RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.72□□□□□ -1.49
C9orf3-205ENST00000427193 TRAPPC11Q7Z392 1133 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 CHPFQ8IZ52 775 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 ARFGAP1Q8N6T3 406 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 LRRC52Q8N7C0 313 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 ZBTB34Q8NCN2 500 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 FBXL13Q8NEE6 735 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 ADAMTS15Q8TE58 950 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 SUSD6Q92537 303 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 RUBCNQ92622 972 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 TOP1MTQ969P6 601 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 JAKMIP2Q96AA8 810 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 CCDC127Q96BQ5 260 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 WDYHV1Q96HA8 205 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 CASD1Q96PB1 797 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 GAD1Q99259 594 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 CCDC94Q9BW85 323 aaPredicted RBP5.72□□□□□ -1.49
C9orf3-205ENST00000427193 B3GNT5Q9BYG0 378 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 MTMR12Q9C0I1 747 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 FAM124BQ9H5Z6 455 aaPredicted RBP5.72□□□□□ -1.49
C9orf3-205ENST00000427193 RPF1Q9H9Y2 349 aaKnown RBP5.72□□□□□ -1.49
C9orf3-205ENST00000427193 UBN1Q9NPG3 1134 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 RAB20Q9NX57 234 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 HEY2Q9UBP5 337 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 MYO6Q9UM54 1294 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 DAAM1Q9Y4D1 1078 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 LRP12Q9Y561 859 aa5.72□□□□□ -1.49
C9orf3-205ENST00000427193 DSPP15924 2871 aaKnown RBP5.72□□□□□ -1.49
C9orf3-205ENST00000427193 ANK1P16157 1881 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 PYCARD-AS1I3L0S3 204 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 RRP9O43818 475 aaKnown RBP5.71□□□□□ -1.5
C9orf3-205ENST00000427193 N4BP1O75113 896 aaKnown RBP5.71□□□□□ -1.5
C9orf3-205ENST00000427193 SERPINC1P01008 464 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 HLA-DRAP01903 254 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 DLATP10515 647 aaKnown RBP5.71□□□□□ -1.5
C9orf3-205ENST00000427193 KRT13P13646 458 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 UCHL3P15374 230 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 CD19P15391 556 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 MLH1P40692 756 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 ZNF132P52740 706 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 OSTNP61366 133 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 HSF1Q00613 529 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 UBXN1Q04323 297 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 DMWDQ09019 674 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 GRIK3Q13003 919 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 CAMK1Q14012 370 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 MEA1Q16626 185 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 UPP1Q16831 310 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 TPD52L1Q16890 204 aaPredicted RBP5.71□□□□□ -1.5
C9orf3-205ENST00000427193 C9orf57Q5W0N0 161 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 C9orf47Q6ZRZ4 202 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 KCTD20Q7Z5Y7 419 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 PIM3Q86V86 326 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 TMEM139Q8IV31 216 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 CCDC105Q8IYK2 499 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 RNF168Q8IYW5 571 aaPredicted RBP5.71□□□□□ -1.5
C9orf3-205ENST00000427193 DCLK2Q8N568 766 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 TC2NQ8N9U0 490 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 ANKRD20A12PQ8NF67 263 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 SHC3Q92529 594 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 TAF4BQ92750 862 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 SYN2Q92777 582 aaPredicted RBP5.71□□□□□ -1.5
C9orf3-205ENST00000427193 C18orf25Q96B23 403 aaPredicted RBP5.71□□□□□ -1.5
C9orf3-205ENST00000427193 IQCDQ96DY2 449 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 ZFYVE19Q96K21 471 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 TRMOQ9BU70 441 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 INTS2Q9H0H0 1204 aaKnown RBP5.71□□□□□ -1.5
C9orf3-205ENST00000427193 GDAP2Q9NXN4 497 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 DPP3Q9NY33 737 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 TUBGCP4Q9UGJ1 667 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 ITGA11Q9UKX5 1188 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 CAPN11Q9UMQ6 739 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 UBQLN1Q9UMX0 589 aaKnown RBP5.71□□□□□ -1.5
C9orf3-205ENST00000427193 NENFQ9UMX5 172 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 HS3ST3B1Q9Y662 390 aa5.71□□□□□ -1.5
C9orf3-205ENST00000427193 IGF2RP11717 2491 aa5.7□□□□□ -1.5
C9orf3-205ENST00000427193 CCDC187A0A096LP49 1063 aa5.7□□□□□ -1.5
C9orf3-205ENST00000427193 CAPN8A6NHC0 703 aa5.7□□□□□ -1.5
C9orf3-205ENST00000427193 FAM90A8PA6NJQ4 464 aa5.7□□□□□ -1.5
C9orf3-205ENST00000427193 A8MVJ9 347 aa5.7□□□□□ -1.5
C9orf3-205ENST00000427193 M0QZQ0 153 aa5.7□□□□□ -1.5
C9orf3-205ENST00000427193 AKAP10O43572 662 aa5.7□□□□□ -1.5
C9orf3-205ENST00000427193 RFPL1O75677 317 aa5.7□□□□□ -1.5
C9orf3-205ENST00000427193 DDHD2O94830 711 aa5.7□□□□□ -1.5
C9orf3-205ENST00000427193 GLP2RO95838 553 aa5.7□□□□□ -1.5
C9orf3-205ENST00000427193 TPM3P06753 285 aa5.7□□□□□ -1.5
C9orf3-205ENST00000427193 FAM90A13PP0C7W8 464 aa5.7□□□□□ -1.5
C9orf3-205ENST00000427193 FAM90A24PP0C7X0 464 aa5.7□□□□□ -1.5
C9orf3-205ENST00000427193 HARSP12081 509 aaKnown RBP5.7□□□□□ -1.5
C9orf3-205ENST00000427193 TNNI1P19237 187 aa5.7□□□□□ -1.5
C9orf3-205ENST00000427193 PAX3P23760 479 aa5.7□□□□□ -1.5
C9orf3-205ENST00000427193 ATICP31939 592 aa5.7□□□□□ -1.5
C9orf3-205ENST00000427193 RPL9P32969 192 aaKnown RBP5.7□□□□□ -1.5
C9orf3-205ENST00000427193 PRKCIP41743 596 aa5.7□□□□□ -1.5
C9orf3-205ENST00000427193 PTDSS1P48651 473 aaKnown RBP5.7□□□□□ -1.5
C9orf3-205ENST00000427193 THBS3P49746 956 aa5.7□□□□□ -1.5
C9orf3-205ENST00000427193 PGDP52209 483 aa5.7□□□□□ -1.5
C9orf3-205ENST00000427193 ARHGAP8P85298 464 aa5.7□□□□□ -1.5
C9orf3-205ENST00000427193 MYL7Q01449 175 aa5.7□□□□□ -1.5
C9orf3-205ENST00000427193 INCA1Q0VD86 236 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms