RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 RAB20Q9NX57 234 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 ZHX1Q9UKY1 873 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 NFU1Q9UMS0 254 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 COQ4Q9Y3A0 265 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 ALG6Q9Y672 507 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 KIF13BQ9NQT8 1826 aa3.56□□□□□ -1.84
HMGB3P11-201ENST00000440127 GOLGA6L10A0A0M3HER8 536 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 GSTTP1A0A1W2PQM5 241 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 DYTNA2CJ06 578 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 A6NLC8 198 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 TMEM110-MUSTN1A8MSY1 372 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 K7ERI5 159 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 CXCL11O14625 94 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 PCDH17O14917 1159 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 CD3EAPO15446 510 aaKnown RBP3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 HOXC11O43248 304 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 KCNAB3O43448 404 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 MTA2O94776 668 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 GGPS1O95749 300 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 FGGP02679 453 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 CYP1A2P05177 515 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 NHLRC4P0CG21 123 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 TGFB3P10600 412 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 CYP11B1P15538 503 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 CREB1P16220 341 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 NPPBP16860 134 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 CAPN2P17655 700 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 BTF3P20290 206 aaKnown RBP3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 ACVR2AP27037 513 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 ACTN2P35609 894 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 ARL2P36404 184 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 HSPA9P38646 679 aaKnown RBP3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 NAMPTP43490 491 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 LIG4P49917 911 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 TUBP50607 506 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 CDR2Q01850 454 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 PRKCEQ02156 737 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 CNTN2Q02246 1040 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 SP4Q02446 784 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 GCNT1Q02742 428 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 PRPF4BQ13523 1007 aaKnown RBP3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 ARHGEF7Q14155 803 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 NEDD9Q14511 834 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 EMC2Q15006 297 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 PSMD6Q15008 389 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 LARS2Q15031 903 aaKnown RBP3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 MAPKAPK3Q16644 382 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 TMTC4Q5T4D3 741 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 RAP1GAP2Q684P5 730 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 FAAH2Q6GMR7 532 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 ACAD10Q6JQN1 1059 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 CRTC1Q6UUV9 634 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 ZDHHC24Q6UX98 284 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 C15orf39Q6ZRI6 1047 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 DCDC5Q6ZRR9 648 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 BCDIN3DQ7Z5W3 292 aaKnown RBP3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 SLC47A2Q86VL8 602 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 ZNF677Q86XU0 584 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 PALB2Q86YC2 1186 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 CD302Q8IX05 232 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 IQCKQ8N0W5 287 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 MREGQ8N565 214 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 C1orf131Q8NDD1 294 aaKnown RBP3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 FAM76AQ8TAV0 307 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 DNAJB14Q8TBM8 379 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 TAS1R2Q8TE23 839 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 TMEM171Q8WVE6 324 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 THAP4Q8WY91 577 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 SHC3Q92529 594 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 SEMA4DQ92854 862 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 ZBTB9Q96C00 473 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 DCPSQ96C86 337 aaKnown RBP3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 LRRC45Q96CN5 670 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 HIC2Q96JB3 615 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 ZNF48Q96MX3 618 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 ZIM3Q96PE6 472 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 FNBP1Q96RU3 617 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 SH3GL2Q99962 352 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 FAM213AQ9BRX8 229 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 KIFC3Q9BVG8 833 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 AP1M1Q9BXS5 423 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 DDX47Q9H0S4 455 aaKnown RBP3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 RAB17Q9H0T7 212 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 PORCNQ9H237 461 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 CARD9Q9H257 536 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 PABPC3Q9H361 631 aaKnown RBP3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 GOLPH3Q9H4A6 298 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 PLEKHA4Q9H4M7 779 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 GBA2Q9HCG7 927 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 HEYLQ9NQ87 328 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 PRDM8Q9NQV8 689 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 PDGFCQ9NRA1 345 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 TAS2R14Q9NYV8 317 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 CLIC5Q9NZA1 410 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 CWC15Q9P013 229 aaKnown RBP3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 NKX1-2Q9UD57 310 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 NOCTQ9UK39 431 aaKnown RBP3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 SLC13A4Q9UKG4 626 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 GTF3C4Q9UKN8 822 aa3.55□□□□□ -1.84
HMGB3P11-201ENST00000440127 COG5Q9UP83 839 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms