RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 SLC10A2Q12908 348 aaPredicted RBP9.17□□□□□ -0.94
AC011228.1-201ENST00000439027 PAFAH1B3Q15102 231 aaKnown RBP9.17□□□□□ -0.94
AC011228.1-201ENST00000439027 TGIF1Q15583 401 aa9.17□□□□□ -0.94
AC011228.1-201ENST00000439027 CCNG2Q16589 344 aa9.17□□□□□ -0.94
AC011228.1-201ENST00000439027 CERCAMQ5T4B2 595 aa9.17□□□□□ -0.94
AC011228.1-201ENST00000439027 NCBP2-AS2Q69YL0 99 aa9.17□□□□□ -0.94
AC011228.1-201ENST00000439027 OGFOD3Q6PK18 319 aa9.17□□□□□ -0.94
AC011228.1-201ENST00000439027 PELI3Q8N2H9 469 aa9.17□□□□□ -0.94
AC011228.1-201ENST00000439027 BBS5Q8N3I7 341 aa9.17□□□□□ -0.94
AC011228.1-201ENST00000439027 ATPAF2Q8N5M1 289 aa9.17□□□□□ -0.94
AC011228.1-201ENST00000439027 ACTL9Q8TC94 416 aa9.17□□□□□ -0.94
AC011228.1-201ENST00000439027 TTC9Q92623 222 aa9.17□□□□□ -0.94
AC011228.1-201ENST00000439027 P3H4Q92791 437 aa9.17□□□□□ -0.94
AC011228.1-201ENST00000439027 NUS1Q96E22 293 aa9.17□□□□□ -0.94
AC011228.1-201ENST00000439027 COQ10AQ96MF6 247 aa9.17□□□□□ -0.94
AC011228.1-201ENST00000439027 NSMCE3Q96MG7 304 aa9.17□□□□□ -0.94
AC011228.1-201ENST00000439027 ZNF599Q96NL3 588 aa9.17□□□□□ -0.94
AC011228.1-201ENST00000439027 KRT12Q99456 494 aa9.17□□□□□ -0.94
AC011228.1-201ENST00000439027 SEMA4CQ9C0C4 833 aa9.17□□□□□ -0.94
AC011228.1-201ENST00000439027 NOD2Q9HC29 1040 aa9.17□□□□□ -0.94
AC011228.1-201ENST00000439027 APPL1Q9UKG1 709 aa9.17□□□□□ -0.94
AC011228.1-201ENST00000439027 PCDHGA7Q9Y5G6 932 aa9.17□□□□□ -0.94
AC011228.1-201ENST00000439027 ANKRD36A6QL64 1941 aa9.17□□□□□ -0.94
AC011228.1-201ENST00000439027 HECTD1Q9ULT8 2610 aa9.17□□□□□ -0.94
AC011228.1-201ENST00000439027 A0A1W2PQ67 120 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 PRSS38A1L453 326 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 RHPN2P1A8MT19 583 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 H7C0C1 242 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 J3QKU1 62 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 MFSD11O43934 449 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 PHF2O75151 1096 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 SOCS5O75159 536 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 HEXIM1O94992 359 aaKnown RBP9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 CYP2A6P11509 494 aaPredicted RBP9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 MYCLP1P12525 358 aaPredicted RBP9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 CTPS1P17812 591 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 GM2AP17900 193 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 ITIH1P19827 911 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 ALDH4A1P30038 563 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 CCKBRP32239 447 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 SERPINB6P35237 376 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 COILP38432 576 aaPredicted RBP9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 ETV3P41162 512 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 GNPDA1P46926 289 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 ATP5OP48047 213 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 KCNJ1P48048 391 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 NR2C2P49116 596 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 PPM1FP49593 454 aaPredicted RBP9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 MAZP56270 477 aaKnown RBP9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 OR1D5P58170 312 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 EIF3EP60228 445 aaKnown RBP9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 MAXP61244 160 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 ITKQ08881 620 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 ILF3Q12906 894 aaKnown RBP eCLIP9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 HLTFQ14527 1009 aaKnown RBP eCLIP9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 NOMO1Q15155 1222 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 CNGA3Q16281 694 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 CYP1B1Q16678 543 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 MAP9Q49MG5 647 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 RAET1GQ6H3X3 334 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 TTC27Q6P3X3 843 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 CCDC137Q6PK04 289 aaKnown RBP9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 DOK6Q6PKX4 331 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 USP53Q70EK8 1073 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 B4GALNT4Q76KP1 1039 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 HSD11B1LQ7Z5J1 315 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 SPRED1Q7Z699 444 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 ZC3H18Q86VM9 953 aaKnown RBP9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 HEATR4Q86WZ0 1026 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 MMGT1Q8N4V1 131 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 NOA1Q8NC60 698 aaKnown RBP9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 ZDHHC1Q8WTX9 485 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 SNRNP27Q8WVK2 155 aaKnown RBP9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 USP7Q93009 1102 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 NUDCD1Q96RS6 583 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 GSDMCQ9BYG8 508 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 FRMD8P1Q9BZ68 369 aaPredicted RBP9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 DDX47Q9H0S4 455 aaKnown RBP9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 HOMER3Q9NSC5 361 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 SPATS2LQ9NUQ6 558 aaKnown RBP9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 DTLQ9NZJ0 730 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 AKAP7Q9P0M2 348 aaPredicted RBP9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 DNPEPQ9ULA0 475 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 PHTF1Q9UMS5 762 aa9.16□□□□□ -0.94
AC011228.1-201ENST00000439027 COL27A1Q8IZC6 1860 aaPredicted RBP9.15□□□□□ -0.94
AC011228.1-201ENST00000439027 NVLO15381 856 aaKnown RBP9.15□□□□□ -0.94
AC011228.1-201ENST00000439027 ZW10O43264 779 aa9.15□□□□□ -0.94
AC011228.1-201ENST00000439027 HTRA2O43464 458 aaPredicted RBP9.15□□□□□ -0.94
AC011228.1-201ENST00000439027 LIASO43766 372 aa9.15□□□□□ -0.94
AC011228.1-201ENST00000439027 NUDT21O43809 227 aaKnown RBP9.15□□□□□ -0.94
AC011228.1-201ENST00000439027 CEACAM5P06731 702 aa9.15□□□□□ -0.94
AC011228.1-201ENST00000439027 RBP3P10745 1247 aa9.15□□□□□ -0.94
AC011228.1-201ENST00000439027 CCNB1P14635 433 aa9.15□□□□□ -0.94
AC011228.1-201ENST00000439027 PNLIPP16233 465 aa9.15□□□□□ -0.94
AC011228.1-201ENST00000439027 AK4P27144 223 aaPredicted RBP9.15□□□□□ -0.94
AC011228.1-201ENST00000439027 ETV5P41161 510 aa9.15□□□□□ -0.94
AC011228.1-201ENST00000439027 MMP13P45452 471 aa9.15□□□□□ -0.94
AC011228.1-201ENST00000439027 GPR1P46091 355 aa9.15□□□□□ -0.94
AC011228.1-201ENST00000439027 POLD2P49005 469 aa9.15□□□□□ -0.94
AC011228.1-201ENST00000439027 MRPS25P82663 173 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms