RNA–Protein interactions for RNA: ENST00000427759.5

ATG7-208, Transcript of autophagy related 7, human

TSL 3

Gene ATG7, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG7-208	ENST00000427759	CIITA	P33076	1130 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	GRK5	P34947	590 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	UGT1A5	P35504	534 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	PSMB10	P40306	273 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	BUD31	P41223	144 aa	Predicted RBP	4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	AARS	P49588	968 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	HNMT	P50135	292 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	HK3	P52790	923 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	GP2	P55259	537 aa	Known RBP	4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	NXPH1	P58417	271 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	AP2B1	P63010	937 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	ATP2C1	P98194	919 aa	Predicted RBP	4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	SLC20A2	Q08357	652 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	NCBP1	Q09161	790 aa	Known RBP	4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	GALNT2	Q10471	571 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	CBX3	Q13185	183 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	NMI	Q13287	307 aa	Predicted RBP	4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	SMU1	Q2TAY7	513 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	MGAT5B	Q3V5L5	792 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	XKR3	Q5GH77	459 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	DEPDC1	Q5TB30	811 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	FYB2	Q5VWT5	728 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	MTFR2	Q6P444	385 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	RBM44	Q6ZP01	1051 aa	Known RBP	4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	RGS9BP	Q6ZS82	235 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	ANO5	Q75V66	913 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	H1FNT	Q75WM6	255 aa	Predicted RBP	4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	METTL23	Q86XA0	190 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	TMPRSS6	Q8IU80	811 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	TMEM151B	Q8IW70	566 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	SCN4B	Q8IWT1	228 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	SCML4	Q8N228	414 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	C17orf53	Q8N3J3	647 aa	Predicted RBP	4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	SLC25A45	Q8N413	288 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	NAT16	Q8N8M0	369 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	FAM162A	Q96A26	154 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	VPS33A	Q96AX1	596 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	ARSG	Q96EG1	525 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	SIPA1	Q96FS4	1042 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	P2RY11	Q96G91	374 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	ZNF396	Q96N95	335 aa	Predicted RBP	4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	CATSPER2	Q96P56	530 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	GBP5	Q96PP8	586 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	SLITRK1	Q96PX8	696 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	JPH2	Q9BR39	696 aa	Predicted RBP	4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	REEP2	Q9BRK0	252 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	ZPBP	Q9BS86	351 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	THUMPD3	Q9BV44	507 aa	Known RBP	4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	CCDC94	Q9BW85	323 aa	Predicted RBP	4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	ANO3	Q9BYT9	981 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	PABPC3	Q9H361	631 aa	Known RBP	4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	RNF41	Q9H4P4	317 aa	Predicted RBP	4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	DHX33	Q9H6R0	707 aa	Known RBP	4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	EBF2	Q9HAK2	575 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	BRF2	Q9HAW0	419 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	GDF3	Q9NR23	364 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	CATSPERZ	Q9NTU4	200 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	HSFX1	Q9UBD0	423 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	ANAPC5	Q9UJX4	755 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	EXOC7	Q9UPT5	735 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	TMED5	Q9Y3A6	229 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	TIMM13	Q9Y5L4	95 aa	Predicted RBP	4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	LYVE1	Q9Y5Y7	322 aa		4.24	□□□□□ -1.73
ATG7-208	ENST00000427759	TCHH	Q07283	1943 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	ABCA4	P78363	2273 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	TRAV19	A0A0A6YYK7	116 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	PRAMEF33	A0A0G2JMD5	474 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	CTAGE9	A4FU28	777 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	C2orf78	A6NCI8	922 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	NUDT19	A8MXV4	375 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	FAM47E-STBD1	D6RA91	191 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	LEFTY2	O00292	366 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	NVL	O15381	856 aa	Known RBP	4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	PROM1	O43490	865 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	CHMP2A	O43633	222 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	ASNA1	O43681	348 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	PRAMEF10	O60809	474 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	PHF2	O75151	1096 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	MTRF1	O75570	445 aa	Known RBP	4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	SMNDC1	O75940	238 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	CNTN5	O94779	1100 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	SORBS2	O94875	1100 aa	Known RBP	4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	METTL18	O95568	372 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	SEMA4F	O95754	770 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	TUBB4A	P04350	444 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	ITGB3	P05106	788 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	THBD	P07204	575 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	NFIC	P08651	508 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	CLEC2L	P0C7M8	214 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	RXRA	P19793	462 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	KEL	P23276	732 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	CD38	P28907	300 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	TPP2	P29144	1249 aa	Predicted RBP	4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	SKIV2L2	P42285	1042 aa	Known RBP	4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	ATP5O	P48047	213 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	PREP	P48147	710 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	NPEPPS	P55786	919 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	SLFN5	Q08AF3	891 aa		4.23	□□□□□ -1.73
ATG7-208	ENST00000427759	DMP1	Q13316	513 aa	Predicted RBP	4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms