RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 GALNT6Q8NCL4 622 aa18.1■□□□□ 0.49
UPK3BP1-201ENST00000428678 C9orf72Q96LT7 481 aa18.1■□□□□ 0.49
UPK3BP1-201ENST00000428678 OSGEPL1Q9H4B0 414 aa18.1■□□□□ 0.49
UPK3BP1-201ENST00000428678 RMI1Q9H9A7 625 aa18.1■□□□□ 0.49
UPK3BP1-201ENST00000428678 PCDH18Q9HCL0 1135 aa18.1■□□□□ 0.49
UPK3BP1-201ENST00000428678 MRPL47Q9HD33 250 aaKnown RBP18.1■□□□□ 0.49
UPK3BP1-201ENST00000428678 CHMP5Q9NZZ3 219 aa18.1■□□□□ 0.49
UPK3BP1-201ENST00000428678 MYO6Q9UM54 1294 aa18.1■□□□□ 0.49
UPK3BP1-201ENST00000428678 POLHQ9Y253 713 aa18.1■□□□□ 0.49
UPK3BP1-201ENST00000428678 ZNF106Q9H2Y7 1883 aaKnown RBP18.09■□□□□ 0.49
UPK3BP1-201ENST00000428678 LRRC10BA6NIK2 292 aa18.09■□□□□ 0.49
UPK3BP1-201ENST00000428678 LRRC53A6NM62 1247 aa18.09■□□□□ 0.49
UPK3BP1-201ENST00000428678 OR5K4A6NMS3 321 aa18.09■□□□□ 0.49
UPK3BP1-201ENST00000428678 FURINP09958 794 aa18.09■□□□□ 0.49
UPK3BP1-201ENST00000428678 RARAP10276 462 aa18.09■□□□□ 0.49
UPK3BP1-201ENST00000428678 TYRP1P17643 537 aa18.09■□□□□ 0.49
UPK3BP1-201ENST00000428678 SEPHS1P49903 392 aa18.09■□□□□ 0.49
UPK3BP1-201ENST00000428678 ASIC2Q16515 512 aa18.09■□□□□ 0.49
UPK3BP1-201ENST00000428678 ZNF571Q7Z3V5 609 aaPredicted RBP18.09■□□□□ 0.49
UPK3BP1-201ENST00000428678 RASGRP3Q8IV61 690 aa18.09■□□□□ 0.49
UPK3BP1-201ENST00000428678 CCDC13Q8IYE1 715 aa18.09■□□□□ 0.49
UPK3BP1-201ENST00000428678 LPCAT1Q8NF37 534 aa18.09■□□□□ 0.49
UPK3BP1-201ENST00000428678 STAMBPL1Q96FJ0 436 aa18.09■□□□□ 0.49
UPK3BP1-201ENST00000428678 ELMO2Q96JJ3 720 aa18.09■□□□□ 0.49
UPK3BP1-201ENST00000428678 TGM7Q96PF1 710 aa18.09■□□□□ 0.49
UPK3BP1-201ENST00000428678 TDRD1Q9BXT4 1180 aaKnown RBP18.09■□□□□ 0.49
UPK3BP1-201ENST00000428678 HAUS4Q9H6D7 363 aa18.09■□□□□ 0.49
UPK3BP1-201ENST00000428678 PRDM8Q9NQV8 689 aa18.09■□□□□ 0.49
UPK3BP1-201ENST00000428678 C1orf232A0A0U1RR37 186 aa18.08■□□□□ 0.48
UPK3BP1-201ENST00000428678 CDC14CA4D256 554 aa18.08■□□□□ 0.48
UPK3BP1-201ENST00000428678 FADS2P1A8MWK0 482 aa18.08■□□□□ 0.48
UPK3BP1-201ENST00000428678 GRID2O43424 1007 aa18.08■□□□□ 0.48
UPK3BP1-201ENST00000428678 RFPL1O75677 317 aa18.08■□□□□ 0.48
UPK3BP1-201ENST00000428678 KIAA0754O94854 1291 aa18.08■□□□□ 0.48
UPK3BP1-201ENST00000428678 GZMAP12544 262 aa18.08■□□□□ 0.48
UPK3BP1-201ENST00000428678 CA4P22748 312 aa18.08■□□□□ 0.48
UPK3BP1-201ENST00000428678 UBE2IP63279 158 aaKnown RBP18.08■□□□□ 0.48
UPK3BP1-201ENST00000428678 SH3BP2P78314 561 aa18.08■□□□□ 0.48
UPK3BP1-201ENST00000428678 KRT81Q14533 505 aa18.08■□□□□ 0.48
UPK3BP1-201ENST00000428678 IHHQ14623 411 aa18.08■□□□□ 0.48
UPK3BP1-201ENST00000428678 HENMT1Q5T8I9 393 aaKnown RBP18.08■□□□□ 0.48
UPK3BP1-201ENST00000428678 TXNRD3NBQ6F5E7 133 aa18.08■□□□□ 0.48
UPK3BP1-201ENST00000428678 APTXQ7Z2E3 356 aaKnown RBP18.08■□□□□ 0.48
UPK3BP1-201ENST00000428678 LRRC49Q8IUZ0 686 aa18.08■□□□□ 0.48
UPK3BP1-201ENST00000428678 TRIM48Q8IWZ4 208 aa18.08■□□□□ 0.48
UPK3BP1-201ENST00000428678 TRIM11Q96F44 468 aa18.08■□□□□ 0.48
UPK3BP1-201ENST00000428678 PLEKHG4BQ96PX9 1271 aa18.08■□□□□ 0.48
UPK3BP1-201ENST00000428678 OR6C1Q96RD1 312 aa18.08■□□□□ 0.48
UPK3BP1-201ENST00000428678 WDR24Q96S15 920 aa18.08■□□□□ 0.48
UPK3BP1-201ENST00000428678 FAM83DQ9H4H8 585 aa18.08■□□□□ 0.48
UPK3BP1-201ENST00000428678 KLC4Q9NSK0 619 aa18.08■□□□□ 0.48
UPK3BP1-201ENST00000428678 OGFRQ9NZT2 677 aa18.08■□□□□ 0.48
UPK3BP1-201ENST00000428678 DDX3XO00571 662 aaKnown RBP eCLIP18.07■□□□□ 0.48
UPK3BP1-201ENST00000428678 MFSD11O43934 449 aa18.07■□□□□ 0.48
UPK3BP1-201ENST00000428678 NUAK1O60285 661 aa18.07■□□□□ 0.48
UPK3BP1-201ENST00000428678 RASSF9O75901 435 aa18.07■□□□□ 0.48
UPK3BP1-201ENST00000428678 UBXN7O94888 489 aa18.07■□□□□ 0.48
UPK3BP1-201ENST00000428678 NDUFA10O95299 355 aa18.07■□□□□ 0.48
UPK3BP1-201ENST00000428678 C9P02748 559 aa18.07■□□□□ 0.48
UPK3BP1-201ENST00000428678 AMD1P17707 334 aa18.07■□□□□ 0.48
UPK3BP1-201ENST00000428678 SPINT3P49223 89 aa18.07■□□□□ 0.48
UPK3BP1-201ENST00000428678 ZNF165P49910 485 aa18.07■□□□□ 0.48
UPK3BP1-201ENST00000428678 HIST2H2BCQ6DN03 193 aa18.07■□□□□ 0.48
UPK3BP1-201ENST00000428678 TMEM135Q86UB9 458 aa18.07■□□□□ 0.48
UPK3BP1-201ENST00000428678 RAVER1Q8IY67 606 aaKnown RBP18.07■□□□□ 0.48
UPK3BP1-201ENST00000428678 TEKT4Q8WW24 435 aa18.07■□□□□ 0.48
UPK3BP1-201ENST00000428678 TWSG1Q9GZX9 223 aa18.07■□□□□ 0.48
UPK3BP1-201ENST00000428678 CARD9Q9H257 536 aa18.07■□□□□ 0.48
UPK3BP1-201ENST00000428678 PCDH9Q9HC56 1237 aa18.07■□□□□ 0.48
UPK3BP1-201ENST00000428678 ARFGAP3Q9NP61 516 aa18.07■□□□□ 0.48
UPK3BP1-201ENST00000428678 HAUS2Q9NVX0 235 aa18.07■□□□□ 0.48
UPK3BP1-201ENST00000428678 RBM22Q9NW64 420 aaKnown RBP eCLIP18.07■□□□□ 0.48
UPK3BP1-201ENST00000428678 PKD2L2Q9NZM6 624 aa18.07■□□□□ 0.48
UPK3BP1-201ENST00000428678 LNPEPQ9UIQ6 1025 aa18.07■□□□□ 0.48
UPK3BP1-201ENST00000428678 KCND3Q9UK17 655 aa18.07■□□□□ 0.48
UPK3BP1-201ENST00000428678 TLK1Q9UKI8 766 aa18.07■□□□□ 0.48
UPK3BP1-201ENST00000428678 PIPSLA2A3N6 862 aa18.06■□□□□ 0.48
UPK3BP1-201ENST00000428678 VPS4BO75351 444 aa18.06■□□□□ 0.48
UPK3BP1-201ENST00000428678 AGFG2O95081 481 aa18.06■□□□□ 0.48
UPK3BP1-201ENST00000428678 PRLP01236 227 aa18.06■□□□□ 0.48
UPK3BP1-201ENST00000428678 VIPP01282 170 aa18.06■□□□□ 0.48
UPK3BP1-201ENST00000428678 MYBL1P10243 752 aa18.06■□□□□ 0.48
UPK3BP1-201ENST00000428678 ZNF8P17098 575 aaPredicted RBP18.06■□□□□ 0.48
UPK3BP1-201ENST00000428678 CES1P23141 567 aa18.06■□□□□ 0.48
UPK3BP1-201ENST00000428678 GARSP41250 739 aaKnown RBP18.06■□□□□ 0.48
UPK3BP1-201ENST00000428678 UQCRFS1P47985 274 aa18.06■□□□□ 0.48
UPK3BP1-201ENST00000428678 LEPRP48357 1165 aaKnown RBP18.06■□□□□ 0.48
UPK3BP1-201ENST00000428678 PMS2P54278 862 aa18.06■□□□□ 0.48
UPK3BP1-201ENST00000428678 MMRN1Q13201 1228 aa18.06■□□□□ 0.48
UPK3BP1-201ENST00000428678 IL11RAQ14626 422 aa18.06■□□□□ 0.48
UPK3BP1-201ENST00000428678 ESPL1Q14674 2120 aa18.06■□□□□ 0.48
UPK3BP1-201ENST00000428678 CCDC122Q5T0U0 273 aa18.06■□□□□ 0.48
UPK3BP1-201ENST00000428678 ALG1LQ6GMV1 187 aa18.06■□□□□ 0.48
UPK3BP1-201ENST00000428678 TIGD7Q6NT04 549 aaPredicted RBP18.06■□□□□ 0.48
UPK3BP1-201ENST00000428678 TMEM26Q6ZUK4 368 aa18.06■□□□□ 0.48
UPK3BP1-201ENST00000428678 EFCAB3Q8N7B9 438 aa18.06■□□□□ 0.48
UPK3BP1-201ENST00000428678 CCHCR1Q8TD31 782 aa18.06■□□□□ 0.48
UPK3BP1-201ENST00000428678 OR2AG1Q9H205 316 aa18.06■□□□□ 0.48
UPK3BP1-201ENST00000428678 UCK1Q9HA47 277 aa18.06■□□□□ 0.48
UPK3BP1-201ENST00000428678 ANO10Q9NW15 660 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms