RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 KCND3Q9UK17 655 aa14.64□□□□□ -0.07
HDAC8-213ENST00000436675 CNOT6Q9ULM6 557 aaKnown RBP14.64□□□□□ -0.07
HDAC8-213ENST00000436675 SIK3Q9Y2K2 1263 aa14.64□□□□□ -0.07
HDAC8-213ENST00000436675 PPIL1Q9Y3C6 166 aa14.64□□□□□ -0.07
HDAC8-213ENST00000436675 SLC30A1Q9Y6M5 507 aa14.64□□□□□ -0.07
HDAC8-213ENST00000436675 MAFKO60675 156 aa14.63□□□□□ -0.07
HDAC8-213ENST00000436675 SPAG6O75602 509 aa14.63□□□□□ -0.07
HDAC8-213ENST00000436675 RNF8O76064 485 aa14.63□□□□□ -0.07
HDAC8-213ENST00000436675 CLDN7O95471 211 aa14.63□□□□□ -0.07
HDAC8-213ENST00000436675 ANKRD34CP0C6C1 535 aa14.63□□□□□ -0.07
HDAC8-213ENST00000436675 SLC2A4P14672 509 aa14.63□□□□□ -0.07
HDAC8-213ENST00000436675 CCL11P51671 97 aa14.63□□□□□ -0.07
HDAC8-213ENST00000436675 PGDP52209 483 aa14.63□□□□□ -0.07
HDAC8-213ENST00000436675 STC1P52823 247 aa14.63□□□□□ -0.07
HDAC8-213ENST00000436675 UBE2HP62256 183 aa14.63□□□□□ -0.07
HDAC8-213ENST00000436675 RPS18P62269 152 aaKnown RBP14.63□□□□□ -0.07
HDAC8-213ENST00000436675 MRPL49Q13405 166 aaKnown RBP14.63□□□□□ -0.07
HDAC8-213ENST00000436675 MARC1Q5VT66 337 aa14.63□□□□□ -0.07
HDAC8-213ENST00000436675 ZNF765Q7L2R6 523 aa14.63□□□□□ -0.07
HDAC8-213ENST00000436675 ATPAF2Q8N5M1 289 aa14.63□□□□□ -0.07
HDAC8-213ENST00000436675 NEK11Q8NG66 645 aa14.63□□□□□ -0.07
HDAC8-213ENST00000436675 NSMCE1Q8WV22 266 aa14.63□□□□□ -0.07
HDAC8-213ENST00000436675 PLEKHG4BQ96PX9 1271 aa14.63□□□□□ -0.07
HDAC8-213ENST00000436675 EPB41L1Q9H4G0 881 aa14.63□□□□□ -0.07
HDAC8-213ENST00000436675 SCHIP1Q9P0W5 487 aaPredicted RBP14.63□□□□□ -0.07
HDAC8-213ENST00000436675 PADI1Q9ULC6 663 aa14.63□□□□□ -0.07
HDAC8-213ENST00000436675 MAP4K5Q9Y4K4 846 aa14.63□□□□□ -0.07
HDAC8-213ENST00000436675 ANKRD17O75179 2603 aaKnown RBP14.63□□□□□ -0.07
HDAC8-213ENST00000436675 KIR2DS5A0A0G2JLQ3 304 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 A0A0G2JNG1 304 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 A0A0J9YYE9 177 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 LILRA5A6NI73 299 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 FADS2P1A8MWK0 482 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 H3BRJ5 948 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 KIR2DS3K7RE56 304 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 UBXN7O94888 489 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 TIAF1O95411 115 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 TRBC1P01850 177 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 C9P02748 559 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 PYGLP06737 847 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 TPM2P07951 284 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 HCAR3P49019 387 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 UBE2IP63279 158 aaKnown RBP14.62□□□□□ -0.07
HDAC8-213ENST00000436675 SEMA5AQ13591 1074 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 KIR2DS5Q14953 304 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 SMTNL2Q2TAL5 461 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 PLA2G4EQ3MJ16 856 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 TMCO3Q6UWJ1 677 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 FAM92BQ6ZTR7 304 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 APLFQ8IW19 511 aaPredicted RBP14.62□□□□□ -0.07
HDAC8-213ENST00000436675 TRIM48Q8IWZ4 208 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 PRR7Q8TB68 274 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 SLC25A23Q9BV35 468 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 CLSTN2Q9H4D0 955 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 ACTL8Q9H568 366 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 ZWILCHQ9H900 591 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 AKIRIN1Q9H9L7 192 aaPredicted RBP14.62□□□□□ -0.07
HDAC8-213ENST00000436675 KLC4Q9NSK0 619 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 PARVAQ9NVD7 372 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 VPS18Q9P253 973 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 CHKBQ9Y259 395 aa14.62□□□□□ -0.07
HDAC8-213ENST00000436675 ARGFXA6NJG6 315 aa14.61□□□□□ -0.07
HDAC8-213ENST00000436675 OR5K4A6NMS3 321 aa14.61□□□□□ -0.07
HDAC8-213ENST00000436675 GRID2O43424 1007 aa14.61□□□□□ -0.07
HDAC8-213ENST00000436675 FZD6O60353 706 aa14.61□□□□□ -0.07
HDAC8-213ENST00000436675 VIPP01282 170 aa14.61□□□□□ -0.07
HDAC8-213ENST00000436675 ZNF30P17039 623 aa14.61□□□□□ -0.07
HDAC8-213ENST00000436675 ARL4AP40617 200 aa14.61□□□□□ -0.07
HDAC8-213ENST00000436675 GARSP41250 739 aaKnown RBP14.61□□□□□ -0.07
HDAC8-213ENST00000436675 IHHQ14623 411 aa14.61□□□□□ -0.07
HDAC8-213ENST00000436675 IL11RAQ14626 422 aa14.61□□□□□ -0.07
HDAC8-213ENST00000436675 SEPT7Q16181 437 aaKnown RBP14.61□□□□□ -0.07
HDAC8-213ENST00000436675 CACHD1Q5VU97 1274 aa14.61□□□□□ -0.07
HDAC8-213ENST00000436675 FAM199XQ6PEV8 388 aaPredicted RBP14.61□□□□□ -0.07
HDAC8-213ENST00000436675 CRTC3Q6UUV7 619 aa14.61□□□□□ -0.07
HDAC8-213ENST00000436675 TMEM26Q6ZUK4 368 aa14.61□□□□□ -0.07
HDAC8-213ENST00000436675 NLRP8Q86W28 1048 aa14.61□□□□□ -0.07
HDAC8-213ENST00000436675 PHYKPLQ8IUZ5 450 aa14.61□□□□□ -0.07
HDAC8-213ENST00000436675 HSPH1Q92598 858 aa14.61□□□□□ -0.07
HDAC8-213ENST00000436675 WDR24Q96S15 920 aa14.61□□□□□ -0.07
HDAC8-213ENST00000436675 MFRPQ9BY79 579 aa14.61□□□□□ -0.07
HDAC8-213ENST00000436675 OR2AG1Q9H205 316 aa14.61□□□□□ -0.07
HDAC8-213ENST00000436675 ZNF768Q9H5H4 540 aaKnown RBP14.61□□□□□ -0.07
HDAC8-213ENST00000436675 LHX9Q9NQ69 397 aa14.61□□□□□ -0.07
HDAC8-213ENST00000436675 ATXN10Q9UBB4 475 aa14.61□□□□□ -0.07
HDAC8-213ENST00000436675 TTLL3Q9Y4R7 772 aa14.61□□□□□ -0.07
HDAC8-213ENST00000436675 TMEM191CA6NGB0 347 aa14.6□□□□□ -0.07
HDAC8-213ENST00000436675 TCP11X1B4DZS4 312 aa14.6□□□□□ -0.07
HDAC8-213ENST00000436675 LRCH4O75427 683 aa14.6□□□□□ -0.07
HDAC8-213ENST00000436675 CLDN1O95832 211 aa14.6□□□□□ -0.07
HDAC8-213ENST00000436675 TCF4P15884 667 aa14.6□□□□□ -0.07
HDAC8-213ENST00000436675 ZNF8P17098 575 aaPredicted RBP14.6□□□□□ -0.07
HDAC8-213ENST00000436675 DCTP40126 519 aa14.6□□□□□ -0.07
HDAC8-213ENST00000436675 SLC19A1P41440 591 aa14.6□□□□□ -0.07
HDAC8-213ENST00000436675 CDH6P55285 790 aa14.6□□□□□ -0.07
HDAC8-213ENST00000436675 DSC2Q02487 901 aa14.6□□□□□ -0.07
HDAC8-213ENST00000436675 INPP5JQ15735 1006 aaPredicted RBP14.6□□□□□ -0.07
HDAC8-213ENST00000436675 RALGPS1Q5JS13 557 aa14.6□□□□□ -0.07
HDAC8-213ENST00000436675 PLEKHA7Q6IQ23 1121 aa14.6□□□□□ -0.07
HDAC8-213ENST00000436675 IRGCQ6NXR0 463 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms