RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 SNX5Q9Y5X3 404 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 GMEB1Q9Y692 573 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 ACOT8O14734 319 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 STAU1O95793 577 aaKnown RBP9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 EFNA1P20827 205 aaPredicted RBP9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 FMO3P31513 532 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 ACVRL1P37023 503 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 MAGEA3P43357 314 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 MAP2K4P45985 399 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 TWF1Q12792 350 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 UBE2UQ5VVX9 321 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 TBPL2Q6SJ96 375 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 ABRAXAS1Q6UWZ7 409 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 LINGO4Q6UY18 593 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 Q6ZNX1 250 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 PAGE2Q7Z2X7 111 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 GALNT10Q86SR1 603 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 OR13C4Q8NGS5 318 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 ASB9Q96DX5 294 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 NPLQ9BXD5 320 aaPredicted RBP9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 MRGBPQ9NV56 204 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 GIN1Q9NXP7 522 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 AFF4Q9UHB7 1163 aaKnown RBP9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 MID2Q9UJV3 735 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 GPC6Q9Y625 555 aaPredicted RBP9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 ARL5AQ9Y689 179 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 DOCK1Q14185 1865 aa9.89□□□□□ -0.83
CDC42SE1-202ENST00000439374 MOXD2PA6NHM9 499 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 NME4O00746 187 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 CHRM5P08912 532 aaPredicted RBP9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 SLC35E2BP0CK96 405 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 HSMCR30P0CW71 290 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 DBTP11182 482 aaKnown RBP9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 DUSP4Q13115 394 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 COL9A2Q14055 689 aaPredicted RBP9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 INAQ16352 499 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 SYT16Q17RD7 645 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 SAMD4BQ5PRF9 694 aaKnown RBP9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 DCLRE1AQ6PJP8 1040 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 MICU2Q8IYU8 434 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 LSMEM2Q8N112 164 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 AFAP1L2Q8N4X5 818 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 RDH11Q8TC12 318 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 SH3RF2Q8TEC5 729 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 ZFP90Q8TF47 636 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 GTF3C2Q8WUA4 911 aaPredicted RBP9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 THUMPD3Q9BV44 507 aaKnown RBP9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 LHPPQ9H008 270 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 UNC93B1Q9H1C4 597 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 OSBPL2Q9H1P3 480 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 HIPK3Q9H422 1215 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 CASS4Q9NQ75 786 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 MOSPD1Q9UJG1 213 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 PCDHGA3Q9Y5H0 932 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 A0A1W2PQ67 120 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 TAF4O00268 1085 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 RHOBTB1O94844 696 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 INMTO95050 263 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 FADS2O95864 444 aaKnown RBP9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 MYL4P12829 197 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 ALOX12P18054 663 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 GTF2E2P29084 291 aaKnown RBP9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 IDUAP35475 653 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 SERPINH1P50454 418 aaKnown RBP9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 ARSDP51689 593 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 ATN1P54259 1190 aaPredicted RBP9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 SULT2A1Q06520 285 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 TAF10Q12962 218 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 NFATC3Q12968 1075 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 SPCS2Q15005 226 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 ANKRD26P1Q6NSI1 321 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 TMEM135Q86UB9 458 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 ITIH5Q86UX2 942 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 SLC22A16Q86VW1 577 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 POC5Q8NA72 575 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 OR7D4Q8NG98 312 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 GFM2Q969S9 779 aaKnown RBP9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 CEP44Q9C0F1 390 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 EHD1Q9H4M9 534 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 DUS2Q9NX74 493 aaKnown RBP9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 COQ3Q9NZJ6 369 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 MARCH2Q9P0N8 246 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 BAG5Q9UL15 447 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 CAB39Q9Y376 341 aaPredicted RBP9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 TRAF6Q9Y4K3 522 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 SNX8Q9Y5X2 465 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 HS3ST4Q9Y661 456 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 FER1L6Q2WGJ9 1857 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 PIP5K1BO14986 540 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 CNOT3O75175 753 aaKnown RBP9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 KRT75O95678 551 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 LDLRP01130 860 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 DNAJB2P25686 324 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 SERPINB1P30740 379 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 RPS9P46781 194 aaKnown RBP9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 CRHR2Q13324 411 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 ZRANB3Q5FWF4 1079 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 R3HCC1LQ7Z5L2 792 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms