RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 FBXO8Q9NRD0 319 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 MRGBPQ9NV56 204 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 EXD2Q9NVH0 621 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 CMTM6Q9NX76 183 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 IL37Q9NZH6 218 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 PCDHB3Q9Y5E6 796 aa16.72■□□□□ 0.27
PMS1-213ENST00000441310 HTTP42858 3142 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 RNF103O00237 685 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 TIMM44O43615 452 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 PARNO95453 639 aaKnown RBP16.71■□□□□ 0.27
PMS1-213ENST00000441310 UBL4AP11441 157 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 FCGR1AP12314 374 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 CD68P34810 354 aaPredicted RBP16.71■□□□□ 0.27
PMS1-213ENST00000441310 GNG2P59768 71 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 NCS1P62166 190 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 KYAT1Q16773 422 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 SMU1Q2TAY7 513 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 FBXO47Q5MNV8 452 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 C8orf82Q6P1X6 216 aaPredicted RBP16.71■□□□□ 0.27
PMS1-213ENST00000441310 SLC41A1Q8IVJ1 513 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 C8orf59Q8N0T1 100 aaPredicted RBP16.71■□□□□ 0.27
PMS1-213ENST00000441310 BEND7Q8N7W2 519 aaPredicted RBP16.71■□□□□ 0.27
PMS1-213ENST00000441310 NXNL1Q96CM4 212 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 DTLQ9NZJ0 730 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 ACTR3BQ9P1U1 418 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 CRNNQ9UBG3 495 aaPredicted RBP16.71■□□□□ 0.27
PMS1-213ENST00000441310 PDE10AQ9Y233 779 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 CLDN5O00501 218 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 TGFBR1P36897 503 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 PPP5CP53041 499 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 MORN1Q5T089 497 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 TSTD2Q5T7W7 516 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 STEAP3Q658P3 488 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 LCN8Q6JVE9 175 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 ZCCHC8Q6NZY4 707 aaKnown RBP16.71■□□□□ 0.27
PMS1-213ENST00000441310 FKBP9P1Q75LS8 142 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 KCNMB4Q86W47 210 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 FUNDC1Q8IVP5 155 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 SLC2A14Q8TDB8 520 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 DMRTB1Q96MA1 342 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 RNF145Q96MT1 663 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 APOL2Q9BQE5 337 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 INTS10Q9NVR2 710 aaKnown RBP16.71■□□□□ 0.27
PMS1-213ENST00000441310 MAP10Q9P2G4 905 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 SATB2Q9UPW6 733 aa16.71■□□□□ 0.27
PMS1-213ENST00000441310 TIMM13Q9Y5L4 95 aaPredicted RBP16.71■□□□□ 0.27
PMS1-213ENST00000441310 UNCXA6NJT0 531 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 A8MV72 311 aaPredicted RBP16.7■□□□□ 0.26
PMS1-213ENST00000441310 TTC34A8MYJ7 566 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 PGK1P00558 417 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 TSPAN8P19075 237 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 SDC4P31431 198 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 PLK1P53350 603 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 DGCR6Q14129 220 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 ZBTB6Q15916 424 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 COLEC12Q5KU26 742 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 CXCL17Q6UXB2 119 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 STK32CQ86UX6 486 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 TXNDC5Q8NBS9 432 aaKnown RBP16.7■□□□□ 0.26
PMS1-213ENST00000441310 CCNYQ8ND76 341 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 ZFYVE19Q96K21 471 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 BTN2A3PQ96KV6 586 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 SLC30A3Q99726 388 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 ANAPC2Q9UJX6 822 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 ZNF221Q9UK13 617 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 SMIM35A0A1B0GVV1 85 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 H0YAE9 185 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 UPK1BO75841 260 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 FSHRP23945 695 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 GTF2E2P29084 291 aaKnown RBP16.7■□□□□ 0.26
PMS1-213ENST00000441310 EIF2DP41214 584 aaKnown RBP16.7■□□□□ 0.26
PMS1-213ENST00000441310 P2RX3P56373 397 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 TAF2Q6P1X5 1199 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 NEK5Q6P3R8 708 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 SLC22A15Q8IZD6 547 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 FAM83FQ8NEG4 500 aaPredicted RBP16.7■□□□□ 0.26
PMS1-213ENST00000441310 OR13J1Q8NGT2 312 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 KHSRPQ92945 711 aaKnown RBP eCLIP16.7■□□□□ 0.268e-10■■□□□ 12.3
PMS1-213ENST00000441310 DEPDC7Q96QD5 511 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 COQ7Q99807 217 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 ZNF670Q9BS34 389 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 DSN1Q9H410 356 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 SNX2O60749 519 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 FUT11Q495W5 492 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 RBM48Q5RL73 367 aaKnown RBP16.7■□□□□ 0.26
PMS1-213ENST00000441310 CLEC6AQ6EIG7 209 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 CENPLQ8N0S6 344 aaPredicted RBP16.7■□□□□ 0.26
PMS1-213ENST00000441310 CELF2-AS1Q8N7Q2 184 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 PIK3C3Q8NEB9 887 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 FAM149B1Q96BN6 582 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 ZNF560Q96MR9 790 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 TMEM246Q9BRR3 403 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 GIMAP2Q9UG22 337 aa16.7■□□□□ 0.26
PMS1-213ENST00000441310 MBLAC1A4D2B0 266 aaPredicted RBP16.69■□□□□ 0.26
PMS1-213ENST00000441310 TBKBP1A7MCY6 615 aa16.69■□□□□ 0.26
PMS1-213ENST00000441310 SLC35E2BP0CK96 405 aa16.69■□□□□ 0.26
PMS1-213ENST00000441310 PCNAP12004 261 aa16.69■□□□□ 0.26
PMS1-213ENST00000441310 BDNFP23560 247 aa16.69■□□□□ 0.26
PMS1-213ENST00000441310 FKBP1BP68106 108 aa16.69■□□□□ 0.26
PMS1-213ENST00000441310 FSCN1Q16658 493 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 287.5 ms