RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 SMTNL2Q2TAL5 461 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 TRIM74Q86UV6 250 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 PPP1R3BQ86XI6 285 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 PGBD5Q8N414 524 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 AOPEPQ8N6M6 819 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 KCTD6Q8NC69 237 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 CCNYQ8ND76 341 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 LPCAT1Q8NF37 534 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 CXorf40BQ96DE9 158 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 COX14Q96I36 57 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 C9orf72Q96LT7 481 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 OR6C1Q96RD1 312 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 PEBP4Q96S96 227 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 SPATA16Q9BXB7 569 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 SPRY4Q9C004 299 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 XPO4Q9C0E2 1151 aaKnown RBP12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 TWSG1Q9GZX9 223 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 TRIM39Q9HCM9 518 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 TAS2R14Q9NYV8 317 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 TP53TG5Q9Y2B4 290 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 KCNMB2Q9Y691 235 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 UNC13CQ8NB66 2214 aa12.13□□□□□ -0.47
HLA-DQB3-203ENST00000425319 CHD5Q8TDI0 1954 aa12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 CDC14CA4D256 554 aa12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 PDZK1P1A8MUH7 402 aa12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 ATMINO43313 823 aaPredicted RBP12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 MAP3K7O43318 606 aa12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 NUAK1O60285 661 aa12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 FZD6O60353 706 aa12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 KCNJ13O60928 360 aa12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 DNAJC6O75061 913 aa12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 OAS2P29728 719 aaKnown RBP12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 GARSP41250 739 aaKnown RBP12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 SPINT3P49223 89 aa12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 GTF2H3Q13889 308 aa12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 TDRD12Q587J7 1177 aaKnown RBP12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 ODF2Q5BJF6 829 aa12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 CACHD1Q5VU97 1274 aa12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 TIPARPQ7Z3E1 657 aaKnown RBP12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 TEX26Q8N6G2 289 aa12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 ARFGAP1Q8N6T3 406 aa12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 THAP4Q8WY91 577 aa12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 PMEPA1Q969W9 287 aa12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 TGM7Q96PF1 710 aa12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 FCRL4Q96PJ5 515 aa12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 ZSCAN5AQ9BUG6 496 aa12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 APMAPQ9HDC9 416 aa12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 KLC4Q9NSK0 619 aa12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 AIPL1Q9NZN9 384 aa12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 LCMT1Q9UIC8 334 aa12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 LNPEPQ9UIQ6 1025 aa12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 PRKAB1Q9Y478 270 aa12.12□□□□□ -0.47
HLA-DQB3-203ENST00000425319 COL27A1Q8IZC6 1860 aaPredicted RBP12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 BLACEA4D250 179 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 LRRC53A6NM62 1247 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 ANKRD66B4E2M5 251 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 C21orf140B9A014 251 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 MTSS1O43312 755 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 CREG1O75629 220 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 KIAA0754O94854 1291 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 PEX11BO96011 259 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 TYRP1P17643 537 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 SEPHS1P49903 392 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 ACY1Q03154 408 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 PDK2Q15119 407 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 NFKBIBQ15653 356 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 ZNF569Q5MCW4 686 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 PDPK2PQ6A1A2 396 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 TMEM26Q6ZUK4 368 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 LRRTM4Q86VH4 590 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 SIDT2Q8NBJ9 832 aaKnown RBP12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 BRSK1Q8TDC3 778 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 PTCD2Q8WV60 388 aaKnown RBP12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 PLEKHG4BQ96PX9 1271 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 LYSMD1Q96S90 227 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 AGAP2Q99490 1192 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 TBC1D10AQ9BXI6 508 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 GPR87Q9BY21 358 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 ZFYVE1Q9HBF4 777 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 PCDH18Q9HCL0 1135 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 ACSS2Q9NR19 701 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 POT1Q9NUX5 634 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 CROTQ9UKG9 612 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 RARRES3Q9UL19 164 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 PLAAQ9Y263 795 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 ST14Q9Y5Y6 855 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 KIF26BQ2KJY2 2108 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 MYO18BQ8IUG5 2567 aa12.11□□□□□ -0.47
HLA-DQB3-203ENST00000425319 CFAP46Q8IYW2 2715 aa12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 VEGFDO43915 354 aa12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 DLGAP3O95886 979 aa12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 C9P02748 559 aa12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 KLK3P07288 261 aaPredicted RBP12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 CD97P48960 835 aa12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 TPM4P67936 248 aa12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 DSC2Q02487 901 aa12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 ARMC6Q6NXE6 501 aa12.1□□□□□ -0.47
HLA-DQB3-203ENST00000425319 LURAP1LQ8IV03 231 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms