RNA–Protein interactions for RNA: ENST00000425393.1

RAB3GAP1-202, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2 BASIC

Gene RAB3GAP1, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-202ENST00000425393 SOCS5O75159 536 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 GJB3O75712 270 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 PGM3O95394 542 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 ICAM1P05362 532 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 RB1P06400 928 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 SRPRAP08240 638 aaKnown RBP4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 CSH1P0DML2 217 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 CSH2P0DML3 217 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 ACTN1P12814 892 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 PORP16435 677 aaPredicted RBP4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 TMEM11P17152 192 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 RRM1P23921 792 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 APOBEC1P41238 236 aaKnown RBP4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 CAMPP49913 170 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 CLCNKAP51800 687 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 GALCP54803 685 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 CSNK2A1P68400 391 aaPredicted RBP4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 ACSM2AQ08AH3 577 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 EPS8Q12929 822 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 NAB2Q15742 525 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 ZNF805Q5CZA5 627 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 XKR9Q5GH70 373 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 RARS2Q5T160 578 aaKnown RBP4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 ACSM2BQ68CK6 577 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 BRAT1Q6PJG6 821 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 SLC36A4Q6YBV0 504 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 ATG9AQ7Z3C6 839 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 CSNK2A3Q8NEV1 391 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 LILRB1Q8NHL6 650 aaPredicted RBP4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 APBB2Q92870 758 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 ZKSCAN4Q969J2 545 aaPredicted RBP4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 TAAR8Q969N4 342 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 NODALQ96S42 347 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 CCDC68Q9H2F9 335 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 PLK3Q9H4B4 646 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 SWAP70Q9UH65 585 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 PADI3Q9ULW8 664 aa4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 TMEM184BQ9Y519 407 aaPredicted RBP4.81□□□□□ -1.64
RAB3GAP1-202ENST00000425393 HMGB1P1B2RPK0 211 aaPredicted RBP4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 M0QZ24 198 aa4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 MAP2K7O14733 419 aa4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 IGLV2-11P01706 119 aa4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 LDHCP07864 332 aa4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 LINC00271P0C7V0 271 aa4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 DAOP14920 347 aa4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 PON1P27169 355 aa4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 BDKRB2P30411 391 aa4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 ACSL1P33121 698 aa4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 PIK3CAP42336 1068 aa4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 PRCPP42785 496 aa4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 SPOCK1Q08629 439 aa4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 ZNF155Q12901 538 aaPredicted RBP4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 MYBPHQ13203 477 aa4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 CTF1Q16619 201 aa4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 PNLIPRP3Q17RR3 467 aa4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 FAM122CQ6P4D5 195 aa4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 C16orf54Q6UWD8 224 aa4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 MEX3BQ6ZN04 569 aaKnown RBP4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 NCAPGQ9BPX3 1015 aa4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 KXD1Q9BQD3 176 aa4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 FTOQ9C0B1 505 aaKnown RBP eCLIP4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 PIGMQ9H3S5 423 aa4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 TCF7L2Q9NQB0 619 aa4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 WSB2Q9NYS7 404 aaPredicted RBP4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 ZNF224Q9NZL3 707 aa4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 COPG2Q9UBF2 871 aa4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 ZNF215Q9UL58 517 aaPredicted RBP4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 NFS1Q9Y697 457 aa4.8□□□□□ -1.64
RAB3GAP1-202ENST00000425393 KANSL1LA0AUZ9 987 aa4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 SMAD9O15198 467 aaKnown RBP4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 MID1O15344 667 aa4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 PAPSS1O43252 624 aaPredicted RBP4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 SPINT2O43291 252 aa4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 AHCYL1O43865 530 aa4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 HS6ST1O60243 411 aa4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 CLDN14O95500 239 aa4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 EGFP01133 1207 aa4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 F7P08709 466 aaPredicted RBP4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 UGT1A1P22309 533 aa4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 GPR143P51810 404 aa4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 SREBF2Q12772 1141 aa4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 DLG1Q12959 904 aa4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 PDE1CQ14123 709 aaPredicted RBP4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 WTAPQ15007 396 aa4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 CALCRLQ16602 461 aa4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 DUS1LQ6P1R4 473 aaKnown RBP4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 WDR73Q6P4I2 378 aa4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 PAPD4Q6PIY7 484 aaKnown RBP4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 LRRC59Q96AG4 307 aaKnown RBP4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 ADGRG7Q96K78 797 aa4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 CSF3RQ99062 836 aa4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 SRSF8Q9BRL6 282 aaKnown RBP4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 C1QTNF1Q9BXJ1 281 aa4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 SMARCAL1Q9NZC9 954 aa4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 ADD3Q9UEY8 706 aaKnown RBP4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 OR14J1Q9UGF5 321 aa4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 SEC63Q9UGP8 760 aaKnown RBP4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 EXO1Q9UQ84 846 aaKnown RBP4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 CMAHPQ9Y471 501 aa4.79□□□□□ -1.64
RAB3GAP1-202ENST00000425393 PASKQ96RG2 1323 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms