RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 RAD1O60671 282 aa14.74□□□□□ -0.05
MSH5-208ENST00000429846 ACP5P13686 325 aa14.74□□□□□ -0.05
MSH5-208ENST00000429846 MPSTP25325 297 aa14.74□□□□□ -0.05
MSH5-208ENST00000429846 HNRNPH3P31942 346 aaKnown RBP14.74□□□□□ -0.05
MSH5-208ENST00000429846 CD86P42081 329 aa14.74□□□□□ -0.05
MSH5-208ENST00000429846 CLCNKAP51800 687 aa14.74□□□□□ -0.05
MSH5-208ENST00000429846 DCDC1P59894 354 aa14.74□□□□□ -0.05
MSH5-208ENST00000429846 CYP4F2P78329 520 aa14.74□□□□□ -0.05
MSH5-208ENST00000429846 IFI35P80217 286 aaPredicted RBP14.74□□□□□ -0.05
MSH5-208ENST00000429846 SLC18A3Q16572 532 aa14.74□□□□□ -0.05
MSH5-208ENST00000429846 QPCTQ16769 361 aa14.74□□□□□ -0.05
MSH5-208ENST00000429846 ZFYVE27Q5T4F4 411 aa14.74□□□□□ -0.05
MSH5-208ENST00000429846 ANKS6Q68DC2 871 aa14.74□□□□□ -0.05
MSH5-208ENST00000429846 PDPK2PQ6A1A2 396 aa14.74□□□□□ -0.05
MSH5-208ENST00000429846 BORAQ6PGQ7 559 aa14.74□□□□□ -0.05
MSH5-208ENST00000429846 CEACAM20Q6UY09 585 aa14.74□□□□□ -0.05
MSH5-208ENST00000429846 ZNF761Q86XN6 746 aaPredicted RBP14.74□□□□□ -0.05
MSH5-208ENST00000429846 CATSPER2Q96P56 530 aa14.74□□□□□ -0.05
MSH5-208ENST00000429846 ZSCAN5AQ9BUG6 496 aa14.74□□□□□ -0.05
MSH5-208ENST00000429846 EFHD1Q9BUP0 239 aa14.74□□□□□ -0.05
MSH5-208ENST00000429846 SLC25A18Q9H1K4 315 aa14.74□□□□□ -0.05
MSH5-208ENST00000429846 RAD18Q9NS91 495 aa14.74□□□□□ -0.05
MSH5-208ENST00000429846 OCIAD1Q9NX40 245 aa14.74□□□□□ -0.05
MSH5-208ENST00000429846 NFKBIL1Q9UBC1 381 aaPredicted RBP14.74□□□□□ -0.05
MSH5-208ENST00000429846 TUBD1Q9UJT1 453 aa14.74□□□□□ -0.05
MSH5-208ENST00000429846 KCNK6Q9Y257 313 aa14.74□□□□□ -0.05
MSH5-208ENST00000429846 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.74□□□□□ -0.054e-7■□□□□ 11
MSH5-208ENST00000429846 TRBV23OR9-2A0A075B6M9 112 aa14.73□□□□□ -0.05
MSH5-208ENST00000429846 SYCE3A1L190 88 aa14.73□□□□□ -0.05
MSH5-208ENST00000429846 LILRA5A6NI73 299 aa14.73□□□□□ -0.05
MSH5-208ENST00000429846 GRID2O43424 1007 aa14.73□□□□□ -0.05
MSH5-208ENST00000429846 SUV39H1O43463 412 aa14.73□□□□□ -0.05
MSH5-208ENST00000429846 EML2O95834 649 aa14.73□□□□□ -0.05
MSH5-208ENST00000429846 TPM3P06753 285 aa14.73□□□□□ -0.05
MSH5-208ENST00000429846 MMP2P08253 660 aa14.73□□□□□ -0.05
MSH5-208ENST00000429846 LIFP15018 202 aa14.73□□□□□ -0.05
MSH5-208ENST00000429846 TAS2R40P59535 323 aa14.73□□□□□ -0.05
MSH5-208ENST00000429846 MC2RQ01718 297 aa14.73□□□□□ -0.05
MSH5-208ENST00000429846 SLC10A2Q12908 348 aaPredicted RBP14.73□□□□□ -0.05
MSH5-208ENST00000429846 SLC14A2Q15849 920 aa14.73□□□□□ -0.05
MSH5-208ENST00000429846 ZNF569Q5MCW4 686 aa14.73□□□□□ -0.05
MSH5-208ENST00000429846 NLGN4XQ8N0W4 816 aa14.73□□□□□ -0.05
MSH5-208ENST00000429846 NLGN4YQ8NFZ3 816 aaPredicted RBP14.73□□□□□ -0.05
MSH5-208ENST00000429846 KIAA1143Q96AT1 154 aaPredicted RBP14.73□□□□□ -0.05
MSH5-208ENST00000429846 RTP4Q96DX8 246 aa14.73□□□□□ -0.05
MSH5-208ENST00000429846 RNF157Q96PX1 679 aa14.73□□□□□ -0.05
MSH5-208ENST00000429846 UCK1Q9HA47 277 aa14.73□□□□□ -0.05
MSH5-208ENST00000429846 ZFYVE1Q9HBF4 777 aa14.73□□□□□ -0.05
MSH5-208ENST00000429846 FBXO8Q9NRD0 319 aa14.73□□□□□ -0.05
MSH5-208ENST00000429846 PILRAQ9UKJ1 303 aa14.73□□□□□ -0.05
MSH5-208ENST00000429846 PRKAB1Q9Y478 270 aa14.73□□□□□ -0.05
MSH5-208ENST00000429846 PCYT1BQ9Y5K3 369 aaPredicted RBP14.73□□□□□ -0.05
MSH5-208ENST00000429846 MN1Q10571 1320 aaPredicted RBP14.72□□□□□ -0.05
MSH5-208ENST00000429846 ZNF106Q9H2Y7 1883 aaKnown RBP14.72□□□□□ -0.05
MSH5-208ENST00000429846 KCNK1O00180 336 aa14.72□□□□□ -0.05
MSH5-208ENST00000429846 MTA2O94776 668 aa14.72□□□□□ -0.05
MSH5-208ENST00000429846 JCHAINP01591 159 aa14.72□□□□□ -0.05
MSH5-208ENST00000429846 ANKRD34CP0C6C1 535 aa14.72□□□□□ -0.05
MSH5-208ENST00000429846 KDELR1P24390 212 aa14.72□□□□□ -0.05
MSH5-208ENST00000429846 MAP4P27816 1152 aaKnown RBP14.72□□□□□ -0.05
MSH5-208ENST00000429846 CASP14P31944 242 aa14.72□□□□□ -0.05
MSH5-208ENST00000429846 ZBTB17Q13105 803 aa14.72□□□□□ -0.05
MSH5-208ENST00000429846 NFATC2Q13469 925 aa14.72□□□□□ -0.05
MSH5-208ENST00000429846 CPNE8Q86YQ8 564 aa14.72□□□□□ -0.05
MSH5-208ENST00000429846 PLXDC1Q8IUK5 500 aa14.72□□□□□ -0.05
MSH5-208ENST00000429846 PLD5Q8N7P1 536 aa14.72□□□□□ -0.05
MSH5-208ENST00000429846 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.72□□□□□ -0.05
MSH5-208ENST00000429846 NCSTNQ92542 709 aa14.72□□□□□ -0.05
MSH5-208ENST00000429846 SLC45A3Q96JT2 553 aa14.72□□□□□ -0.05
MSH5-208ENST00000429846 SRPK1Q96SB4 655 aaKnown RBP14.72□□□□□ -0.05
MSH5-208ENST00000429846 SPATA16Q9BXB7 569 aa14.72□□□□□ -0.05
MSH5-208ENST00000429846 TRIT1Q9H3H1 467 aaKnown RBP14.72□□□□□ -0.05
MSH5-208ENST00000429846 MAGEE1Q9HCI5 957 aa14.72□□□□□ -0.05
MSH5-208ENST00000429846 CPNE7Q9UBL6 633 aa14.72□□□□□ -0.05
MSH5-208ENST00000429846 IL17BQ9UHF5 180 aa14.72□□□□□ -0.05
MSH5-208ENST00000429846 ADGRG1Q9Y653 693 aa14.72□□□□□ -0.05
MSH5-208ENST00000429846 BOD1L1Q8NFC6 3051 aa14.72□□□□□ -0.05
MSH5-208ENST00000429846 SSU72P8A0A1W2PR75 194 aa14.71□□□□□ -0.05
MSH5-208ENST00000429846 LRRD1A4D1F6 860 aa14.71□□□□□ -0.05
MSH5-208ENST00000429846 PYCARD-AS1I3L0S3 204 aa14.71□□□□□ -0.05
MSH5-208ENST00000429846 PPP1R12AO14974 1030 aaPredicted RBP14.71□□□□□ -0.05
MSH5-208ENST00000429846 CHUKO15111 745 aa14.71□□□□□ -0.05
MSH5-208ENST00000429846 SNX2O60749 519 aa14.71□□□□□ -0.05
MSH5-208ENST00000429846 SLC25A14O95258 325 aaPredicted RBP14.71□□□□□ -0.05
MSH5-208ENST00000429846 TMEM253P0C7T8 217 aa14.71□□□□□ -0.05
MSH5-208ENST00000429846 NOP2P46087 812 aaKnown RBP14.71□□□□□ -0.05
MSH5-208ENST00000429846 ABHD18Q0P651 414 aa14.71□□□□□ -0.05
MSH5-208ENST00000429846 GALNT3Q14435 633 aa14.71□□□□□ -0.05
MSH5-208ENST00000429846 CLCA4Q14CN2 919 aa14.71□□□□□ -0.05
MSH5-208ENST00000429846 SNAP47Q5SQN1 464 aa14.71□□□□□ -0.05
MSH5-208ENST00000429846 SLC9A4Q6AI14 798 aa14.71□□□□□ -0.05
MSH5-208ENST00000429846 TRAM1L1Q8N609 369 aa14.71□□□□□ -0.05
MSH5-208ENST00000429846 CNTD1Q8N815 330 aa14.71□□□□□ -0.05
MSH5-208ENST00000429846 LRRN4Q8WUT4 740 aa14.71□□□□□ -0.05
MSH5-208ENST00000429846 RAPGEF5Q92565 580 aa14.71□□□□□ -0.05
MSH5-208ENST00000429846 IMP4Q96G21 291 aaKnown RBP14.71□□□□□ -0.05
MSH5-208ENST00000429846 TRIB3Q96RU7 358 aa14.71□□□□□ -0.05
MSH5-208ENST00000429846 SPRY4Q9C004 299 aa14.71□□□□□ -0.05
MSH5-208ENST00000429846 BRD8Q9H0E9 1235 aa14.71□□□□□ -0.05
MSH5-208ENST00000429846 DEF6Q9H4E7 631 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms