RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 MT-CYBP00156 380 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 IFIT1P09914 478 aaKnown RBP2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 ERVK-10P10266 1014 aa2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 CNTFP26441 200 aa2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 HOXA13P31271 388 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 GPD2P43304 727 aa2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 METAP2P50579 478 aaKnown RBP eCLIP2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 ZNF239Q16600 458 aaKnown RBP2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 SGO1Q5FBB7 561 aa2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 TCTE1Q5JU00 501 aa2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 OR7E24Q6IFN5 339 aa2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 FAM53AQ6NSI3 398 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 METTL2BQ6P1Q9 378 aaKnown RBP2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 LRRC8DQ7L1W4 858 aa2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 TADA2BQ86TJ2 420 aa2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 TRPT1Q86TN4 253 aaKnown RBP2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 ZBTB2Q8N680 514 aa2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 HTRA1Q92743 480 aa2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 METTL2AQ96IZ6 378 aaKnown RBP2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 QRFPRQ96P65 431 aa2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 SEC62Q99442 399 aaKnown RBP2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 PCYT2Q99447 389 aa2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 CDK19Q9BWU1 502 aa2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 GPR63Q9BZJ6 419 aa2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 KCNN2Q9H2S1 579 aa2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 JMJD4Q9H9V9 463 aa2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 UBN1Q9NPG3 1134 aa2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 GPR108Q9NPR9 543 aa2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 GGA3Q9NZ52 723 aa2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 POLG2Q9UHN1 485 aa2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 TBX20Q9UMR3 447 aa2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 FAM96BQ9Y3D0 163 aa2.99□□□□□ -1.93
HMGB1P31-201ENST00000437242 KLK10O43240 276 aa2.98□□□□□ -1.93
HMGB1P31-201ENST00000437242 ZNF821O75541 412 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P31-201ENST00000437242 HOXC8P31273 242 aa2.98□□□□□ -1.93
HMGB1P31-201ENST00000437242 AMPHP49418 695 aa2.98□□□□□ -1.93
HMGB1P31-201ENST00000437242 RPL24P83731 157 aaKnown RBP2.98□□□□□ -1.93
HMGB1P31-201ENST00000437242 ITGA9Q13797 1035 aa2.98□□□□□ -1.93
HMGB1P31-201ENST00000437242 ZNF667Q5HYK9 610 aa2.98□□□□□ -1.93
HMGB1P31-201ENST00000437242 GGNBP1Q5YKI7 109 aa2.98□□□□□ -1.93
HMGB1P31-201ENST00000437242 FBXO46Q6PJ61 603 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P31-201ENST00000437242 RBMS3Q6XE24 437 aaKnown RBP2.98□□□□□ -1.93
HMGB1P31-201ENST00000437242 SPATA6LQ8N4H0 392 aa2.98□□□□□ -1.93
HMGB1P31-201ENST00000437242 ANKRD52Q8NB46 1076 aa2.98□□□□□ -1.93
HMGB1P31-201ENST00000437242 TRIM58Q8NG06 486 aa2.98□□□□□ -1.93
HMGB1P31-201ENST00000437242 NOC3LQ8WTT2 800 aaKnown RBP2.98□□□□□ -1.93
HMGB1P31-201ENST00000437242 FAM222BQ8WU58 562 aa2.98□□□□□ -1.93
HMGB1P31-201ENST00000437242 EYA3Q99504 573 aa2.98□□□□□ -1.93
HMGB1P31-201ENST00000437242 MAF1Q9H063 256 aa2.98□□□□□ -1.93
HMGB1P31-201ENST00000437242 TAOK3Q9H2K8 898 aa2.98□□□□□ -1.93
HMGB1P31-201ENST00000437242 PLEKHA4Q9H4M7 779 aa2.98□□□□□ -1.93
HMGB1P31-201ENST00000437242 MMP25Q9NPA2 562 aa2.98□□□□□ -1.93
HMGB1P31-201ENST00000437242 HINT3Q9NQE9 182 aaKnown RBP2.98□□□□□ -1.93
HMGB1P31-201ENST00000437242 ZDHHC18Q9NUE0 388 aa2.98□□□□□ -1.93
HMGB1P31-201ENST00000437242 INTS10Q9NVR2 710 aaKnown RBP2.98□□□□□ -1.93
HMGB1P31-201ENST00000437242 BEX4Q9NWD9 120 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P31-201ENST00000437242 GLI2P10070 1586 aa2.98□□□□□ -1.93
HMGB1P31-201ENST00000437242 FRMPD1Q5SYB0 1578 aa2.98□□□□□ -1.93
HMGB1P31-201ENST00000437242 DISP3Q9P2K9 1392 aa2.98□□□□□ -1.93
HMGB1P31-201ENST00000437242 PTPRCP08575 1304 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 BCORL1Q5H9F3 1711 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 PCF11O94913 1555 aaKnown RBP2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 FHAD1B1AJZ9 1412 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 GOLGA6L10A0A0M3HER8 536 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 MEIOCA2RUB1 952 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 CTAGE9A4FU28 777 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 GAGE10A6NGK3 116 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 J3KRW8 73 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 CLIC2O15247 247 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 EPB41L2O43491 1005 aaKnown RBP2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 HEXAP06865 529 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 CTAGE8P0CG41 777 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 FAM106CPP0CH98 169 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 ZNF26P17031 533 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 PGM1P36871 562 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 ARL1P40616 181 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 BAK1Q16611 211 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 KRTAP13-3Q3SY46 172 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 BSPRYQ5W0U4 402 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 FAAP20Q6NZ36 180 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 DUS1LQ6P1R4 473 aaKnown RBP2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 ADGRG6Q86SQ4 1221 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 CTAGE4Q8IX94 777 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 ZNF440Q8IYI8 595 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 PCDH20Q8N6Y1 951 aaKnown RBP2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 PCYOX1LQ8NBM8 494 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 LSM14AQ8ND56 463 aaKnown RBP2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 HUS1BQ8NHY5 278 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 ZCCHC10Q8TBK6 192 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 SLC38A5Q8WUX1 472 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 STAMQ92783 540 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 MPP4Q96JB8 637 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 MPHOSPH8Q99549 860 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 EIF2AK1Q9BQI3 630 aaKnown RBP2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 BICC1Q9H694 974 aaKnown RBP2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 FGF22Q9HCT0 170 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 PPP1R14DQ9NXH3 145 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 CNOT7Q9UIV1 285 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms