RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 UNKQ9C0B0 810 aaKnown RBP3.75□□□□□ -1.81
SHPRH-205ENST00000433355 KIAA1522Q9P206 1035 aaPredicted RBP3.75□□□□□ -1.81
SHPRH-205ENST00000433355 KIF17Q9P2E2 1029 aa3.75□□□□□ -1.81
SHPRH-205ENST00000433355 MRTO4Q9UKD2 239 aaKnown RBP3.75□□□□□ -1.81
SHPRH-205ENST00000433355 TRAV19A0A0A6YYK7 116 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 FAM220BPB1ANY3 271 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 PSME3P61289 254 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 PCBP2Q15366 365 aaKnown RBP eCLIP3.74□□□□□ -1.81
SHPRH-205ENST00000433355 BSPRYQ5W0U4 402 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 KIAA1211LQ6NV74 962 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 SLC39A4Q6P5W5 647 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 SYCE2Q6PIF2 218 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 ZBTB33Q86T24 672 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 HORMAD1Q86X24 394 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 PCDH19Q8TAB3 1148 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 OLIG1Q8TAK6 271 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 ACOT12Q8WYK0 555 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 PABPC5Q96DU9 382 aaKnown RBP3.74□□□□□ -1.81
SHPRH-205ENST00000433355 CCDC138Q96M89 665 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 ELP3Q9H9T3 547 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 CHST7Q9NS84 486 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 FAM49BQ9NUQ9 324 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 KLHL3Q9UH77 587 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 CDH22Q9UJ99 828 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 ST3GAL5Q9UNP4 418 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 DHRS12A0PJE2 317 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 RCCD1A6NED2 376 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 TRIM3O75382 744 aaPredicted RBP3.74□□□□□ -1.81
SHPRH-205ENST00000433355 RCAN2Q14206 197 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 ELAVL3Q14576 367 aaKnown RBP3.74□□□□□ -1.81
SHPRH-205ENST00000433355 GLRA4Q5JXX5 417 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 PLEKHS1Q5SXH7 462 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 SDE2Q6IQ49 451 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 ZBTB49Q6ZSB9 765 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 ACOT1Q86TX2 421 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 BRINP2Q9C0B6 783 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 POLMQ9NP87 494 aaPredicted RBP3.74□□□□□ -1.81
SHPRH-205ENST00000433355 UBAP1Q9NZ09 502 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 LMCD1Q9NZU5 365 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 DUXAA6NLW8 204 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 ARNTLO00327 626 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 ZMYND10O75800 440 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 ADCY1Q08828 1119 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 FSTL1Q12841 308 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 VEZF1Q14119 521 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 SIX1Q15475 284 aaPredicted RBP3.74□□□□□ -1.81
SHPRH-205ENST00000433355 SLC5A9Q2M3M2 681 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 NXNQ6DKJ4 435 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 TTC19Q6DKK2 380 aaPredicted RBP3.74□□□□□ -1.81
SHPRH-205ENST00000433355 C4orf33Q8N1A6 199 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 CPXM2Q8N436 756 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 MARVELD2Q8N4S9 558 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 COLGALT1Q8NBJ5 622 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 TRPV1Q8NER1 839 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 MGARPQ8TDB4 240 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 HDAC2Q92769 488 aaKnown RBP3.74□□□□□ -1.81
SHPRH-205ENST00000433355 SEMA3GQ9NS98 782 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 HEY2Q9UBP5 337 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 PCSK1NQ9UHG2 260 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 ARHGEF9O43307 516 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 E2F6O75461 281 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 RNASE9P60153 205 aaKnown RBP3.74□□□□□ -1.81
SHPRH-205ENST00000433355 PCDH1Q08174 1060 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 FAM133BQ5BKY9 247 aaKnown RBP3.74□□□□□ -1.81
SHPRH-205ENST00000433355 BICRALQ6AI39 1079 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 RABEPKQ7Z6M1 372 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 C11orf65Q8NCR3 313 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 TSPAN14Q8NG11 270 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 OR4L1Q8NH43 312 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 PSMA8Q8TAA3 256 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 PCDHB18PQ96TA0 734 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 ZBTB26Q9HCK0 441 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 PRM3Q9NNZ6 103 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 DTLQ9NZJ0 730 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 SELENONQ9NZV5 590 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 RNF112Q9ULX5 631 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 GINS2Q9Y248 185 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 PCDHB7Q9Y5E2 793 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 DFFAO00273 331 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 MRASO14807 208 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 GRM6O15303 877 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 PRAMEF11O60813 436 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 RHOCP08134 193 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 GNA12Q03113 381 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 ITGA7Q13683 1181 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 CLPPQ16740 277 aaPredicted RBP3.74□□□□□ -1.81
SHPRH-205ENST00000433355 SOWAHAQ2M3V2 549 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 SLC10A6Q3KNW5 377 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 C11orf88Q6PI97 169 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 LONP2Q86WA8 852 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 DEFB107AQ8IZN7 70 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 FAR1Q8WVX9 515 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 CAPSLQ8WWF8 208 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 EEF2KMTQ96G04 330 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 ZNF558Q96NG5 402 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 CENPOQ9BU64 300 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 CPEB1Q9BZB8 566 aaKnown RBP3.74□□□□□ -1.81
SHPRH-205ENST00000433355 CPVLQ9H3G5 476 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 WWOXQ9NZC7 414 aa3.74□□□□□ -1.81
SHPRH-205ENST00000433355 ENTPD4Q9Y227 616 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms