RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 GK5Q6ZS86 529 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 FRMD7Q6ZUT3 714 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 MTSS1LQ765P7 747 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 TLK2Q86UE8 772 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 GPSM1Q86YR5 675 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 FBXO16Q8IX29 292 aaPredicted RBP6.35□□□□□ -1.39
BDNF-211ENST00000439476 SPATA6LQ8N4H0 392 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 RTL3Q8N8U3 475 aaKnown RBP6.35□□□□□ -1.39
BDNF-211ENST00000439476 FAM156AQ8NDB6 213 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 OR7A2PQ8NGA2 310 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 PCDH19Q8TAB3 1148 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 SPPL2AQ8TCT8 520 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 SGK3Q96BR1 496 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 METTL2AQ96IZ6 378 aaKnown RBP6.35□□□□□ -1.39
BDNF-211ENST00000439476 CSPG4P5Q96PW8 444 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 C1QTNF7Q9BXJ2 289 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 SPRTNQ9H040 489 aaPredicted RBP6.35□□□□□ -1.39
BDNF-211ENST00000439476 ABHD16BQ9H3Z7 469 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 IFT22Q9H7X7 185 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 SPON1Q9HCB6 807 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 GIN1Q9NXP7 522 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 SNTG2Q9NY99 539 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 SH3BP4Q9P0V3 963 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 CRYL1Q9Y2S2 319 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 GSAPA4D1B5 854 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 POM121CA8CG34 1229 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 ATP6V1G2-DDX39BF2Z307 99 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 SLC22A2O15244 555 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 ZBTB14O43829 449 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 GCATO75600 419 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 ANXA5P08758 320 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 FGFR1P11362 822 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 MTHFD1P11586 935 aaKnown RBP6.35□□□□□ -1.39
BDNF-211ENST00000439476 RPS7P62081 194 aaKnown RBP6.35□□□□□ -1.39
BDNF-211ENST00000439476 PRKG2Q13237 762 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 DDX39BQ13838 428 aaKnown RBP6.35□□□□□ -1.39
BDNF-211ENST00000439476 SPIDRQ14159 915 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 KCNJ11Q14654 390 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 INTS6LQ5JSJ4 861 aaKnown RBP6.35□□□□□ -1.39
BDNF-211ENST00000439476 ALG1LQ6GMV1 187 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 CDHR3Q6ZTQ4 885 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 TICAM1Q8IUC6 712 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 GALNT13Q8IUC8 556 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 REM2Q8IYK8 340 aaPredicted RBP6.35□□□□□ -1.39
BDNF-211ENST00000439476 TBC1D21Q8IYX1 336 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 CARNMT1Q8N4J0 409 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 LRRC52Q8N7C0 313 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 CRYGNQ8WXF5 182 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 LPGAT1Q92604 370 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 MYLPFQ96A32 169 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 RBM18Q96H35 190 aaKnown RBP6.35□□□□□ -1.39
BDNF-211ENST00000439476 PIP5K1AQ99755 562 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 NUAK2Q9H093 628 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 SPATC1LQ9H0A9 340 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 TLE6Q9H808 572 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 VPS45Q9NRW7 570 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 ZNF358Q9NW07 568 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 MAGEL2Q9UJ55 1249 aa6.35□□□□□ -1.39
BDNF-211ENST00000439476 C2CD4BA6NLJ0 364 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 WWP2O00308 870 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 SSX5O60225 188 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 CILPO75339 1184 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 AGR2O95994 175 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 GJB1P08034 283 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 HPGDP15428 266 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 YBX3P16989 372 aaKnown RBP eCLIP6.34□□□□□ -1.39
BDNF-211ENST00000439476 YWHAQP27348 245 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 SEPHS1P49903 392 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 CREMQ03060 361 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 ZNF846Q147U1 533 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 PXDC1Q5TGL8 231 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 ZNF549Q6P9A3 640 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 AFTPHQ6ULP2 937 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 LCLAT1Q6UWP7 414 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 UTS2BQ765I0 119 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 AHI1Q8N157 1196 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 MPP5Q8N3R9 675 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 B3GALNT2Q8NCR0 500 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 FIG4Q92562 907 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 EDEM1Q92611 657 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 MOGAT1Q96PD6 335 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 ACOX2Q99424 681 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 MTG1Q9BT17 334 aaPredicted RBP6.34□□□□□ -1.39
BDNF-211ENST00000439476 ADARB2Q9NS39 739 aaKnown RBP6.34□□□□□ -1.39
BDNF-211ENST00000439476 SETD4Q9NVD3 440 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 SIRPGQ9P1W8 387 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 SLC17A6Q9P2U8 582 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 TRPS1Q9UHF7 1281 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 RAPGEFL1Q9UHV5 662 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 INVSQ9Y283 1065 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 RIPK3Q9Y572 518 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 PCDHGB3Q9Y5G1 929 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 NUP98P52948 1817 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 PHLPP1O60346 1717 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 ATRNL1Q5VV63 1379 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 DHRS12A0PJE2 317 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 NCF1BA6NI72 391 aaPredicted RBP6.34□□□□□ -1.39
BDNF-211ENST00000439476 YDJCA8MPS7 323 aa6.34□□□□□ -1.39
BDNF-211ENST00000439476 NCF1CA8MVU1 366 aaPredicted RBP6.34□□□□□ -1.39
BDNF-211ENST00000439476 KCNU1A8MYU2 1149 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms