RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 GAL3ST1Q99999 423 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 ITGA11Q9UKX5 1188 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 BCAS1O75363 584 aaPredicted RBP16.38■□□□□ 0.21
RIF1-204ENST00000430328 FABP3P05413 133 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 TFEBP19484 476 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 PARP6Q2NL67 630 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 ZNF550Q7Z398 422 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 WDR49Q8IV35 697 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 PIGXQ8TBF5 258 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 SLC7A6OSQ96CW6 309 aaPredicted RBP16.38■□□□□ 0.21
RIF1-204ENST00000430328 NELFAQ9H3P2 528 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 PRDM16Q9HAZ2 1276 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 LYARQ9NX58 379 aaKnown RBP16.38■□□□□ 0.21
RIF1-204ENST00000430328 ZNF518AQ6AHZ1 1483 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 UROSP10746 265 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 RNF220Q5VTB9 566 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 C7orf61Q8IZ16 206 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 TREX2Q9BQ50 279 aaPredicted RBP16.38■□□□□ 0.21
RIF1-204ENST00000430328 TUBB1Q9H4B7 451 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 PCDHGB1Q9Y5G3 927 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 MYO9BQ13459 2157 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 SLC25A27O95847 323 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 RRP1BQ14684 758 aaKnown RBP16.38■□□□□ 0.21
RIF1-204ENST00000430328 KCTD8Q6ZWB6 473 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 HASPINQ8TF76 798 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 IDI2Q9BXS1 227 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 ZDHHC6Q9H6R6 413 aa16.38■□□□□ 0.21
RIF1-204ENST00000430328 SLC1A2P43004 574 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 DNPEPQ9ULA0 475 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 ADAMDEC1O15204 470 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 GMFGO60234 142 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 ALDH2P05091 517 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 SNRPD1P62314 119 aaKnown RBP16.37■□□□□ 0.21
RIF1-204ENST00000430328 HERVK_113P62684 666 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 RPA4Q13156 261 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 DUS1LQ6P1R4 473 aaKnown RBP16.37■□□□□ 0.21
RIF1-204ENST00000430328 ATP6V1C2Q8NEY4 427 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 RHBDF1Q96CC6 855 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 CERS2Q96G23 380 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 DPAGT1Q9H3H5 408 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 PCDHGB2Q9Y5G2 931 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 GSG1L2A8MUP6 293 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 GIT2Q14161 759 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 GFOD2Q3B7J2 385 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 CNDP2Q96KP4 475 aaKnown RBP16.37■□□□□ 0.21
RIF1-204ENST00000430328 NPAS2Q99743 824 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 PTTG2Q9NZH5 202 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 UXTQ9UBK9 157 aaPredicted RBP16.37■□□□□ 0.21
RIF1-204ENST00000430328 MALT1Q9UDY8 824 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 FPGTO14772 594 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 ARPC2O15144 300 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 TULP3O75386 442 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 ARSHQ5FYA8 562 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 PLEKHA6Q9Y2H5 1048 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 CPDO75976 1380 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 CENPBD1B2RD01 187 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 DNAJA2O60884 412 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 ZNF20P17024 532 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 TMBIM6P55061 237 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 CLCA4Q14CN2 919 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 OR7D4Q8NG98 312 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 ZNF570Q96NI8 536 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 SSX3Q99909 188 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 S100A14Q9HCY8 104 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 MTMR4Q9NYA4 1195 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 RCOR3Q9P2K3 495 aaPredicted RBP16.37■□□□□ 0.21
RIF1-204ENST00000430328 HEG1Q9ULI3 1381 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 AMPD1P23109 780 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 MASP1P48740 699 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 TAF1CQ15572 869 aaPredicted RBP16.37■□□□□ 0.21
RIF1-204ENST00000430328 PLEKHG6Q3KR16 790 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 SUSD6Q92537 303 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 CXorf21Q9HAI6 301 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 FBXL21Q9UKT6 434 aa16.37■□□□□ 0.21
RIF1-204ENST00000430328 DISC1C4P0D8 188 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 AURKAO14965 403 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 PGLSO95336 258 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 AQP1P29972 269 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 MAGEA11P43364 429 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 E2F1Q01094 437 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 DPYSL3Q14195 570 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 NSMCE3Q96MG7 304 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 TSNAXQ99598 290 aaKnown RBP16.36■□□□□ 0.21
RIF1-204ENST00000430328 EIF5A2Q9GZV4 153 aaKnown RBP16.36■□□□□ 0.21
RIF1-204ENST00000430328 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.36■□□□□ 0.212e-7■■■■■ 31.2
RIF1-204ENST00000430328 LAMC1P11047 1609 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 A0A0J9YYE9 177 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 TACSTD2P09758 323 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 VAMP1P23763 118 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 USP4Q13107 963 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 TRPM4Q8TD43 1214 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 PEG3Q9GZU2 1588 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 PDE10AQ9Y233 779 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 A0A087X0B3 334 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 CPSF6Q16630 551 aaKnown RBP eCLIP16.36■□□□□ 0.21
RIF1-204ENST00000430328 PTPN20Q4JDL3 420 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 RAET1GQ6H3X3 334 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 FIP1L1Q6UN15 594 aaKnown RBP16.36■□□□□ 0.21
RIF1-204ENST00000430328 GIMAP5Q96F15 307 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 PARPBPQ9NWS1 579 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms