RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 CCL14Q16627 93 aa7.38□□□□□ -1.23
SYNPO2-203ENST00000434046 ZFP69Q49AA0 526 aa7.38□□□□□ -1.23
SYNPO2-203ENST00000434046 AGAP7PQ5VUJ5 663 aa7.38□□□□□ -1.23
SYNPO2-203ENST00000434046 NCBP2-AS2Q69YL0 99 aa7.38□□□□□ -1.23
SYNPO2-203ENST00000434046 NAPEPLDQ6IQ20 393 aa7.38□□□□□ -1.23
SYNPO2-203ENST00000434046 NEPROQ6NW34 567 aa7.38□□□□□ -1.23
SYNPO2-203ENST00000434046 NEK5Q6P3R8 708 aa7.38□□□□□ -1.23
SYNPO2-203ENST00000434046 DCLRE1AQ6PJP8 1040 aa7.38□□□□□ -1.23
SYNPO2-203ENST00000434046 ARHGAP36Q6ZRI8 547 aa7.38□□□□□ -1.23
SYNPO2-203ENST00000434046 P2RY8Q86VZ1 359 aa7.38□□□□□ -1.23
SYNPO2-203ENST00000434046 TP53INP2Q8IXH6 220 aa7.38□□□□□ -1.23
SYNPO2-203ENST00000434046 LGI2Q8N0V4 545 aa7.38□□□□□ -1.23
SYNPO2-203ENST00000434046 PCSK9Q8NBP7 692 aaKnown RBP7.38□□□□□ -1.23
SYNPO2-203ENST00000434046 PPHLN1Q8NEY8 458 aaKnown RBP7.38□□□□□ -1.23
SYNPO2-203ENST00000434046 LILRB4Q8NHJ6 448 aa7.38□□□□□ -1.23
SYNPO2-203ENST00000434046 NDNFQ8TB73 568 aa7.38□□□□□ -1.23
SYNPO2-203ENST00000434046 STYXQ8WUJ0 223 aa7.38□□□□□ -1.23
SYNPO2-203ENST00000434046 TMEM174Q8WUU8 243 aa7.38□□□□□ -1.23
SYNPO2-203ENST00000434046 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.38□□□□□ -1.23
SYNPO2-203ENST00000434046 C19orf60Q96EN9 201 aa7.38□□□□□ -1.23
SYNPO2-203ENST00000434046 TSPAN18Q96SJ8 248 aa7.38□□□□□ -1.23
SYNPO2-203ENST00000434046 THUMPD3Q9BV44 507 aaKnown RBP7.38□□□□□ -1.23
SYNPO2-203ENST00000434046 NFKBIZQ9BYH8 718 aa7.38□□□□□ -1.23
SYNPO2-203ENST00000434046 RHOBTB2Q9BYZ6 727 aa7.38□□□□□ -1.23
SYNPO2-203ENST00000434046 RMND5AQ9H871 391 aa7.38□□□□□ -1.23
SYNPO2-203ENST00000434046 NUDT5Q9UKK9 219 aa7.38□□□□□ -1.23
SYNPO2-203ENST00000434046 PTGDR2Q9Y5Y4 395 aa7.38□□□□□ -1.23
SYNPO2-203ENST00000434046 GOLGA8CPA6NN73 597 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 TBKBP1A7MCY6 615 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 CLDN5O00501 218 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 LRIG2O94898 1065 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 F9P00740 461 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 FTH1P02794 183 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 CAPN1P07384 714 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 NPR3P17342 541 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 GJA5P36382 358 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 MTHFRP42898 656 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 MAGEA3P43357 314 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 HNRNPFP52597 415 aaKnown RBP7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 GRB14Q14449 540 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 TRIP4Q15650 581 aaPredicted RBP7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 ATP6AP1Q15904 470 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 SMU1Q2TAY7 513 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 CYBRD1Q53TN4 286 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 GALNT5Q7Z7M9 940 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 TMBIM1Q969X1 311 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 FAM162AQ96A26 154 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 CEP295NLQ96MC4 621 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 PPM1MQ96MI6 270 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 LPIN3Q9BQK8 851 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 C16orf70Q9BSU1 422 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 IRF2BPLQ9H1B7 796 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 RIBC2Q9H4K1 309 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 VRTNQ9H8Y1 702 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 AGPAT4Q9NRZ5 378 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 TRMT13Q9NUP7 481 aaKnown RBP7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 FAM105AQ9NUU6 356 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 ARMC1Q9NVT9 282 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 TEKT2Q9UIF3 430 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 SPO11Q9Y5K1 396 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 PMF1-BGLAPU3KQ54 211 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 CCDC154A6NI56 674 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 ZSCAN5BA6NJL1 495 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 ZNF99A8MXY4 864 aaPredicted RBP7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 G3V2T6 193 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 MDM4O15151 490 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 TRIM24O15164 1050 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 RFPL2O75678 378 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 SOAT2O75908 522 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 TOMM70O94826 608 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 IPO13O94829 963 aaKnown RBP7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 CST1P01037 141 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 AHSGP02765 367 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 BDNFP23560 247 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 SHMT2P34897 504 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 NOS2P35228 1153 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 NUMBP49757 651 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 NCS1P62166 190 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 CDH17Q12864 832 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 LAPTM5Q13571 262 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 TUBA3CQ13748 450 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 DAG1Q14118 895 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 SIM2Q14190 667 aaPredicted RBP7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 SKIV2LQ15477 1246 aaKnown RBP7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 GLYATQ6IB77 296 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 OVOS1Q6IE37 1185 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 ZC3HC1Q86WB0 502 aaKnown RBP7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 LRRC49Q8IUZ0 686 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 PEX5LQ8IYB4 626 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 LSMEM2Q8N112 164 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 PNPLA1Q8N8W4 532 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 SMG8Q8ND04 991 aaKnown RBP7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 MCOLN3Q8TDD5 553 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 FAR1Q8WVX9 515 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 CCDC126Q96EE4 140 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 ADAM2Q99965 735 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 TBCDQ9BTW9 1192 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 FICDQ9BVA6 458 aa7.37□□□□□ -1.23
SYNPO2-203ENST00000434046 YTHDF1Q9BYJ9 559 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms