RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.96□□□□□ -0.17
LINC01088-201ENST00000437737 MAMDC2Q7Z304 686 aaPredicted RBP13.96□□□□□ -0.17
LINC01088-201ENST00000437737 HSD11B1LQ7Z5J1 315 aa13.96□□□□□ -0.17
LINC01088-201ENST00000437737 GALNT13Q8IUC8 556 aa13.96□□□□□ -0.17
LINC01088-201ENST00000437737 GALNT6Q8NCL4 622 aa13.96□□□□□ -0.17
LINC01088-201ENST00000437737 FNIP1Q8TF40 1166 aa13.96□□□□□ -0.17
LINC01088-201ENST00000437737 PCDHB18PQ96TA0 734 aa13.96□□□□□ -0.17
LINC01088-201ENST00000437737 SLC39A8Q9C0K1 460 aa13.96□□□□□ -0.17
LINC01088-201ENST00000437737 TRMT1Q9NXH9 659 aaKnown RBP13.96□□□□□ -0.17
LINC01088-201ENST00000437737 KCND3Q9UK17 655 aa13.96□□□□□ -0.17
LINC01088-201ENST00000437737 NENFQ9UMX5 172 aa13.96□□□□□ -0.17
LINC01088-201ENST00000437737 SRPK3Q9UPE1 567 aa13.96□□□□□ -0.17
LINC01088-201ENST00000437737 A0A0A6YYK5 440 aaPredicted RBP13.95□□□□□ -0.18
LINC01088-201ENST00000437737 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.95□□□□□ -0.18
LINC01088-201ENST00000437737 PIPSLA2A3N6 862 aa13.95□□□□□ -0.18
LINC01088-201ENST00000437737 KIF2AO00139 706 aaPredicted RBP13.95□□□□□ -0.18
LINC01088-201ENST00000437737 ZNF500O60304 480 aaPredicted RBP13.95□□□□□ -0.18
LINC01088-201ENST00000437737 CALB1P05937 261 aa13.95□□□□□ -0.18
LINC01088-201ENST00000437737 ZNF28P17035 718 aa13.95□□□□□ -0.18
LINC01088-201ENST00000437737 DCTP40126 519 aa13.95□□□□□ -0.18
LINC01088-201ENST00000437737 LRP8Q14114 963 aa13.95□□□□□ -0.18
LINC01088-201ENST00000437737 NADK2Q4G0N4 442 aa13.95□□□□□ -0.18
LINC01088-201ENST00000437737 PYCR3Q53H96 274 aa13.95□□□□□ -0.18
LINC01088-201ENST00000437737 Q6ZVL8 140 aa13.95□□□□□ -0.18
LINC01088-201ENST00000437737 SLC9B2Q86UD5 537 aa13.95□□□□□ -0.18
LINC01088-201ENST00000437737 TRIM74Q86UV6 250 aa13.95□□□□□ -0.18
LINC01088-201ENST00000437737 PHF13Q86YI8 300 aaPredicted RBP13.95□□□□□ -0.18
LINC01088-201ENST00000437737 RASGRP3Q8IV61 690 aa13.95□□□□□ -0.18
LINC01088-201ENST00000437737 RHOT2Q8IXI1 618 aa13.95□□□□□ -0.18
LINC01088-201ENST00000437737 RNF10Q8N5U6 811 aaKnown RBP13.95□□□□□ -0.18
LINC01088-201ENST00000437737 LZTR1Q8N653 840 aa13.95□□□□□ -0.18
LINC01088-201ENST00000437737 UBE2Q2Q8WVN8 375 aa13.95□□□□□ -0.18
LINC01088-201ENST00000437737 SH3KBP1Q96B97 665 aa13.95□□□□□ -0.18
LINC01088-201ENST00000437737 SARS2Q9NP81 518 aaKnown RBP13.95□□□□□ -0.18
LINC01088-201ENST00000437737 SIDT1Q9NXL6 827 aaKnown RBP13.95□□□□□ -0.18
LINC01088-201ENST00000437737 RCOR3Q9P2K3 495 aaPredicted RBP13.95□□□□□ -0.18
LINC01088-201ENST00000437737 MYO1AQ9UBC5 1043 aa13.95□□□□□ -0.18
LINC01088-201ENST00000437737 REXO2Q9Y3B8 237 aaKnown RBP13.95□□□□□ -0.18
LINC01088-201ENST00000437737 MAP4K5Q9Y4K4 846 aa13.95□□□□□ -0.18
LINC01088-201ENST00000437737 A0A1W2PQ67 120 aa13.94□□□□□ -0.18
LINC01088-201ENST00000437737 TTC24A2A3L6 582 aaPredicted RBP13.94□□□□□ -0.18
LINC01088-201ENST00000437737 A6NCN8 305 aa13.94□□□□□ -0.18
LINC01088-201ENST00000437737 TMCO5BA8MYB1 307 aa13.94□□□□□ -0.18
LINC01088-201ENST00000437737 PSMD11O00231 422 aa13.94□□□□□ -0.18
LINC01088-201ENST00000437737 DFFAO00273 331 aa13.94□□□□□ -0.18
LINC01088-201ENST00000437737 KIF5CO60282 957 aa13.94□□□□□ -0.18
LINC01088-201ENST00000437737 CREG1O75629 220 aa13.94□□□□□ -0.18
LINC01088-201ENST00000437737 KIAA0754O94854 1291 aa13.94□□□□□ -0.18
LINC01088-201ENST00000437737 EML2O95834 649 aa13.94□□□□□ -0.18
LINC01088-201ENST00000437737 CCNYL3P0C7X3 344 aa13.94□□□□□ -0.18
LINC01088-201ENST00000437737 LHCGRP22888 699 aa13.94□□□□□ -0.18
LINC01088-201ENST00000437737 RENBPP51606 427 aa13.94□□□□□ -0.18
LINC01088-201ENST00000437737 PGDP52209 483 aa13.94□□□□□ -0.18
LINC01088-201ENST00000437737 EPHA4P54764 986 aa13.94□□□□□ -0.18
LINC01088-201ENST00000437737 AIF1P55008 147 aa13.94□□□□□ -0.18
LINC01088-201ENST00000437737 SEMA5AQ13591 1074 aa13.94□□□□□ -0.18
LINC01088-201ENST00000437737 RFTN1Q14699 578 aaPredicted RBP13.94□□□□□ -0.18
LINC01088-201ENST00000437737 EIF2S3LQ2VIR3 472 aaKnown RBP13.94□□□□□ -0.18
LINC01088-201ENST00000437737 APLFQ8IW19 511 aaPredicted RBP13.94□□□□□ -0.18
LINC01088-201ENST00000437737 REXO1L1PQ8IX06 675 aa13.94□□□□□ -0.18
LINC01088-201ENST00000437737 PRR7Q8TB68 274 aa13.94□□□□□ -0.18
LINC01088-201ENST00000437737 SCARF2Q96GP6 870 aaPredicted RBP13.94□□□□□ -0.18
LINC01088-201ENST00000437737 NSMCE3Q96MG7 304 aa13.94□□□□□ -0.18
LINC01088-201ENST00000437737 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.94□□□□□ -0.18
LINC01088-201ENST00000437737 MRPL47Q9HD33 250 aaKnown RBP13.94□□□□□ -0.18
LINC01088-201ENST00000437737 ADAM22Q9P0K1 906 aa13.94□□□□□ -0.18
LINC01088-201ENST00000437737 MAP10Q9P2G4 905 aa13.94□□□□□ -0.18
LINC01088-201ENST00000437737 CNOT8Q9UFF9 292 aaKnown RBP13.94□□□□□ -0.18
LINC01088-201ENST00000437737 CD84Q9UIB8 345 aa13.94□□□□□ -0.18
LINC01088-201ENST00000437737 LCMT1Q9UIC8 334 aa13.94□□□□□ -0.18
LINC01088-201ENST00000437737 PCDHGC4Q9Y5F7 938 aa13.94□□□□□ -0.18
LINC01088-201ENST00000437737 NPIPB15A6NHN6 443 aaPredicted RBP13.93□□□□□ -0.18
LINC01088-201ENST00000437737 EEF2KO00418 725 aaKnown RBP13.93□□□□□ -0.18
LINC01088-201ENST00000437737 SOCS5O75159 536 aa13.93□□□□□ -0.18
LINC01088-201ENST00000437737 ASMTLO95671 621 aa13.93□□□□□ -0.18
LINC01088-201ENST00000437737 HTR7P34969 479 aa13.93□□□□□ -0.18
LINC01088-201ENST00000437737 IL10RBQ08334 325 aa13.93□□□□□ -0.18
LINC01088-201ENST00000437737 TCEAL1Q15170 157 aa13.93□□□□□ -0.18
LINC01088-201ENST00000437737 ARHGAP36Q6ZRI8 547 aa13.93□□□□□ -0.18
LINC01088-201ENST00000437737 CHST15Q7LFX5 561 aaPredicted RBP13.93□□□□□ -0.18
LINC01088-201ENST00000437737 LYSMD3Q7Z3D4 306 aa13.93□□□□□ -0.18
LINC01088-201ENST00000437737 PLXDC1Q8IUK5 500 aa13.93□□□□□ -0.18
LINC01088-201ENST00000437737 MCOLN2Q8IZK6 566 aa13.93□□□□□ -0.18
LINC01088-201ENST00000437737 AP2M1Q96CW1 435 aa13.93□□□□□ -0.18
LINC01088-201ENST00000437737 ELMO2Q96JJ3 720 aa13.93□□□□□ -0.18
LINC01088-201ENST00000437737 OR6C1Q96RD1 312 aa13.93□□□□□ -0.18
LINC01088-201ENST00000437737 SLC25A23Q9BV35 468 aa13.93□□□□□ -0.18
LINC01088-201ENST00000437737 TBC1D10AQ9BXI6 508 aa13.93□□□□□ -0.18
LINC01088-201ENST00000437737 TRIM55Q9BYV6 548 aa13.93□□□□□ -0.18
LINC01088-201ENST00000437737 SLC29A3Q9BZD2 475 aa13.93□□□□□ -0.18
LINC01088-201ENST00000437737 EPB41L1Q9H4G0 881 aa13.93□□□□□ -0.18
LINC01088-201ENST00000437737 LZTFL1Q9NQ48 299 aa13.93□□□□□ -0.18
LINC01088-201ENST00000437737 ZNHIT2Q9UHR6 403 aa13.93□□□□□ -0.18
LINC01088-201ENST00000437737 LNPEPQ9UIQ6 1025 aa13.93□□□□□ -0.18
LINC01088-201ENST00000437737 PHTF1Q9UMS5 762 aa13.93□□□□□ -0.18
LINC01088-201ENST00000437737 SCINQ9Y6U3 715 aa13.93□□□□□ -0.18
LINC01088-201ENST00000437737 CENPEQ02224 2701 aa13.92□□□□□ -0.18
LINC01088-201ENST00000437737 MN1Q10571 1320 aaPredicted RBP13.92□□□□□ -0.18
LINC01088-201ENST00000437737 TCP11X1B4DZS4 312 aa13.92□□□□□ -0.18
LINC01088-201ENST00000437737 DAPK3O43293 454 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms