RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 C12orf65Q9H3J6 166 aaKnown RBP13.33□□□□□ -0.28
PRPF39-202ENST00000424478 SARS2Q9NP81 518 aaKnown RBP13.33□□□□□ -0.28
PRPF39-202ENST00000424478 MRPL40Q9NQ50 206 aaKnown RBP13.33□□□□□ -0.28
PRPF39-202ENST00000424478 TXNDC16Q9P2K2 825 aa13.33□□□□□ -0.28
PRPF39-202ENST00000424478 CNOT6Q9ULM6 557 aaKnown RBP13.33□□□□□ -0.28
PRPF39-202ENST00000424478 ANKRD12Q6UB98 2062 aa13.33□□□□□ -0.28
PRPF39-202ENST00000424478 LRRC72A6NJI9 287 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 MAP2K7O14733 419 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 LATO43561 262 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 NFKBIAP25963 317 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 CACNG1Q06432 222 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 PLA2G4EQ3MJ16 856 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 SNX20Q7Z614 316 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 DTWD2Q8NBA8 298 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 C2CD4AQ8NCU7 369 aaPredicted RBP13.32□□□□□ -0.28
PRPF39-202ENST00000424478 LKAAEAR1Q8TD35 194 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 CDKL2Q92772 493 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 NDUFS2O75306 463 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 NIPSNAP2O75323 286 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 NDUFS3O75489 264 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 ZNF542PQ5EBM4 170 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 PPM1JQ5JR12 505 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 PRAMEF14Q5SWL7 426 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 NXPE1Q8N323 547 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 PLEKHG4BQ96PX9 1271 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 RUFY1Q96T51 708 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 MOSPD1Q9UJG1 213 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 APPL1Q9UKG1 709 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 SLC39A10Q9ULF5 831 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.32□□□□□ -0.28
PRPF39-202ENST00000424478 IKBKGQ9Y6K9 419 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 ZNF318Q5VUA4 2279 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 H7C0S8 307 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 PHGDHO43175 533 aaKnown RBP13.32□□□□□ -0.28
PRPF39-202ENST00000424478 SPAG6O75602 509 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 ASMTLO95671 621 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 AVPR2P30518 371 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 STAT4Q14765 748 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 KLHL38Q2WGJ6 581 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 MRNIPQ6NTE8 343 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 PNCKQ6P2M8 343 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 ZC3HC1Q86WB0 502 aaKnown RBP13.32□□□□□ -0.28
PRPF39-202ENST00000424478 CENPTQ96BT3 561 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 VPS39Q96JC1 886 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 SLC6A18Q96N87 628 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 OR2AG1Q9H205 316 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 PREBQ9HCU5 417 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 TM7SF3Q9NS93 570 aa13.32□□□□□ -0.28
PRPF39-202ENST00000424478 TRIM49D1C9J1S8 452 aa13.31□□□□□ -0.28
PRPF39-202ENST00000424478 ACRV1P26436 265 aa13.31□□□□□ -0.28
PRPF39-202ENST00000424478 PBLDP30039 288 aaPredicted RBP13.31□□□□□ -0.28
PRPF39-202ENST00000424478 CTSCP53634 463 aa13.31□□□□□ -0.28
PRPF39-202ENST00000424478 CDKN2DP55273 166 aa13.31□□□□□ -0.28
PRPF39-202ENST00000424478 CCDC15Q0P6D6 951 aa13.31□□□□□ -0.28
PRPF39-202ENST00000424478 CRTC3Q6UUV7 619 aa13.31□□□□□ -0.28
PRPF39-202ENST00000424478 SLC26A11Q86WA9 606 aa13.31□□□□□ -0.28
PRPF39-202ENST00000424478 CEP97Q8IW35 865 aa13.31□□□□□ -0.28
PRPF39-202ENST00000424478 C4orf33Q8N1A6 199 aa13.31□□□□□ -0.28
PRPF39-202ENST00000424478 CAMKK1Q8N5S9 505 aa13.31□□□□□ -0.28
PRPF39-202ENST00000424478 SLC30A3Q99726 388 aa13.31□□□□□ -0.28
PRPF39-202ENST00000424478 OLFM1Q99784 485 aa13.31□□□□□ -0.28
PRPF39-202ENST00000424478 SGK2Q9HBY8 427 aa13.31□□□□□ -0.28
PRPF39-202ENST00000424478 TMEM202A6NGA9 273 aa13.31□□□□□ -0.28
PRPF39-202ENST00000424478 TNFRSF10AO00220 468 aa13.31□□□□□ -0.28
PRPF39-202ENST00000424478 ITGA2BP08514 1039 aa13.31□□□□□ -0.28
PRPF39-202ENST00000424478 LAMB3Q13751 1172 aa13.31□□□□□ -0.28
PRPF39-202ENST00000424478 DCLK2Q8N568 766 aa13.31□□□□□ -0.28
PRPF39-202ENST00000424478 LILRA3Q8N6C8 439 aaPredicted RBP13.31□□□□□ -0.28
PRPF39-202ENST00000424478 LPGAT1Q92604 370 aa13.31□□□□□ -0.28
PRPF39-202ENST00000424478 GLYATL1Q969I3 302 aa13.31□□□□□ -0.28
PRPF39-202ENST00000424478 ELMO2Q96JJ3 720 aa13.31□□□□□ -0.28
PRPF39-202ENST00000424478 SERAC1Q96JX3 654 aa13.31□□□□□ -0.28
PRPF39-202ENST00000424478 RBBP8Q99708 897 aa13.31□□□□□ -0.28
PRPF39-202ENST00000424478 FAM167BQ9BTA0 163 aa13.31□□□□□ -0.28
PRPF39-202ENST00000424478 PNMA8BQ9ULN7 279 aaPredicted RBP13.31□□□□□ -0.28
PRPF39-202ENST00000424478 PSMD11O00231 422 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 ZNF217O75362 1048 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 FUCA1P04066 466 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 TDGF1P13385 188 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 USP39Q53GS9 565 aaKnown RBP13.3□□□□□ -0.28
PRPF39-202ENST00000424478 CTSL3PQ5NE16 218 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 KIAA0895LQ68EN5 471 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 KIAA1161Q6NSJ0 714 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 RD3Q7Z3Z2 195 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 CNTN4Q8IWV2 1026 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 BMFQ96LC9 184 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 SRPK1Q96SB4 655 aaKnown RBP13.3□□□□□ -0.28
PRPF39-202ENST00000424478 FSCN3Q9NQT6 498 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 RUVBL2Q9Y230 463 aaKnown RBP13.3□□□□□ -0.28
PRPF39-202ENST00000424478 HRO43593 1189 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 GSTA2P09210 222 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 KRT15P19012 456 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 GP5P40197 560 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 CD151P48509 253 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 SUOXP51687 545 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 TTMPQ5BVD1 217 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 SDCCAG8Q86SQ7 713 aaPredicted RBP13.3□□□□□ -0.28
PRPF39-202ENST00000424478 SRRM1Q8IYB3 904 aaKnown RBP13.3□□□□□ -0.28
PRPF39-202ENST00000424478 RGL4Q8IZJ4 473 aa13.3□□□□□ -0.28
PRPF39-202ENST00000424478 TRAM1L1Q8N609 369 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms