RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 PPP6CO00743 305 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 OGTO15294 1046 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 TSPAN3O60637 253 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 AGFG2O95081 481 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 SNUPNO95149 360 aaKnown RBP5.05□□□□□ -1.6
SFXN1-202ENST00000421887 FKBP9O95302 570 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 OLFM2O95897 454 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 OAS1P00973 400 aaKnown RBP5.05□□□□□ -1.6
SFXN1-202ENST00000421887 IGHDP01880 384 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 DNTTP04053 509 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 HNRNPCP07910 306 aaKnown RBP eCLIP5.05□□□□□ -1.6
SFXN1-202ENST00000421887 CPA1P15085 419 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 FPR1P21462 350 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 PDIA3P30101 505 aaKnown RBP5.05□□□□□ -1.6
SFXN1-202ENST00000421887 KRT2P35908 639 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 MAGEA11P43364 429 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 TRAPPC10P48553 1259 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 NOP14P78316 857 aaKnown RBP5.05□□□□□ -1.6
SFXN1-202ENST00000421887 FAPQ12884 760 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 TAF10Q12962 218 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 CD300EQ496F6 205 aaPredicted RBP5.05□□□□□ -1.6
SFXN1-202ENST00000421887 ATP13A4Q4VNC1 1196 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 CEP78Q5JTW2 689 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 HECTD3Q5T447 861 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 FKBP9P1Q75LS8 142 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 PDCL2Q8N4E4 241 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 JPH3Q8WXH2 748 aaPredicted RBP5.05□□□□□ -1.6
SFXN1-202ENST00000421887 GTF3C6Q969F1 213 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 GRAMD1AQ96CP6 724 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 JAKMIP1Q96N16 626 aaKnown RBP5.05□□□□□ -1.6
SFXN1-202ENST00000421887 SLC46A1Q96NT5 459 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 ASB7Q9H672 318 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 SGK2Q9HBY8 427 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 LANCL2Q9NS86 450 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 SEPT10Q9P0V9 454 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 THAP10Q9P2Z0 257 aaPredicted RBP5.05□□□□□ -1.6
SFXN1-202ENST00000421887 IP6K2Q9UHH9 426 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 DNM3Q9UQ16 869 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 LUC7L2Q9Y383 392 aaKnown RBP5.05□□□□□ -1.6
SFXN1-202ENST00000421887 C2CD2Q9Y426 696 aa5.05□□□□□ -1.6
SFXN1-202ENST00000421887 ZFC3H1O60293 1989 aaKnown RBP5.04□□□□□ -1.6
SFXN1-202ENST00000421887 CLEC18AA5D8T8 446 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 TARM1B6A8C7 271 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 COCHO43405 550 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 MAGEC1O60732 1142 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 ULK1O75385 1050 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 RFPL1O75677 317 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 PRKD3O94806 890 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 TNFSF15O95150 251 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 KRT19P08727 400 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 THEGLP0DJG4 465 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 MYBL2P10244 700 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 BDNFP23560 247 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 YWHAQP27348 245 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 PSMA5P28066 241 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 DUSP3P51452 185 aaPredicted RBP5.04□□□□□ -1.6
SFXN1-202ENST00000421887 ZNF134P52741 427 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 COPAP53621 1224 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 ZBTB16Q05516 673 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 STK3Q13188 491 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 LAMB3Q13751 1172 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 ZNF234Q14588 700 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 RABEP1Q15276 862 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 UGT8Q16880 541 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 FAM180AQ6UWF9 173 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 CLEC18BQ6UXF7 455 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 ADGRF2Q8IZF7 708 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 CLEC18CQ8NCF0 446 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 OR2T3Q8NH03 318 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 ZNF564Q8TBZ8 553 aaPredicted RBP5.04□□□□□ -1.6
SFXN1-202ENST00000421887 MAPK15Q8TD08 544 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 FBXO32Q969P5 355 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 MOCOSQ96EN8 888 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 NTPCRQ9BSD7 190 aaKnown RBP5.04□□□□□ -1.6
SFXN1-202ENST00000421887 TIPINQ9BVW5 301 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 CIPCQ9C0C6 399 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 VPS16Q9H269 839 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 ADNPQ9H2P0 1102 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 ERVMER34-1Q9H9K5 563 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 DDX19AQ9NUU7 478 aaKnown RBP5.04□□□□□ -1.6
SFXN1-202ENST00000421887 PLK2Q9NYY3 685 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 LARSQ9P2J5 1176 aaKnown RBP5.04□□□□□ -1.6
SFXN1-202ENST00000421887 SERGEFQ9UGK8 458 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 ANAPC2Q9UJX6 822 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 AJAP1Q9UKB5 411 aaPredicted RBP5.04□□□□□ -1.6
SFXN1-202ENST00000421887 PLA2G4CQ9UP65 541 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 RUVBL1Q9Y265 456 aaKnown RBP5.04□□□□□ -1.6
SFXN1-202ENST00000421887 SNX9Q9Y5X1 595 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 ACTL7AQ9Y615 435 aa5.04□□□□□ -1.6
SFXN1-202ENST00000421887 KIF26BQ2KJY2 2108 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 PRAMEF33A0A0G2JMD5 474 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 A0A1W2PS29 197 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 VPS37CA5D8V6 355 aaPredicted RBP5.03□□□□□ -1.6
SFXN1-202ENST00000421887 LRRC72A6NJI9 287 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 F8VP50 259 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 TLR4O00206 839 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 TIMM44O43615 452 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 CREB3O43889 395 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 PRAMEF10O60809 474 aa5.03□□□□□ -1.6
SFXN1-202ENST00000421887 SDC3O75056 442 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms