL3P08590 195 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 FSHRP23945 695 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 PIGAP37287 484 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 HECTD2Q5U5R9 776 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 ISCA2Q86U28 154 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 PTRH1Q86Y79 214 aaKnown RBP20.16■□□□□ 0.82
SHOX2-203ENST00000441443 CRYBG2Q8N1P7 616 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 LEMD2Q8NC56 503 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 OR7A2PQ8NGA2 310 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 PTCD2Q8WV60 388 aaKnown RBP20.16■□□□□ 0.82
SHOX2-203ENST00000441443 DDIT4Q9NX09 232 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 C16orf96A6NNT2 1141 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 FAM47E-STBD1D6RA91 191 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 UMPSP11172 480 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 HOXA11P31270 313 aaPredicted RBP20.16■□□□□ 0.82
SHOX2-203ENST00000441443 SLC13A2Q13183 592 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 MFSD4AQ8N468 514 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 DNAJB3Q8WWF6 145 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 BRI3BPQ8WY22 251 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 GLMNQ92990 594 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 MUL1Q969V5 352 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 PTERQ96BW5 349 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 UBXN10Q96LJ8 280 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 TRMOQ9BU70 441 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 OR12D3Q9UGF7 316 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 AAR2Q9Y312 384 aaKnown RBP20.16■□□□□ 0.82
SHOX2-203ENST00000441443 M0R3G1 203 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 AP3B1O00203 1094 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 AZIN1O14977 448 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 SLC4A1P02730 911 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 LBPP18428 481 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 CDKN2DP55273 166 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 DMPKQ09013 629 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 PCSK7Q16549 785 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 KIAA0408Q6ZU52 694 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 USP50Q70EL3 339 aaPredicted RBP20.16■□□□□ 0.82
SHOX2-203ENST00000441443 LINC01465Q8N7H1 131 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 PTGR2Q8N8N7 351 aaPredicted RBP20.16■□□□□ 0.82
SHOX2-203ENST00000441443 BPIFB1Q8TDL5 484 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 CAPSLQ8WWF8 208 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 HTRA1Q92743 480 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 SYT17Q9BSW7 474 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 RNF39Q9H2S5 420 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 TREX1Q9NSU2 369 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 SNX5Q9Y5X3 404 aa20.16■□□□□ 0.82
SHOX2-203ENST00000441443 YJEFN3A6XGL0 299 aa20.15■□□□□ 0.82
SHOX2-203ENST00000441443 TPD52L2O43399 206 aaKnown RBP20.15■□□□□ 0.82
SHOX2-203ENST00000441443 LRIG2O94898 1065 aa20.15■□□□□ 0.82
SHOX2-203ENST00000441443 PAMP19021 973 aa20.15■□□□□ 0.82
SHOX2-203ENST00000441443 KCNK10P57789 538 aa20.15■□□□□ 0.82
SHOX2-203ENST00000441443 VBP1P61758 197 aa20.15■□□□□ 0.82
SHOX2-203ENST00000441443 GLYATQ6IB77 296 aa20.15■□□□□ 0.82
SHOX2-203ENST00000441443 HDAC2Q92769 488 aaKnown RBP20.15■□□□□ 0.82
SHOX2-203ENST00000441443 CGREF1Q99674 301 aa20.15■□□□□ 0.82
SHOX2-203ENST00000441443 FSD1LQ9BXM9 530 aa20.15■□□□□ 0.82
SHOX2-203ENST00000441443 A0A0G2JMZ2 1700 aa20.15■□□□□ 0.82
SHOX2-203ENST00000441443 A0A1W2PP18 115 aa20.15■□□□□ 0.82
SHOX2-203ENST00000441443 NDUFS2O75306 463 aa20.15■□□□□ 0.82
SHOX2-203ENST00000441443 NR4A2P43354 598 aa20.15■□□□□ 0.82
SHOX2-203ENST00000441443 HERVK_113P63132 956 aa20.15■□□□□ 0.82
SHOX2-203ENST00000441443 CD47Q08722 323 aa20.15■□□□□ 0.82
SHOX2-203ENST00000441443 ADPRMQ3LIE5 342 aa20.15■□□□□ 0.82
SHOX2-203ENST00000441443 AASDHQ4L235 1098 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms