RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 FNDC1Q4ZHG4 1894 aaPredicted RBP13.3□□□□□ -0.28
USP42-203ENST00000426246 NR1H2P55055 460 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 ANKDD1AQ495B1 522 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 ATP6AP1LQ52LC2 224 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 INTS6LQ5JSJ4 861 aaKnown RBP13.3□□□□□ -0.28
USP42-203ENST00000426246 RAB41Q5JT25 222 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 BHLHA9Q7RTU4 235 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 GALNT10Q86SR1 603 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 ADCY4Q8NFM4 1077 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 ELMO1Q92556 727 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 SLC2A13Q96QE2 648 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 SCHIP1Q9P0W5 487 aaPredicted RBP13.3□□□□□ -0.28
USP42-203ENST00000426246 LIMD1Q9UGP4 676 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 COL4A6Q14031 1691 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 CEP290O15078 2479 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 CCDC154A6NI56 674 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 SMIM18P0DKX4 95 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 ELK4P28324 431 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 SQLEQ14534 574 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 POM121L1PQ3SYA9 428 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 PIK3R6Q5UE93 754 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 OGFOD2Q6N063 350 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 KIAA1841Q6NSI8 718 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 POTEHQ6S545 545 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 SLC22A15Q8IZD6 547 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 PNPT1Q8TCS8 783 aaKnown RBP13.3□□□□□ -0.28
USP42-203ENST00000426246 NT5C3BQ969T7 300 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 ULK4Q96C45 1275 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 AURKBQ96GD4 344 aaPredicted RBP13.3□□□□□ -0.28
USP42-203ENST00000426246 TEX37Q96LM6 180 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 SMIM31A0A1B0GVY4 71 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 NME4O00746 187 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 STX7O15400 261 aaKnown RBP13.3□□□□□ -0.28
USP42-203ENST00000426246 CDK14O94921 469 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 ALBP02768 609 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 ASLP04424 464 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 HMOX2P30519 316 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 NAA20P61599 178 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 HMGCS1Q01581 520 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 GNA12Q03113 381 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 LSAMPQ13449 338 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 KCTD11Q693B1 232 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 DENND5AQ6IQ26 1287 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 GLB1LQ6UWU2 654 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 RSPH1Q8WYR4 309 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 CSNK1G1Q9HCP0 422 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 CATSPERZQ9NTU4 200 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 FADS3Q9Y5Q0 445 aa13.3□□□□□ -0.28
USP42-203ENST00000426246 HTRA2O43464 458 aaPredicted RBP13.29□□□□□ -0.28
USP42-203ENST00000426246 DIRAS1O95057 198 aa13.29□□□□□ -0.28
USP42-203ENST00000426246 SELPP16109 830 aa13.29□□□□□ -0.28
USP42-203ENST00000426246 LIPEQ05469 1076 aa13.29□□□□□ -0.28
USP42-203ENST00000426246 MADCAM1Q13477 382 aa13.29□□□□□ -0.28
USP42-203ENST00000426246 ANKRD34AQ69YU3 496 aa13.29□□□□□ -0.28
USP42-203ENST00000426246 SPESP1Q6UW49 350 aa13.29□□□□□ -0.28
USP42-203ENST00000426246 CLEC14AQ86T13 490 aa13.29□□□□□ -0.28
USP42-203ENST00000426246 COLGALT2Q8IYK4 626 aa13.29□□□□□ -0.28
USP42-203ENST00000426246 PRICKLE1Q96MT3 831 aaPredicted RBP13.29□□□□□ -0.28
USP42-203ENST00000426246 CINPQ9BW66 212 aaPredicted RBP13.29□□□□□ -0.28
USP42-203ENST00000426246 GPR63Q9BZJ6 419 aa13.29□□□□□ -0.28
USP42-203ENST00000426246 IGSF5Q9NSI5 407 aa13.29□□□□□ -0.28
USP42-203ENST00000426246 SMOXQ9NWM0 555 aa13.29□□□□□ -0.28
USP42-203ENST00000426246 RNF11Q9Y3C5 154 aa13.29□□□□□ -0.28
USP42-203ENST00000426246 PKP3Q9Y446 797 aa13.29□□□□□ -0.28
USP42-203ENST00000426246 BOLA2-SMG1P6H3BVE0 249 aa13.29□□□□□ -0.28
USP42-203ENST00000426246 H2AFYO75367 372 aaKnown RBP13.29□□□□□ -0.28
USP42-203ENST00000426246 SERPINF2P08697 491 aa13.29□□□□□ -0.28
USP42-203ENST00000426246 CCNCP24863 283 aa13.29□□□□□ -0.28
USP42-203ENST00000426246 CDK18Q07002 472 aa13.29□□□□□ -0.28
USP42-203ENST00000426246 TECRLQ5HYJ1 363 aa13.29□□□□□ -0.28
USP42-203ENST00000426246 ANKS6Q68DC2 871 aa13.29□□□□□ -0.28
USP42-203ENST00000426246 GCNT7Q6ZNI0 430 aa13.29□□□□□ -0.28
USP42-203ENST00000426246 DET1Q7L5Y6 550 aa13.29□□□□□ -0.28
USP42-203ENST00000426246 CLYBLQ8N0X4 340 aa13.29□□□□□ -0.28
USP42-203ENST00000426246 LZTR1Q8N653 840 aa13.29□□□□□ -0.28
USP42-203ENST00000426246 SDCCAG3Q96C92 435 aa13.29□□□□□ -0.28
USP42-203ENST00000426246 ASB9Q96DX5 294 aa13.29□□□□□ -0.28
USP42-203ENST00000426246 UROC1Q96N76 676 aa13.29□□□□□ -0.28
USP42-203ENST00000426246 PRDM8Q9NQV8 689 aa13.29□□□□□ -0.28
USP42-203ENST00000426246 FKBPLQ9UIM3 349 aa13.29□□□□□ -0.28
USP42-203ENST00000426246 TRMT6Q9UJA5 497 aaKnown RBP13.29□□□□□ -0.28
USP42-203ENST00000426246 PNMA8BQ9ULN7 279 aaPredicted RBP13.29□□□□□ -0.28
USP42-203ENST00000426246 PCDHB9Q9Y5E1 797 aa13.29□□□□□ -0.28
USP42-203ENST00000426246 TMCC1O94876 653 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 IL1BP01584 269 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 IL7RP16871 459 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 CLCQ05315 142 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 ARHGEF6Q15052 776 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 PTRHD1Q6GMV3 140 aaKnown RBP13.28□□□□□ -0.28
USP42-203ENST00000426246 CILP2Q8IUL8 1156 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 DHRSXQ8N5I4 330 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 OR52B6Q8NGF0 335 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 OR2T34Q8NGX1 318 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 OR2T3Q8NH03 318 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 OR4L1Q8NH43 312 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 SUSD3Q96L08 255 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 PLEKHG4BQ96PX9 1271 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 BTBD9Q96Q07 612 aa13.28□□□□□ -0.28
USP42-203ENST00000426246 MRPS26Q9BYN8 205 aaKnown RBP13.28□□□□□ -0.28
USP42-203ENST00000426246 ATP13A1Q9HD20 1204 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms