RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 CLASP2O75122 1294 aaKnown RBP16.3■□□□□ 0.2
CLCNKA-203ENST00000439316 GJB3O75712 270 aa16.3■□□□□ 0.2
CLCNKA-203ENST00000439316 GPIP06744 558 aa16.3■□□□□ 0.2
CLCNKA-203ENST00000439316 GNAO1P09471 354 aa16.3■□□□□ 0.2
CLCNKA-203ENST00000439316 PRR35P0CG20 571 aa16.3■□□□□ 0.2
CLCNKA-203ENST00000439316 C7P10643 843 aa16.3■□□□□ 0.2
CLCNKA-203ENST00000439316 CHRM3P20309 590 aa16.3■□□□□ 0.2
CLCNKA-203ENST00000439316 OXTRP30559 389 aa16.3■□□□□ 0.2
CLCNKA-203ENST00000439316 ETFBP38117 255 aa16.3■□□□□ 0.2
CLCNKA-203ENST00000439316 CCT8P50990 548 aa16.3■□□□□ 0.2
CLCNKA-203ENST00000439316 STC1P52823 247 aa16.3■□□□□ 0.2
CLCNKA-203ENST00000439316 YBX1P67809 324 aaKnown RBP16.3■□□□□ 0.2
CLCNKA-203ENST00000439316 DSC1Q08554 894 aa16.3■□□□□ 0.2
CLCNKA-203ENST00000439316 PTPRCAPQ14761 206 aa16.3■□□□□ 0.2
CLCNKA-203ENST00000439316 C1orf53Q5VUE5 145 aa16.3■□□□□ 0.2
CLCNKA-203ENST00000439316 SPRED1Q7Z699 444 aa16.3■□□□□ 0.2
CLCNKA-203ENST00000439316 DEFB128Q7Z7B8 93 aa16.3■□□□□ 0.2
CLCNKA-203ENST00000439316 DCP1BQ8IZD4 617 aaKnown RBP16.3■□□□□ 0.2
CLCNKA-203ENST00000439316 BLOC1S5Q8TDH9 187 aa16.3■□□□□ 0.2
CLCNKA-203ENST00000439316 ADAMTS16Q8TE57 1224 aa16.3■□□□□ 0.2
CLCNKA-203ENST00000439316 KIAA1191Q96A73 305 aa16.3■□□□□ 0.2
CLCNKA-203ENST00000439316 TMEM125Q96AQ2 219 aa16.3■□□□□ 0.2
CLCNKA-203ENST00000439316 SEMA3CQ99985 751 aa16.3■□□□□ 0.2
CLCNKA-203ENST00000439316 C8orf4Q9NR00 106 aa16.3■□□□□ 0.2
CLCNKA-203ENST00000439316 CATSPERZQ9NTU4 200 aa16.3■□□□□ 0.2
CLCNKA-203ENST00000439316 ABI2Q9NYB9 513 aaPredicted RBP16.3■□□□□ 0.2
CLCNKA-203ENST00000439316 BTRCQ9Y297 605 aa16.3■□□□□ 0.2
CLCNKA-203ENST00000439316 GPR45Q9Y5Y3 372 aa16.3■□□□□ 0.2
CLCNKA-203ENST00000439316 FAM149AA5PLN7 773 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 RPS17P08708 135 aaKnown RBP16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 LINC00032P0C843 101 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 GFAPP14136 432 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 PBX3P40426 434 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 GATMP50440 423 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 CLCQ05315 142 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 MERTKQ12866 999 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 SERINC3Q13530 473 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 BTG3Q14201 252 aaPredicted RBP16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 PARP15Q460N3 678 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 SLC36A3Q495N2 470 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 SDHAF4Q5VUM1 108 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 FBXL22Q6P050 247 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 DHRS4L2Q6PKH6 230 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 EGFL6Q8IUX8 553 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 COLGALT2Q8IYK4 626 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 CMTR2Q8IYT2 770 aaKnown RBP16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 ABI1Q8IZP0 508 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 ATP6V0D2Q8N8Y2 350 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 OR13C4Q8NGS5 318 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 RNF217Q8TC41 542 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 PAWRQ96IZ0 340 aaKnown RBP16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 DERL2Q9GZP9 239 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 POLR1EQ9GZS1 481 aaKnown RBP16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 ELAC1Q9H777 363 aaKnown RBP16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 GMIPQ9P107 970 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 MICAL3Q7RTP6 2002 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 A0A1B0GTL3 188 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 DRGXA6NNA5 263 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 ACOX3O15254 700 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 RAMP2O60895 175 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 RASAL1O95294 804 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 EPOP01588 193 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 CXCL10P02778 98 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 FCGR1AP12314 374 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 EEF1DP29692 281 aaKnown RBP16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 RANBP1P43487 201 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 GPR15P49685 360 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 POLD3Q15054 466 aaPredicted RBP16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 TTC33Q6PID6 262 aaPredicted RBP16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 SPATA19Q7Z5L4 167 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 PTRH1Q86Y79 214 aaKnown RBP16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 TRPV3Q8NET8 790 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 OR4L1Q8NH43 312 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 BRSK1Q8TDC3 778 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 BTN2A3PQ96KV6 586 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 FBXO44Q9H4M3 255 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 INTS10Q9NVR2 710 aaKnown RBP16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 TBX21Q9UL17 535 aa16.29■□□□□ 0.2
CLCNKA-203ENST00000439316 A0A0J9YVX5 310 aa16.28■□□□□ 0.2
CLCNKA-203ENST00000439316 A0A1W2PP18 115 aa16.28■□□□□ 0.2
CLCNKA-203ENST00000439316 TCRBV5S2A0A599 114 aa16.28■□□□□ 0.2
CLCNKA-203ENST00000439316 ASPDHA6ND91 283 aa16.28■□□□□ 0.2
CLCNKA-203ENST00000439316 SUPT3HB4E1H0 165 aa16.28■□□□□ 0.2
CLCNKA-203ENST00000439316 ZNF701M0R085 212 aaPredicted RBP16.28■□□□□ 0.2
CLCNKA-203ENST00000439316 MUSKO15146 869 aa16.28■□□□□ 0.2
CLCNKA-203ENST00000439316 SUPT3HO75486 399 aa16.28■□□□□ 0.2
CLCNKA-203ENST00000439316 RPL10P27635 214 aaKnown RBP16.28■□□□□ 0.2
CLCNKA-203ENST00000439316 OR1G1P47890 313 aa16.28■□□□□ 0.2
CLCNKA-203ENST00000439316 ZFP36L2P47974 494 aaKnown RBP16.28■□□□□ 0.2
CLCNKA-203ENST00000439316 GSK3BP49841 420 aa16.28■□□□□ 0.2
CLCNKA-203ENST00000439316 EFEMP1Q12805 493 aa16.28■□□□□ 0.2
CLCNKA-203ENST00000439316 GRIK2Q13002 908 aa16.28■□□□□ 0.2
CLCNKA-203ENST00000439316 RCAN2Q14206 197 aa16.28■□□□□ 0.2
CLCNKA-203ENST00000439316 GALNT3Q14435 633 aa16.28■□□□□ 0.2
CLCNKA-203ENST00000439316 RPS6KA2Q15349 733 aa16.28■□□□□ 0.2
CLCNKA-203ENST00000439316 TMTC4Q5T4D3 741 aa16.28■□□□□ 0.2
CLCNKA-203ENST00000439316 RAP1GAP2Q684P5 730 aa16.28■□□□□ 0.2
CLCNKA-203ENST00000439316 GPR141Q7Z602 305 aa16.28■□□□□ 0.2
CLCNKA-203ENST00000439316 ZNF786Q8N393 782 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms