RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 GAB3Q8WWW8 586 aa7.85□□□□□ -1.15
HMGA1P4-201ENST00000428643 GLYATL1Q969I3 302 aa7.85□□□□□ -1.15
HMGA1P4-201ENST00000428643 BIRC7Q96CA5 298 aa7.85□□□□□ -1.15
HMGA1P4-201ENST00000428643 SERAC1Q96JX3 654 aa7.85□□□□□ -1.15
HMGA1P4-201ENST00000428643 ZIM3Q96PE6 472 aa7.85□□□□□ -1.15
HMGA1P4-201ENST00000428643 VPS35Q96QK1 796 aa7.85□□□□□ -1.15
HMGA1P4-201ENST00000428643 KLF6Q99612 283 aaPredicted RBP7.85□□□□□ -1.15
HMGA1P4-201ENST00000428643 COPS8Q99627 209 aa7.85□□□□□ -1.15
HMGA1P4-201ENST00000428643 CPNE1Q99829 537 aa7.85□□□□□ -1.15
HMGA1P4-201ENST00000428643 ZCCHC2Q9C0B9 1178 aaKnown RBP7.85□□□□□ -1.15
HMGA1P4-201ENST00000428643 MIR1-1HGQ9H1L0 117 aa7.85□□□□□ -1.15
HMGA1P4-201ENST00000428643 ACBD3Q9H3P7 528 aa7.85□□□□□ -1.15
HMGA1P4-201ENST00000428643 CENPHQ9H3R5 247 aa7.85□□□□□ -1.15
HMGA1P4-201ENST00000428643 PPCSQ9HAB8 311 aa7.85□□□□□ -1.15
HMGA1P4-201ENST00000428643 MBNL1Q9NR56 388 aaKnown RBP7.85□□□□□ -1.15
HMGA1P4-201ENST00000428643 PHPT1Q9NRX4 125 aaPredicted RBP7.85□□□□□ -1.15
HMGA1P4-201ENST00000428643 VPS18Q9P253 973 aa7.85□□□□□ -1.15
HMGA1P4-201ENST00000428643 PSMC3IPQ9P2W1 217 aaPredicted RBP7.85□□□□□ -1.15
HMGA1P4-201ENST00000428643 DMTF1Q9Y222 760 aa7.85□□□□□ -1.15
HMGA1P4-201ENST00000428643 CA5BQ9Y2D0 317 aa7.85□□□□□ -1.15
HMGA1P4-201ENST00000428643 OR1A2Q9Y585 309 aa7.85□□□□□ -1.15
HMGA1P4-201ENST00000428643 TRBV5-4A0A0C4DH59 114 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 TLDC2A0PJX2 215 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 A6NNZ2 444 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 PRAMEF26H0Y7S4 382 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 CACNB4O00305 520 aaPredicted RBP7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 RASGRF2O14827 1237 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 OR1I1O60431 355 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 MTX2O75431 263 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 SLC25A14O95258 325 aaPredicted RBP7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 C1QAP02745 245 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 MYCLP1P12525 358 aaPredicted RBP7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 PTGER3P43115 390 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 CSE1LP55060 971 aaKnown RBP7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 CDK3Q00526 305 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 BMPR2Q13873 1038 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 GTF2H3Q13889 308 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 PTRHD1Q6GMV3 140 aaKnown RBP7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 LRIG3Q6UXM1 1119 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 GCNT7Q6ZNI0 430 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 DET1Q7L5Y6 550 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 GOLGA6L1Q8N7Z2 621 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 GPATCH11Q8N954 259 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 DDHD1Q8NEL9 900 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 CADM4Q8NFZ8 388 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 DTX3LQ8TDB6 740 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 DCAKDQ8WVC6 231 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 BTN2A2Q8WVV5 523 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 SLC44A1Q8WWI5 657 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 SCG3Q8WXD2 468 aaKnown RBP7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 ASB12Q8WXK4 309 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 LPGAT1Q92604 370 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 FOXJ1Q92949 421 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 CENPTQ96BT3 561 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 SGSM3Q96HU1 749 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 HIC2Q96JB3 615 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 VPS39Q96JC1 886 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 SLC6A18Q96N87 628 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 LENG8Q96PV6 779 aaPredicted RBP7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 TCF12Q99081 682 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 NDNQ99608 321 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 RBBP8Q99708 897 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 BOCQ9BWV1 1114 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 FAM126AQ9BYI3 521 aaPredicted RBP7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 CLPBQ9H078 707 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 CCDC68Q9H2F9 335 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 RHOJQ9H4E5 214 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 VIPAS39Q9H9C1 493 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 C11orf16Q9NQ32 467 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 AASDHPPTQ9NRN7 309 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 INTS10Q9NVR2 710 aaKnown RBP7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 ZNF446Q9NWS9 450 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 ZSCAN32Q9NX65 697 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 ZDHHC3Q9NYG2 299 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 CTNNAL1Q9UBT7 734 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 TBK1Q9UHD2 729 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 SLC24A2Q9UI40 661 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 TMPRSS11EQ9UL52 423 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 CRYL1Q9Y2S2 319 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 TRIOO75962 3097 aa7.84□□□□□ -1.15
HMGA1P4-201ENST00000428643 A0A1W2PPC4 97 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 POM121BA6NF01 834 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 METTL12A8MUP2 240 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 PRR33A8MZF0 331 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 H0Y8X5 98 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 PRMT5O14744 637 aaPredicted RBP7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 CDH16O75309 829 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 KRT37O76014 449 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 KRT38O76015 456 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 ASMTLO95671 621 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 S1PR4O95977 384 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 MYZAPP0CAP1 466 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 SP9P0CG40 484 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 ZNF7P17097 686 aaPredicted RBP7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 SAT1P21673 171 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 CD27P26842 260 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 TEAD1P28347 426 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 FMO4P31512 558 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 CA5AP35218 305 aa7.83□□□□□ -1.16
HMGA1P4-201ENST00000428643 SPRP35270 261 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms